RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 IGKV6D-21A0A0A0MT36 114 aa23.24■■□□□ 1.31
SND1-214ENST00000489417 NPHP3-ACAD11A0A0J9YXS1 232 aa23.24■■□□□ 1.31
SND1-214ENST00000489417 GH1P01241 217 aa23.24■■□□□ 1.31
SND1-214ENST00000489417 YWHABP31946 246 aaKnown RBP23.24■■□□□ 1.31
SND1-214ENST00000489417 TMEM63BQ5T3F8 832 aa23.24■■□□□ 1.31
SND1-214ENST00000489417 RINT1Q6NUQ1 792 aa23.24■■□□□ 1.31
SND1-214ENST00000489417 GPR20Q99678 358 aa23.24■■□□□ 1.31
SND1-214ENST00000489417 ZNF302Q9NR11 478 aa23.24■■□□□ 1.31
SND1-214ENST00000489417 LOXHD1Q8IVV2 1947 aa23.23■■□□□ 1.31
SND1-214ENST00000489417 NOP56O00567 594 aaKnown RBP23.23■■□□□ 1.31
SND1-214ENST00000489417 ZNF862O60290 1169 aa23.23■■□□□ 1.31
SND1-214ENST00000489417 ARHGAP1Q07960 439 aa23.23■■□□□ 1.31
SND1-214ENST00000489417 LAMC2Q13753 1193 aa23.23■■□□□ 1.31
SND1-214ENST00000489417 GIT2Q14161 759 aa23.23■■□□□ 1.31
SND1-214ENST00000489417 IQCB1Q15051 598 aa23.23■■□□□ 1.31
SND1-214ENST00000489417 IQSEC1Q6DN90 963 aa23.23■■□□□ 1.31
SND1-214ENST00000489417 CCDC65Q8IXS2 484 aa23.23■■□□□ 1.31
SND1-214ENST00000489417 CCDC43Q96MW1 224 aaKnown RBP23.23■■□□□ 1.31
SND1-214ENST00000489417 SPATA33Q96N06 139 aa23.23■■□□□ 1.31
SND1-214ENST00000489417 KCND2Q9NZV8 630 aa23.23■■□□□ 1.31
SND1-214ENST00000489417 IGHA2P01877 340 aa23.22■■□□□ 1.31
SND1-214ENST00000489417 XRCC5P13010 732 aaKnown RBP23.22■■□□□ 1.31
SND1-214ENST00000489417 TCF7P36402 384 aaPredicted RBP23.22■■□□□ 1.31
SND1-214ENST00000489417 RARRES1P49788 294 aa23.22■■□□□ 1.31
SND1-214ENST00000489417 PRKCEQ02156 737 aa23.22■■□□□ 1.31
SND1-214ENST00000489417 UVSSAQ2YD98 709 aa23.22■■□□□ 1.31
SND1-214ENST00000489417 FAM160B1Q5W0V3 765 aa23.22■■□□□ 1.31
SND1-214ENST00000489417 C1orf186Q6ZWK4 172 aa23.22■■□□□ 1.31
SND1-214ENST00000489417 LUZP1Q86V48 1076 aa23.22■■□□□ 1.31
SND1-214ENST00000489417 SMYD4Q8IYR2 804 aaPredicted RBP23.22■■□□□ 1.31
SND1-214ENST00000489417 PANK4Q9NVE7 773 aa23.22■■□□□ 1.31
SND1-214ENST00000489417 GABRQQ9UN88 632 aa23.22■■□□□ 1.31
SND1-214ENST00000489417 GDAQ9Y2T3 454 aa23.22■■□□□ 1.31
SND1-214ENST00000489417 MAFBQ9Y5Q3 323 aaPredicted RBP23.22■■□□□ 1.31
SND1-214ENST00000489417 DOCK3Q8IZD9 2030 aa23.22■■□□□ 1.31
SND1-214ENST00000489417 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.21■■□□□ 1.31
SND1-214ENST00000489417 FRMD3A2A2Y4 597 aa23.21■■□□□ 1.31
SND1-214ENST00000489417 NKRFO15226 690 aaKnown RBP eCLIP23.21■■□□□ 1.31
SND1-214ENST00000489417 STBD1O95210 358 aa23.21■■□□□ 1.31
SND1-214ENST00000489417 CYP2C19P33261 490 aa23.21■■□□□ 1.31
SND1-214ENST00000489417 CACNB1Q02641 598 aaPredicted RBP23.21■■□□□ 1.31
SND1-214ENST00000489417 RAD51AP2Q09MP3 1159 aa23.21■■□□□ 1.31
SND1-214ENST00000489417 COASYQ13057 564 aa23.21■■□□□ 1.31
SND1-214ENST00000489417 CCDC144BQ3MJ40 725 aa23.21■■□□□ 1.31
SND1-214ENST00000489417 HSDL1Q3SXM5 330 aa23.21■■□□□ 1.31
SND1-214ENST00000489417 DUSP28Q4G0W2 176 aa23.21■■□□□ 1.31
SND1-214ENST00000489417 CT47A1Q5JQC4 288 aaPredicted RBP23.21■■□□□ 1.31
SND1-214ENST00000489417 PADI6Q6TGC4 694 aa23.21■■□□□ 1.31
SND1-214ENST00000489417 OTUD6AQ7L8S5 288 aa23.21■■□□□ 1.31
SND1-214ENST00000489417 AOPEPQ8N6M6 819 aa23.21■■□□□ 1.31
SND1-214ENST00000489417 AFAP1L1Q8TED9 768 aa23.21■■□□□ 1.31
SND1-214ENST00000489417 PCYT2Q99447 389 aa23.21■■□□□ 1.31
SND1-214ENST00000489417 REEP2Q9BRK0 252 aa23.21■■□□□ 1.31
SND1-214ENST00000489417 BECN2A8MW95 431 aa23.2■■□□□ 1.3
SND1-214ENST00000489417 PPP1R3GB7ZBB8 358 aa23.2■■□□□ 1.3
SND1-214ENST00000489417 CD44P16070 742 aaKnown RBP23.2■■□□□ 1.3
SND1-214ENST00000489417 SMPD1P17405 629 aa23.2■■□□□ 1.3
SND1-214ENST00000489417 FLT3LGP49771 235 aa23.2■■□□□ 1.3
SND1-214ENST00000489417 EHHADHQ08426 723 aa23.2■■□□□ 1.3
SND1-214ENST00000489417 PSMD2Q13200 908 aa23.2■■□□□ 1.3
SND1-214ENST00000489417 XKR9Q5GH70 373 aa23.2■■□□□ 1.3
SND1-214ENST00000489417 XKR3Q5GH77 459 aa23.2■■□□□ 1.3
SND1-214ENST00000489417 PRAMEF19Q5SWL8 479 aa23.2■■□□□ 1.3
SND1-214ENST00000489417 GJC2Q5T442 439 aaPredicted RBP23.2■■□□□ 1.3
SND1-214ENST00000489417 UTP14CQ5TAP6 766 aaKnown RBP23.2■■□□□ 1.3
SND1-214ENST00000489417 PLA2G4FQ68DD2 849 aa23.2■■□□□ 1.3
SND1-214ENST00000489417 ANO5Q75V66 913 aa23.2■■□□□ 1.3
SND1-214ENST00000489417 DHX40Q8IX18 779 aaKnown RBP23.2■■□□□ 1.3
SND1-214ENST00000489417 EMID1Q96A84 441 aaPredicted RBP23.2■■□□□ 1.3
SND1-214ENST00000489417 TMEM150BA6NC51 233 aa23.19■■□□□ 1.3
SND1-214ENST00000489417 GPR25O00155 361 aa23.19■■□□□ 1.3
SND1-214ENST00000489417 TBCAO75347 108 aaKnown RBP23.19■■□□□ 1.3
SND1-214ENST00000489417 LGR5O75473 907 aa23.19■■□□□ 1.3
SND1-214ENST00000489417 ZNF865P0CJ78 1059 aaPredicted RBP23.19■■□□□ 1.3
SND1-214ENST00000489417 PTGS1P23219 599 aa23.19■■□□□ 1.3
SND1-214ENST00000489417 GUCY2CP25092 1073 aa23.19■■□□□ 1.3
SND1-214ENST00000489417 STAT5BP51692 787 aa23.19■■□□□ 1.3
SND1-214ENST00000489417 PRKCZQ05513 592 aa23.19■■□□□ 1.3
SND1-214ENST00000489417 AZI2Q9H6S1 392 aa23.19■■□□□ 1.3
SND1-214ENST00000489417 SAGE1Q9NXZ1 904 aa23.19■■□□□ 1.3
SND1-214ENST00000489417 WDR81Q562E7 1941 aa23.18■■□□□ 1.3
SND1-214ENST00000489417 OATP04181 439 aa23.18■■□□□ 1.3
SND1-214ENST00000489417 ATP4AP20648 1035 aa23.18■■□□□ 1.3
SND1-214ENST00000489417 ERCC5P28715 1186 aaPredicted RBP23.18■■□□□ 1.3
SND1-214ENST00000489417 CAP1Q01518 475 aa23.18■■□□□ 1.3
SND1-214ENST00000489417 TNFAIP2Q03169 654 aa23.18■■□□□ 1.3
SND1-214ENST00000489417 STK4Q13043 487 aa23.18■■□□□ 1.3
SND1-214ENST00000489417 TRMT1LQ7Z2T5 733 aaKnown RBP23.18■■□□□ 1.3
SND1-214ENST00000489417 CD99L2Q8TCZ2 262 aa23.18■■□□□ 1.3
SND1-214ENST00000489417 SEPT9Q9UHD8 586 aaPredicted RBP23.18■■□□□ 1.3
SND1-214ENST00000489417 EMSYQ7Z589 1322 aa23.18■■□□□ 1.3
SND1-214ENST00000489417 SMTNL1A8MU46 457 aa23.17■■□□□ 1.3
SND1-214ENST00000489417 GOLGA6L19H0YKK7 550 aa23.17■■□□□ 1.3
SND1-214ENST00000489417 IKBKBO14920 756 aa23.17■■□□□ 1.3
SND1-214ENST00000489417 PRCPP42785 496 aa23.17■■□□□ 1.3
SND1-214ENST00000489417 NPEPPSP55786 919 aa23.17■■□□□ 1.3
SND1-214ENST00000489417 MYL5Q02045 173 aa23.17■■□□□ 1.3
SND1-214ENST00000489417 STIM1Q13586 685 aa23.17■■□□□ 1.3
SND1-214ENST00000489417 COBLL1Q53SF7 1204 aa23.17■■□□□ 1.3
SND1-214ENST00000489417 HERC4Q5GLZ8 1057 aaPredicted RBP23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms