RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 NFATC3Q12968 1075 aa5.46□□□□□ -1.54
RFC4-213ENST00000489028 TMEM132BQ14DG7 1078 aa5.46□□□□□ -1.54
RFC4-213ENST00000489028 SKOR2Q2VWA4 1001 aaPredicted RBP5.46□□□□□ -1.54
RFC4-213ENST00000489028 UBXN11Q5T124 520 aa5.46□□□□□ -1.54
RFC4-213ENST00000489028 CREB3L3Q68CJ9 461 aa5.46□□□□□ -1.54
RFC4-213ENST00000489028 Q6ZUG5 572 aa5.46□□□□□ -1.54
RFC4-213ENST00000489028 SYNPOQ8N3V7 929 aa5.46□□□□□ -1.54
RFC4-213ENST00000489028 BDH2Q9BUT1 245 aa5.46□□□□□ -1.54
RFC4-213ENST00000489028 INCENPQ9NQS7 918 aa5.46□□□□□ -1.54
RFC4-213ENST00000489028 UCKL1Q9NWZ5 548 aa5.46□□□□□ -1.54
RFC4-213ENST00000489028 MAGEC2Q9UBF1 373 aaPredicted RBP5.46□□□□□ -1.54
RFC4-213ENST00000489028 PTPDC1A2A3K4 754 aa5.45□□□□□ -1.54
RFC4-213ENST00000489028 SDHAP31040 664 aa5.45□□□□□ -1.54
RFC4-213ENST00000489028 CSF2RBP32927 897 aa5.45□□□□□ -1.54
RFC4-213ENST00000489028 KIAA2012Q0VF49 1180 aa5.45□□□□□ -1.54
RFC4-213ENST00000489028 KIAA0907Q7Z7F0 614 aaPredicted RBP5.45□□□□□ -1.54
RFC4-213ENST00000489028 DHX37Q8IY37 1157 aaKnown RBP5.45□□□□□ -1.54
RFC4-213ENST00000489028 KLHL36Q8N4N3 616 aa5.45□□□□□ -1.54
RFC4-213ENST00000489028 NINJ1Q92982 152 aa5.45□□□□□ -1.54
RFC4-213ENST00000489028 FOXRED1Q96CU9 486 aaPredicted RBP5.45□□□□□ -1.54
RFC4-213ENST00000489028 GBP4Q96PP9 640 aa5.45□□□□□ -1.54
RFC4-213ENST00000489028 MTFR1LQ9H019 292 aa5.45□□□□□ -1.54
RFC4-213ENST00000489028 GALNT8Q9NY28 637 aa5.45□□□□□ -1.54
RFC4-213ENST00000489028 ADAM29Q9UKF5 820 aa5.45□□□□□ -1.54
RFC4-213ENST00000489028 PTPN22Q9Y2R2 807 aa5.45□□□□□ -1.54
RFC4-213ENST00000489028 PRAMEF22A3QJZ6 481 aa5.44□□□□□ -1.54
RFC4-213ENST00000489028 H0Y858 1186 aa5.44□□□□□ -1.54
RFC4-213ENST00000489028 KPNA6O60684 536 aa5.44□□□□□ -1.54
RFC4-213ENST00000489028 SYN1P17600 705 aa5.44□□□□□ -1.54
RFC4-213ENST00000489028 STILQ15468 1287 aa5.44□□□□□ -1.54
RFC4-213ENST00000489028 CFAP100Q494V2 611 aa5.44□□□□□ -1.54
RFC4-213ENST00000489028 TBC1D10BQ4KMP7 808 aaPredicted RBP5.44□□□□□ -1.54
RFC4-213ENST00000489028 DALRD3Q5D0E6 543 aaKnown RBP5.44□□□□□ -1.54
RFC4-213ENST00000489028 GIMAP6Q6P9H5 292 aa5.44□□□□□ -1.54
RFC4-213ENST00000489028 GPR155Q7Z3F1 870 aa5.44□□□□□ -1.54
RFC4-213ENST00000489028 NOP9Q86U38 636 aaKnown RBP5.44□□□□□ -1.54
RFC4-213ENST00000489028 RTN4RL1Q86UN2 441 aaPredicted RBP5.44□□□□□ -1.54
RFC4-213ENST00000489028 KBTBD2Q8IY47 623 aa5.44□□□□□ -1.54
RFC4-213ENST00000489028 LGI4Q8N135 537 aa5.44□□□□□ -1.54
RFC4-213ENST00000489028 AJUBAQ96IF1 538 aa5.44□□□□□ -1.54
RFC4-213ENST00000489028 RBM15Q96T37 977 aaKnown RBP eCLIP5.44□□□□□ -1.54
RFC4-213ENST00000489028 INTS7Q9NVH2 962 aaKnown RBP5.44□□□□□ -1.54
RFC4-213ENST00000489028 B4GALT6Q9UBX8 382 aa5.44□□□□□ -1.54
RFC4-213ENST00000489028 ZDHHC9Q9Y397 364 aa5.44□□□□□ -1.54
RFC4-213ENST00000489028 B8ZZF3 427 aa5.43□□□□□ -1.54
RFC4-213ENST00000489028 GOLGA6L22H0YM25 854 aa5.43□□□□□ -1.54
RFC4-213ENST00000489028 ENPP3O14638 875 aa5.43□□□□□ -1.54
RFC4-213ENST00000489028 HIP1RO75146 1068 aa5.43□□□□□ -1.54
RFC4-213ENST00000489028 ZNF888P0CJ79 500 aaPredicted RBP5.43□□□□□ -1.54
RFC4-213ENST00000489028 ADCY8P40145 1251 aa5.43□□□□□ -1.54
RFC4-213ENST00000489028 ECE1P42892 770 aa5.43□□□□□ -1.54
RFC4-213ENST00000489028 KIF11P52732 1056 aa5.43□□□□□ -1.54
RFC4-213ENST00000489028 TOP3AQ13472 1001 aaPredicted RBP5.43□□□□□ -1.54
RFC4-213ENST00000489028 ARHGAP44Q17R89 818 aa5.43□□□□□ -1.54
RFC4-213ENST00000489028 KANK2Q63ZY3 851 aa5.43□□□□□ -1.54
RFC4-213ENST00000489028 CC2D1AQ6P1N0 951 aaPredicted RBP5.43□□□□□ -1.54
RFC4-213ENST00000489028 BORAQ6PGQ7 559 aa5.43□□□□□ -1.54
RFC4-213ENST00000489028 FAM124AQ86V42 546 aa5.43□□□□□ -1.54
RFC4-213ENST00000489028 LRRTM3Q86VH5 581 aa5.43□□□□□ -1.54
RFC4-213ENST00000489028 NIM1KQ8IY84 436 aa5.43□□□□□ -1.54
RFC4-213ENST00000489028 HIPK4Q8NE63 616 aa5.43□□□□□ -1.54
RFC4-213ENST00000489028 ERCC4Q92889 916 aaPredicted RBP5.43□□□□□ -1.54
RFC4-213ENST00000489028 WNK4Q96J92 1243 aa5.43□□□□□ -1.54
RFC4-213ENST00000489028 FEZ1Q99689 392 aa5.43□□□□□ -1.54
RFC4-213ENST00000489028 PTPN18Q99952 460 aa5.43□□□□□ -1.54
RFC4-213ENST00000489028 SSBP3Q9BWW4 388 aaPredicted RBP5.43□□□□□ -1.54
RFC4-213ENST00000489028 BTBD2Q9BX70 525 aa5.43□□□□□ -1.54
RFC4-213ENST00000489028 KATNBL1Q9H079 304 aa5.43□□□□□ -1.54
RFC4-213ENST00000489028 BARX1Q9HBU1 254 aaPredicted RBP5.43□□□□□ -1.54
RFC4-213ENST00000489028 H2AFY2Q9P0M6 372 aaPredicted RBP5.43□□□□□ -1.54
RFC4-213ENST00000489028 ASB1Q9Y576 335 aa5.43□□□□□ -1.54
RFC4-213ENST00000489028 NCANO14594 1321 aa5.43□□□□□ -1.54
RFC4-213ENST00000489028 ZNF891A8MT65 544 aaPredicted RBP5.42□□□□□ -1.54
RFC4-213ENST00000489028 PRRG2O14669 202 aa5.42□□□□□ -1.54
RFC4-213ENST00000489028 PLATP00750 562 aa5.42□□□□□ -1.54
RFC4-213ENST00000489028 POU3F2P20265 443 aaPredicted RBP5.42□□□□□ -1.54
RFC4-213ENST00000489028 PTX3P26022 381 aaPredicted RBP5.42□□□□□ -1.54
RFC4-213ENST00000489028 BUD31P41223 144 aaPredicted RBP5.42□□□□□ -1.54
RFC4-213ENST00000489028 CD83Q01151 205 aa5.42□□□□□ -1.54
RFC4-213ENST00000489028 PCBP1Q15365 356 aaKnown RBP eCLIP5.42□□□□□ -1.54
RFC4-213ENST00000489028 SEPT7Q16181 437 aaKnown RBP5.42□□□□□ -1.54
RFC4-213ENST00000489028 WDR72Q3MJ13 1102 aa5.42□□□□□ -1.54
RFC4-213ENST00000489028 CNNM4Q6P4Q7 775 aa5.42□□□□□ -1.54
RFC4-213ENST00000489028 UBE2R2Q712K3 238 aaPredicted RBP5.42□□□□□ -1.54
RFC4-213ENST00000489028 KIAA1958Q8N8K9 716 aa5.42□□□□□ -1.54
RFC4-213ENST00000489028 ORAI3Q9BRQ5 295 aa5.42□□□□□ -1.54
RFC4-213ENST00000489028 TARS2Q9BW92 718 aaKnown RBP5.42□□□□□ -1.54
RFC4-213ENST00000489028 KRTAP4-7Q9BYR0 210 aa5.42□□□□□ -1.54
RFC4-213ENST00000489028 CABP5Q9NP86 173 aa5.42□□□□□ -1.54
RFC4-213ENST00000489028 B4GALT4O60513 344 aa5.41□□□□□ -1.54
RFC4-213ENST00000489028 CNOT4O95628 575 aaKnown RBP5.41□□□□□ -1.54
RFC4-213ENST00000489028 ITGB3P05106 788 aa5.41□□□□□ -1.54
RFC4-213ENST00000489028 CELA3BP08861 270 aa5.41□□□□□ -1.54
RFC4-213ENST00000489028 ATP2A2P16615 1042 aaKnown RBP5.41□□□□□ -1.54
RFC4-213ENST00000489028 POLD1P28340 1107 aa5.41□□□□□ -1.54
RFC4-213ENST00000489028 FLT3P36888 993 aa5.41□□□□□ -1.54
RFC4-213ENST00000489028 KRTAP10-2P60368 255 aa5.41□□□□□ -1.54
RFC4-213ENST00000489028 DSG1Q02413 1049 aa5.41□□□□□ -1.54
RFC4-213ENST00000489028 ESRP1Q6NXG1 681 aaKnown RBP5.41□□□□□ -1.54
RFC4-213ENST00000489028 DPP8Q6V1X1 898 aaPredicted RBP5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms