RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 TSGA10IPQ3SY00 556 aa21.01■□□□□ 0.95
HDAC6-231ENST00000488905 RASEFQ8IZ41 740 aa21.01■□□□□ 0.95
HDAC6-231ENST00000488905 GJD3Q8N144 294 aa21.01■□□□□ 0.95
HDAC6-231ENST00000488905 FTHL17Q9BXU8 183 aa21.01■□□□□ 0.95
HDAC6-231ENST00000488905 LMAN2LQ9H0V9 348 aa21.01■□□□□ 0.95
HDAC6-231ENST00000488905 GLT8D2Q9H1C3 349 aa21.01■□□□□ 0.95
HDAC6-231ENST00000488905 C11orf16Q9NQ32 467 aa21.01■□□□□ 0.95
HDAC6-231ENST00000488905 PCDHA2Q9Y5H9 948 aa21.01■□□□□ 0.95
HDAC6-231ENST00000488905 V9GY48 417 aaPredicted RBP21.01■□□□□ 0.95
HDAC6-231ENST00000488905 IGSF9BQ9UPX0 1349 aa21.01■□□□□ 0.95
HDAC6-231ENST00000488905 SMCO2A6NFE2 343 aa21■□□□□ 0.95
HDAC6-231ENST00000488905 MEIS1O00470 390 aa21■□□□□ 0.95
HDAC6-231ENST00000488905 GRM6O15303 877 aa21■□□□□ 0.95
HDAC6-231ENST00000488905 DGKIO75912 1065 aa21■□□□□ 0.95
HDAC6-231ENST00000488905 RCAN1P53805 252 aa21■□□□□ 0.95
HDAC6-231ENST00000488905 KRT32Q14532 448 aa21■□□□□ 0.95
HDAC6-231ENST00000488905 TMEM260Q9NX78 707 aa21■□□□□ 0.95
HDAC6-231ENST00000488905 CLDND1Q9NY35 253 aa21■□□□□ 0.95
HDAC6-231ENST00000488905 POTEB3A0JP26 581 aa20.99■□□□□ 0.95
HDAC6-231ENST00000488905 FAM86C2PA6NEL3 165 aa20.99■□□□□ 0.95
HDAC6-231ENST00000488905 PI4K2BG5E9Z4 385 aa20.99■□□□□ 0.95
HDAC6-231ENST00000488905 GPR37L1O60883 481 aa20.99■□□□□ 0.95
HDAC6-231ENST00000488905 ATG7O95352 703 aa20.99■□□□□ 0.95
HDAC6-231ENST00000488905 CDC27P30260 824 aa20.99■□□□□ 0.95
HDAC6-231ENST00000488905 SSTR3P32745 418 aaPredicted RBP20.99■□□□□ 0.95
HDAC6-231ENST00000488905 SLC26A2P50443 739 aa20.99■□□□□ 0.95
HDAC6-231ENST00000488905 PAK2Q13177 524 aa20.99■□□□□ 0.95
HDAC6-231ENST00000488905 POTEBQ6S5H4 581 aa20.99■□□□□ 0.95
HDAC6-231ENST00000488905 EP400NLQ6ZTU2 488 aa20.99■□□□□ 0.95
HDAC6-231ENST00000488905 CENPQQ7L2Z9 268 aaPredicted RBP20.99■□□□□ 0.95
HDAC6-231ENST00000488905 FAM217BQ9NTX9 383 aaPredicted RBP20.99■□□□□ 0.95
HDAC6-231ENST00000488905 PADI3Q9ULW8 664 aa20.99■□□□□ 0.95
HDAC6-231ENST00000488905 HCN4Q9Y3Q4 1203 aa20.99■□□□□ 0.95
HDAC6-231ENST00000488905 KDM3AQ9Y4C1 1321 aa20.99■□□□□ 0.95
HDAC6-231ENST00000488905 IGKV6D-21A0A0A0MT36 114 aa20.98■□□□□ 0.95
HDAC6-231ENST00000488905 SMIM35A0A1B0GVV1 85 aa20.98■□□□□ 0.95
HDAC6-231ENST00000488905 CCNE2O96020 404 aa20.98■□□□□ 0.95
HDAC6-231ENST00000488905 MMP1P03956 469 aa20.98■□□□□ 0.95
HDAC6-231ENST00000488905 ZNF76P36508 570 aa20.98■□□□□ 0.95
HDAC6-231ENST00000488905 NIPA1Q7RTP0 329 aa20.98■□□□□ 0.95
HDAC6-231ENST00000488905 NPAS4Q8IUM7 802 aa20.98■□□□□ 0.95
HDAC6-231ENST00000488905 CMTR2Q8IYT2 770 aaKnown RBP20.98■□□□□ 0.95
HDAC6-231ENST00000488905 CRIPAKQ8N1N5 446 aa20.98■□□□□ 0.95
HDAC6-231ENST00000488905 FAM122AQ96E09 287 aa20.98■□□□□ 0.95
HDAC6-231ENST00000488905 PLVAPQ9BX97 442 aa20.98■□□□□ 0.95
HDAC6-231ENST00000488905 CELF4Q9BZC1 486 aaKnown RBP20.98■□□□□ 0.95
HDAC6-231ENST00000488905 MRPL42Q9Y6G3 142 aaKnown RBP20.98■□□□□ 0.95
HDAC6-231ENST00000488905 DDX39AO00148 427 aaKnown RBP20.97■□□□□ 0.95
HDAC6-231ENST00000488905 NCK2O43639 380 aa20.97■□□□□ 0.95
HDAC6-231ENST00000488905 CDC45O75419 566 aa20.97■□□□□ 0.95
HDAC6-231ENST00000488905 HMGB1P09429 215 aaKnown RBP20.97■□□□□ 0.95
HDAC6-231ENST00000488905 MTHFD1LQ6UB35 978 aa20.97■□□□□ 0.95
HDAC6-231ENST00000488905 RTN4RL1Q86UN2 441 aaPredicted RBP20.97■□□□□ 0.95
HDAC6-231ENST00000488905 CCDC60Q8IWA6 550 aaPredicted RBP20.97■□□□□ 0.95
HDAC6-231ENST00000488905 NAP1L2Q9ULW6 460 aaPredicted RBP20.97■□□□□ 0.95
HDAC6-231ENST00000488905 FAM50BQ9Y247 325 aa20.97■□□□□ 0.95
HDAC6-231ENST00000488905 COL1A2P08123 1366 aa20.97■□□□□ 0.95
HDAC6-231ENST00000488905 WDFY4Q6ZS81 3184 aa20.96■□□□□ 0.95
HDAC6-231ENST00000488905 FAM86B1E9PN63 330 aa20.96■□□□□ 0.95
HDAC6-231ENST00000488905 BACH1O14867 736 aa20.96■□□□□ 0.95
HDAC6-231ENST00000488905 CSPG5O95196 566 aa20.96■□□□□ 0.95
HDAC6-231ENST00000488905 FAM86B2P0C5J1 330 aa20.96■□□□□ 0.95
HDAC6-231ENST00000488905 SCG2P13521 617 aa20.96■□□□□ 0.95
HDAC6-231ENST00000488905 METAP2P50579 478 aaKnown RBP eCLIP20.96■□□□□ 0.95
HDAC6-231ENST00000488905 KRT76Q01546 638 aa20.96■□□□□ 0.95
HDAC6-231ENST00000488905 HYAL1Q12794 435 aa20.96■□□□□ 0.95
HDAC6-231ENST00000488905 PFKFB3Q16875 520 aaPredicted RBP20.96■□□□□ 0.95
HDAC6-231ENST00000488905 FAM160B1Q5W0V3 765 aa20.96■□□□□ 0.95
HDAC6-231ENST00000488905 ABHD15Q6UXT9 468 aa20.96■□□□□ 0.95
HDAC6-231ENST00000488905 PLA2G4DQ86XP0 818 aa20.96■□□□□ 0.95
HDAC6-231ENST00000488905 NME8Q8N427 588 aa20.96■□□□□ 0.95
HDAC6-231ENST00000488905 ATP8B4Q8TF62 1192 aa20.96■□□□□ 0.95
HDAC6-231ENST00000488905 P2RX5Q93086 422 aa20.96■□□□□ 0.95
HDAC6-231ENST00000488905 MUC6Q6W4X9 2439 aa20.96■□□□□ 0.95
HDAC6-231ENST00000488905 NID2Q14112 1375 aa20.96■□□□□ 0.95
HDAC6-231ENST00000488905 IGLV3-22A0A075B6J6 115 aa20.95■□□□□ 0.94
HDAC6-231ENST00000488905 ESYT2A0FGR8 921 aa20.95■□□□□ 0.94
HDAC6-231ENST00000488905 HBP1O60381 514 aa20.95■□□□□ 0.94
HDAC6-231ENST00000488905 STAG3L1P0CL83 205 aa20.95■□□□□ 0.94
HDAC6-231ENST00000488905 LTBRP36941 435 aa20.95■□□□□ 0.94
HDAC6-231ENST00000488905 FGD1P98174 961 aa20.95■□□□□ 0.94
HDAC6-231ENST00000488905 CTC1Q2NKJ3 1217 aa20.95■□□□□ 0.94
HDAC6-231ENST00000488905 PAN2Q504Q3 1202 aaKnown RBP20.95■□□□□ 0.94
HDAC6-231ENST00000488905 JAKMIP3Q5VZ66 844 aa20.95■□□□□ 0.94
HDAC6-231ENST00000488905 CRYGNQ8WXF5 182 aa20.95■□□□□ 0.94
HDAC6-231ENST00000488905 TMX1Q9H3N1 280 aa20.95■□□□□ 0.94
HDAC6-231ENST00000488905 ALG13Q9NP73 1137 aaKnown RBP20.95■□□□□ 0.94
HDAC6-231ENST00000488905 IPO5O00410 1097 aaKnown RBP20.94■□□□□ 0.94
HDAC6-231ENST00000488905 DHX15O43143 795 aaKnown RBP20.94■□□□□ 0.94
HDAC6-231ENST00000488905 KLRC1P26715 233 aa20.94■□□□□ 0.94
HDAC6-231ENST00000488905 ADD1P35611 737 aaKnown RBP20.94■□□□□ 0.94
HDAC6-231ENST00000488905 SETQ01105 290 aaPredicted RBP20.94■□□□□ 0.94
HDAC6-231ENST00000488905 ZP2Q05996 745 aa20.94■□□□□ 0.94
HDAC6-231ENST00000488905 TMEM266Q2M3C6 531 aa20.94■□□□□ 0.94
HDAC6-231ENST00000488905 ZNF302Q9NR11 478 aa20.94■□□□□ 0.94
HDAC6-231ENST00000488905 PRKAG3Q9UGI9 489 aa20.94■□□□□ 0.94
HDAC6-231ENST00000488905 PLAGL2Q9UPG8 496 aa20.94■□□□□ 0.94
HDAC6-231ENST00000488905 ARIH1Q9Y4X5 557 aaPredicted RBP20.94■□□□□ 0.94
HDAC6-231ENST00000488905 CCDC196A0A1B0GTZ2 297 aa20.93■□□□□ 0.94
HDAC6-231ENST00000488905 CYP3A4P08684 503 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms