RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 KCNH3Q9ULD8 1083 aa13.78□□□□□ -0.2
TRAIP-209ENST00000488860 TRPC6Q9Y210 931 aa13.78□□□□□ -0.2
TRAIP-209ENST00000488860 TMEM150BA6NC51 233 aa13.77□□□□□ -0.21
TRAIP-209ENST00000488860 POLR2DO15514 142 aaKnown RBP13.77□□□□□ -0.21
TRAIP-209ENST00000488860 SLC26A4O43511 780 aa13.77□□□□□ -0.21
TRAIP-209ENST00000488860 ZNF862O60290 1169 aa13.77□□□□□ -0.21
TRAIP-209ENST00000488860 KPNA6O60684 536 aa13.77□□□□□ -0.21
TRAIP-209ENST00000488860 TFRCP02786 760 aaKnown RBP13.77□□□□□ -0.21
TRAIP-209ENST00000488860 SSBP05455 408 aaKnown RBP eCLIP13.77□□□□□ -0.21
TRAIP-209ENST00000488860 ASGR1P07306 291 aa13.77□□□□□ -0.21
TRAIP-209ENST00000488860 HOXD8P13378 290 aaPredicted RBP13.77□□□□□ -0.21
TRAIP-209ENST00000488860 LIG1P18858 919 aa13.77□□□□□ -0.21
TRAIP-209ENST00000488860 SYKP43405 635 aa13.77□□□□□ -0.21
TRAIP-209ENST00000488860 PSEN2P49810 448 aa13.77□□□□□ -0.21
TRAIP-209ENST00000488860 BRCA2P51587 3418 aa13.77□□□□□ -0.21
TRAIP-209ENST00000488860 PURAQ00577 322 aaKnown RBP13.77□□□□□ -0.21
TRAIP-209ENST00000488860 MFSD10Q14728 455 aa13.77□□□□□ -0.21
TRAIP-209ENST00000488860 HYIQ5T013 277 aa13.77□□□□□ -0.21
TRAIP-209ENST00000488860 PLA2G4FQ68DD2 849 aa13.77□□□□□ -0.21
TRAIP-209ENST00000488860 CXCL17Q6UXB2 119 aa13.77□□□□□ -0.21
TRAIP-209ENST00000488860 ARRDC4Q8NCT1 418 aa13.77□□□□□ -0.21
TRAIP-209ENST00000488860 PIGOQ8TEQ8 1089 aa13.77□□□□□ -0.21
TRAIP-209ENST00000488860 U2AF1L4Q8WU68 220 aaKnown RBP13.77□□□□□ -0.21
TRAIP-209ENST00000488860 PPP1R13LQ8WUF5 828 aa13.77□□□□□ -0.21
TRAIP-209ENST00000488860 C16orf70Q9BSU1 422 aa13.77□□□□□ -0.21
TRAIP-209ENST00000488860 MTG1Q9BT17 334 aaPredicted RBP13.77□□□□□ -0.21
TRAIP-209ENST00000488860 TMEM106CQ9BVX2 250 aa13.77□□□□□ -0.21
TRAIP-209ENST00000488860 KATNAL1Q9BW62 490 aa13.77□□□□□ -0.21
TRAIP-209ENST00000488860 MAFBQ9Y5Q3 323 aaPredicted RBP13.77□□□□□ -0.21
TRAIP-209ENST00000488860 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.76□□□□□ -0.21
TRAIP-209ENST00000488860 E9PMD0 336 aa13.76□□□□□ -0.21
TRAIP-209ENST00000488860 H3BRB1 525 aa13.76□□□□□ -0.21
TRAIP-209ENST00000488860 F2P00734 622 aa13.76□□□□□ -0.21
TRAIP-209ENST00000488860 GJB1P08034 283 aa13.76□□□□□ -0.21
TRAIP-209ENST00000488860 ATP4AP20648 1035 aa13.76□□□□□ -0.21
TRAIP-209ENST00000488860 MUTP22033 750 aa13.76□□□□□ -0.21
TRAIP-209ENST00000488860 YWHABP31946 246 aaKnown RBP13.76□□□□□ -0.21
TRAIP-209ENST00000488860 ACLYP53396 1101 aa13.76□□□□□ -0.21
TRAIP-209ENST00000488860 PSMC6P62333 389 aa13.76□□□□□ -0.21
TRAIP-209ENST00000488860 NKX3-2P78367 333 aa13.76□□□□□ -0.21
TRAIP-209ENST00000488860 DHX8Q14562 1220 aaKnown RBP13.76□□□□□ -0.21
TRAIP-209ENST00000488860 PLCB4Q15147 1175 aa13.76□□□□□ -0.21
TRAIP-209ENST00000488860 KIAA0753Q2KHM9 967 aa13.76□□□□□ -0.21
TRAIP-209ENST00000488860 MTERF2Q49AM1 385 aa13.76□□□□□ -0.21
TRAIP-209ENST00000488860 PLPPR4Q7Z2D5 763 aa13.76□□□□□ -0.21
TRAIP-209ENST00000488860 KCNK18Q7Z418 384 aa13.76□□□□□ -0.21
TRAIP-209ENST00000488860 C4orf19Q8IY42 314 aa13.76□□□□□ -0.21
TRAIP-209ENST00000488860 CEP57L1Q8IYX8 460 aa13.76□□□□□ -0.21
TRAIP-209ENST00000488860 VTI1AQ96AJ9 217 aa13.76□□□□□ -0.21
TRAIP-209ENST00000488860 FAM167AQ96KS9 214 aa13.76□□□□□ -0.21
TRAIP-209ENST00000488860 SH2D3AQ9BRG2 576 aa13.76□□□□□ -0.21
TRAIP-209ENST00000488860 TUT1Q9H6E5 874 aaKnown RBP13.76□□□□□ -0.21
TRAIP-209ENST00000488860 OGDHLQ9ULD0 1010 aa13.76□□□□□ -0.21
TRAIP-209ENST00000488860 HPSEQ9Y251 543 aa13.76□□□□□ -0.21
TRAIP-209ENST00000488860 ARHGEF35A5YM69 484 aa13.75□□□□□ -0.21
TRAIP-209ENST00000488860 MOXD2PA6NHM9 499 aa13.75□□□□□ -0.21
TRAIP-209ENST00000488860 DNM1LO00429 736 aa13.75□□□□□ -0.21
TRAIP-209ENST00000488860 ZBTB39O15060 712 aa13.75□□□□□ -0.21
TRAIP-209ENST00000488860 NR1I2O75469 434 aa13.75□□□□□ -0.21
TRAIP-209ENST00000488860 SGPL1O95470 568 aa13.75□□□□□ -0.21
TRAIP-209ENST00000488860 SLC26A2P50443 739 aa13.75□□□□□ -0.21
TRAIP-209ENST00000488860 IGBP1P78318 339 aa13.75□□□□□ -0.21
TRAIP-209ENST00000488860 FAM160A1Q05DH4 1040 aa13.75□□□□□ -0.21
TRAIP-209ENST00000488860 MCM6Q14566 821 aa13.75□□□□□ -0.21
TRAIP-209ENST00000488860 XKR3Q5GH77 459 aa13.75□□□□□ -0.21
TRAIP-209ENST00000488860 CCSAPQ6IQ19 270 aaPredicted RBP13.75□□□□□ -0.21
TRAIP-209ENST00000488860 IQUBQ8NA54 791 aa13.75□□□□□ -0.21
TRAIP-209ENST00000488860 ATP8B4Q8TF62 1192 aa13.75□□□□□ -0.21
TRAIP-209ENST00000488860 LRRC15Q8TF66 581 aa13.75□□□□□ -0.21
TRAIP-209ENST00000488860 RAD54LQ92698 747 aa13.75□□□□□ -0.21
TRAIP-209ENST00000488860 KAT2BQ92831 832 aa13.75□□□□□ -0.21
TRAIP-209ENST00000488860 NACC1Q96RE7 527 aa13.75□□□□□ -0.21
TRAIP-209ENST00000488860 PYM1Q9BRP8 204 aaKnown RBP13.75□□□□□ -0.21
TRAIP-209ENST00000488860 RNPEPQ9H4A4 650 aa13.75□□□□□ -0.21
TRAIP-209ENST00000488860 BMP2KQ9NSY1 1161 aaPredicted RBP13.75□□□□□ -0.21
TRAIP-209ENST00000488860 STK17AQ9UEE5 414 aa13.75□□□□□ -0.21
TRAIP-209ENST00000488860 SERTAD1Q9UHV2 236 aa13.75□□□□□ -0.21
TRAIP-209ENST00000488860 DNM3Q9UQ16 869 aa13.75□□□□□ -0.21
TRAIP-209ENST00000488860 FAM237AA0A1B0GTK4 181 aa13.74□□□□□ -0.21
TRAIP-209ENST00000488860 A0A1W2PQ45 241 aaPredicted RBP13.74□□□□□ -0.21
TRAIP-209ENST00000488860 A0A1W2PQY0 241 aa13.74□□□□□ -0.21
TRAIP-209ENST00000488860 ZNF202O95125 648 aa13.74□□□□□ -0.21
TRAIP-209ENST00000488860 LYPLA2O95372 231 aa13.74□□□□□ -0.21
TRAIP-209ENST00000488860 EYA4O95677 639 aa13.74□□□□□ -0.21
TRAIP-209ENST00000488860 PLA2G4BP0C869 781 aa13.74□□□□□ -0.21
TRAIP-209ENST00000488860 PTMSP20962 102 aa13.74□□□□□ -0.21
TRAIP-209ENST00000488860 GJA8P48165 433 aa13.74□□□□□ -0.21
TRAIP-209ENST00000488860 PPFIA1Q13136 1202 aa13.74□□□□□ -0.21
TRAIP-209ENST00000488860 NFKBIBQ15653 356 aa13.74□□□□□ -0.21
TRAIP-209ENST00000488860 XKR9Q5GH70 373 aa13.74□□□□□ -0.21
TRAIP-209ENST00000488860 FAM47CQ5HY64 1035 aa13.74□□□□□ -0.21
TRAIP-209ENST00000488860 COL13A1Q5TAT6 717 aaPredicted RBP13.74□□□□□ -0.21
TRAIP-209ENST00000488860 ANO5Q75V66 913 aa13.74□□□□□ -0.21
TRAIP-209ENST00000488860 OTUD6AQ7L8S5 288 aa13.74□□□□□ -0.21
TRAIP-209ENST00000488860 FMR1NBQ8N0W7 255 aaPredicted RBP13.74□□□□□ -0.21
TRAIP-209ENST00000488860 CNNM3Q8NE01 707 aa13.74□□□□□ -0.21
TRAIP-209ENST00000488860 GPT2Q8TD30 523 aa13.74□□□□□ -0.21
TRAIP-209ENST00000488860 BBXQ8WY36 941 aaPredicted RBP13.74□□□□□ -0.21
TRAIP-209ENST00000488860 LARP4BQ92615 738 aaKnown RBP13.74□□□□□ -0.21
TRAIP-209ENST00000488860 CEP170P1Q96L14 293 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms