RNA–Protein interactions for RNA: ENST00000488833.1

ATG9A-222, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 487 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-222ENST00000488833 ADGRA3Q8IWK6 1321 aa20.81■□□□□ 0.92
ATG9A-222ENST00000488833 ADAMTS3O15072 1205 aa20.81■□□□□ 0.92
ATG9A-222ENST00000488833 PRPF3O43395 683 aaKnown RBP20.81■□□□□ 0.92
ATG9A-222ENST00000488833 ATG7O95352 703 aa20.81■□□□□ 0.92
ATG9A-222ENST00000488833 CYP3A4P08684 503 aa20.81■□□□□ 0.92
ATG9A-222ENST00000488833 PSMA5P28066 241 aa20.81■□□□□ 0.92
ATG9A-222ENST00000488833 CTNNB1P35222 781 aa20.81■□□□□ 0.92
ATG9A-222ENST00000488833 SLC26A2P50443 739 aa20.81■□□□□ 0.92
ATG9A-222ENST00000488833 AKAP17AQ02040 695 aaKnown RBP20.81■□□□□ 0.92
ATG9A-222ENST00000488833 PKN1Q16512 942 aa20.81■□□□□ 0.92
ATG9A-222ENST00000488833 UIMC1Q96RL1 719 aa20.81■□□□□ 0.92
ATG9A-222ENST00000488833 AGO3Q9H9G7 860 aaKnown RBP20.81■□□□□ 0.92
ATG9A-222ENST00000488833 MYO7AQ13402 2215 aa20.81■□□□□ 0.92
ATG9A-222ENST00000488833 IGLV3-22A0A075B6J6 115 aa20.8■□□□□ 0.92
ATG9A-222ENST00000488833 IGKV6D-21A0A0A0MT36 114 aa20.8■□□□□ 0.92
ATG9A-222ENST00000488833 H3BNC9 293 aa20.8■□□□□ 0.92
ATG9A-222ENST00000488833 IPO5O00410 1097 aaKnown RBP20.8■□□□□ 0.92
ATG9A-222ENST00000488833 ENPP3O14638 875 aa20.8■□□□□ 0.92
ATG9A-222ENST00000488833 PPFIA3O75145 1194 aa20.8■□□□□ 0.92
ATG9A-222ENST00000488833 TIGD5Q53EQ6 642 aa20.8■□□□□ 0.92
ATG9A-222ENST00000488833 MCTP2Q6DN12 878 aa20.8■□□□□ 0.92
ATG9A-222ENST00000488833 ABHD15Q6UXT9 468 aa20.8■□□□□ 0.92
ATG9A-222ENST00000488833 CCDC60Q8IWA6 550 aaPredicted RBP20.8■□□□□ 0.92
ATG9A-222ENST00000488833 CRYGNQ8WXF5 182 aa20.8■□□□□ 0.92
ATG9A-222ENST00000488833 AGXT2Q9BYV1 514 aa20.8■□□□□ 0.92
ATG9A-222ENST00000488833 ZNF302Q9NR11 478 aa20.8■□□□□ 0.92
ATG9A-222ENST00000488833 SMIM35A0A1B0GVV1 85 aa20.79■□□□□ 0.92
ATG9A-222ENST00000488833 HBP1O60381 514 aa20.79■□□□□ 0.92
ATG9A-222ENST00000488833 GNA11P29992 359 aa20.79■□□□□ 0.92
ATG9A-222ENST00000488833 SETQ01105 290 aaPredicted RBP20.79■□□□□ 0.92
ATG9A-222ENST00000488833 MIS18BP1Q6P0N0 1132 aa20.79■□□□□ 0.92
ATG9A-222ENST00000488833 PDXDC2PQ6P474 469 aa20.79■□□□□ 0.92
ATG9A-222ENST00000488833 MTHFD1LQ6UB35 978 aa20.79■□□□□ 0.92
ATG9A-222ENST00000488833 FBXL16Q8N461 479 aa20.79■□□□□ 0.92
ATG9A-222ENST00000488833 RASGRP4Q8TDF6 673 aa20.79■□□□□ 0.92
ATG9A-222ENST00000488833 ATP8B4Q8TF62 1192 aa20.79■□□□□ 0.92
ATG9A-222ENST00000488833 LINC01599Q8WXQ3 324 aa20.79■□□□□ 0.92
ATG9A-222ENST00000488833 ZNF577Q9BSK1 485 aa20.79■□□□□ 0.92
ATG9A-222ENST00000488833 SLC26A6Q9BXS9 759 aa20.79■□□□□ 0.92
ATG9A-222ENST00000488833 RC3H2Q9HBD1 1191 aaKnown RBP20.79■□□□□ 0.92
ATG9A-222ENST00000488833 SQORQ9Y6N5 450 aa20.79■□□□□ 0.92
ATG9A-222ENST00000488833 IGSF9BQ9UPX0 1349 aa20.78■□□□□ 0.92
ATG9A-222ENST00000488833 MYH9P35579 1960 aaKnown RBP20.78■□□□□ 0.92
ATG9A-222ENST00000488833 DHX15O43143 795 aaKnown RBP20.78■□□□□ 0.92
ATG9A-222ENST00000488833 CCT2P78371 535 aaKnown RBP20.78■□□□□ 0.92
ATG9A-222ENST00000488833 PAK2Q13177 524 aa20.78■□□□□ 0.92
ATG9A-222ENST00000488833 CCDC148Q8NFR7 591 aa20.78■□□□□ 0.92
ATG9A-222ENST00000488833 BICD2Q8TD16 824 aa20.78■□□□□ 0.92
ATG9A-222ENST00000488833 RNF26Q9BY78 433 aaPredicted RBP20.78■□□□□ 0.92
ATG9A-222ENST00000488833 CELF4Q9BZC1 486 aaKnown RBP20.78■□□□□ 0.92
ATG9A-222ENST00000488833 TCEAL9Q9UHQ7 104 aa20.78■□□□□ 0.92
ATG9A-222ENST00000488833 COL1A2P08123 1366 aa20.77■□□□□ 0.92
ATG9A-222ENST00000488833 IFNAR1P17181 557 aa20.77■□□□□ 0.92
ATG9A-222ENST00000488833 KCNA5P22460 613 aa20.77■□□□□ 0.92
ATG9A-222ENST00000488833 KLRC1P26715 233 aa20.77■□□□□ 0.92
ATG9A-222ENST00000488833 KRT76Q01546 638 aa20.77■□□□□ 0.92
ATG9A-222ENST00000488833 BTG3Q14201 252 aaPredicted RBP20.77■□□□□ 0.92
ATG9A-222ENST00000488833 NTRK3Q16288 839 aa20.77■□□□□ 0.92
ATG9A-222ENST00000488833 PRR16Q569H4 304 aa20.77■□□□□ 0.92
ATG9A-222ENST00000488833 SWSAP1Q6NVH7 229 aa20.77■□□□□ 0.92
ATG9A-222ENST00000488833 CKAP2LQ8IYA6 745 aa20.77■□□□□ 0.92
ATG9A-222ENST00000488833 BANK1Q8NDB2 785 aa20.77■□□□□ 0.92
ATG9A-222ENST00000488833 FTHL17Q9BXU8 183 aa20.77■□□□□ 0.92
ATG9A-222ENST00000488833 NCOA5Q9HCD5 579 aaKnown RBP20.77■□□□□ 0.92
ATG9A-222ENST00000488833 TBC1D22BQ9NU19 505 aa20.77■□□□□ 0.92
ATG9A-222ENST00000488833 VPS54Q9P1Q0 977 aa20.77■□□□□ 0.92
ATG9A-222ENST00000488833 PADI3Q9ULW8 664 aa20.77■□□□□ 0.92
ATG9A-222ENST00000488833 RWDD3Q9Y3V2 267 aa20.77■□□□□ 0.92
ATG9A-222ENST00000488833 KDM3AQ9Y4C1 1321 aa20.77■□□□□ 0.91
ATG9A-222ENST00000488833 EVPLQ92817 2033 aa20.77■□□□□ 0.91
ATG9A-222ENST00000488833 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.76■□□□□ 0.91
ATG9A-222ENST00000488833 PDIA3P30101 505 aaKnown RBP20.76■□□□□ 0.91
ATG9A-222ENST00000488833 BMPR1AP36894 532 aa20.76■□□□□ 0.91
ATG9A-222ENST00000488833 TCEAL5Q5H9L2 206 aa20.76■□□□□ 0.91
ATG9A-222ENST00000488833 ZNF484Q5JVG2 852 aa20.76■□□□□ 0.91
ATG9A-222ENST00000488833 ZNF746Q6NUN9 644 aaPredicted RBP20.76■□□□□ 0.91
ATG9A-222ENST00000488833 NME8Q8N427 588 aa20.76■□□□□ 0.91
ATG9A-222ENST00000488833 C11orf84Q9BUA3 381 aaPredicted RBP20.76■□□□□ 0.91
ATG9A-222ENST00000488833 GINS2Q9Y248 185 aa20.76■□□□□ 0.91
ATG9A-222ENST00000488833 ATG2AQ2TAZ0 1938 aa20.76■□□□□ 0.91
ATG9A-222ENST00000488833 C5orf67F2Z3F1 127 aa20.75■□□□□ 0.91
ATG9A-222ENST00000488833 RB1P06400 928 aa20.75■□□□□ 0.91
ATG9A-222ENST00000488833 LINC00271P0C7V0 271 aa20.75■□□□□ 0.91
ATG9A-222ENST00000488833 RTN4RL1Q86UN2 441 aaPredicted RBP20.75■□□□□ 0.91
ATG9A-222ENST00000488833 NPAS4Q8IUM7 802 aa20.75■□□□□ 0.91
ATG9A-222ENST00000488833 ZNF689Q96CS4 500 aaPredicted RBP20.75■□□□□ 0.91
ATG9A-222ENST00000488833 NSUN3Q9H649 340 aaKnown RBP20.75■□□□□ 0.91
ATG9A-222ENST00000488833 KIAA1671Q9BY89 1806 aa20.74■□□□□ 0.91
ATG9A-222ENST00000488833 ZBTB42B2RXF5 422 aa20.74■□□□□ 0.91
ATG9A-222ENST00000488833 DGKIO75912 1065 aa20.74■□□□□ 0.91
ATG9A-222ENST00000488833 ATP4AP20648 1035 aa20.74■□□□□ 0.91
ATG9A-222ENST00000488833 IBSPP21815 317 aaPredicted RBP20.74■□□□□ 0.91
ATG9A-222ENST00000488833 CIITAP33076 1130 aa20.74■□□□□ 0.91
ATG9A-222ENST00000488833 EVCP57679 992 aa20.74■□□□□ 0.91
ATG9A-222ENST00000488833 TMEM266Q2M3C6 531 aa20.74■□□□□ 0.91
ATG9A-222ENST00000488833 LEXMQ3ZCV2 418 aa20.74■□□□□ 0.91
ATG9A-222ENST00000488833 RUFY3Q7L099 469 aa20.74■□□□□ 0.91
ATG9A-222ENST00000488833 SMAP1Q8IYB5 467 aaPredicted RBP20.74■□□□□ 0.91
ATG9A-222ENST00000488833 CLP1Q92989 425 aaKnown RBP20.74■□□□□ 0.91
ATG9A-222ENST00000488833 WDR81Q562E7 1941 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms