RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 FGBP02675 491 aa16.95■□□□□ 0.3
CXCL12-207ENST00000488591 ACRP10323 421 aa16.95■□□□□ 0.3
CXCL12-207ENST00000488591 PDCP20941 246 aa16.95■□□□□ 0.3
CXCL12-207ENST00000488591 MCM7P33993 719 aa16.95■□□□□ 0.3
CXCL12-207ENST00000488591 TRIM71Q2Q1W2 868 aaKnown RBP16.95■□□□□ 0.3
CXCL12-207ENST00000488591 C9orf50Q5SZB4 431 aa16.95■□□□□ 0.3
CXCL12-207ENST00000488591 ZNF618Q5T7W0 954 aa16.95■□□□□ 0.3
CXCL12-207ENST00000488591 B3GNT9Q6UX72 402 aa16.95■□□□□ 0.3
CXCL12-207ENST00000488591 DEFB128Q7Z7B8 93 aa16.95■□□□□ 0.3
CXCL12-207ENST00000488591 INTS4Q96HW7 963 aaKnown RBP16.95■□□□□ 0.3
CXCL12-207ENST00000488591 RNPC3Q96LT9 517 aaKnown RBP16.95■□□□□ 0.3
CXCL12-207ENST00000488591 FTOQ9C0B1 505 aaKnown RBP eCLIP16.95■□□□□ 0.3
CXCL12-207ENST00000488591 PCDHA12Q9UN75 941 aa16.95■□□□□ 0.3
CXCL12-207ENST00000488591 CEP131Q9UPN4 1083 aa16.95■□□□□ 0.3
CXCL12-207ENST00000488591 IGSF9BQ9UPX0 1349 aa16.95■□□□□ 0.3
CXCL12-207ENST00000488591 COL1A2P08123 1366 aa16.94■□□□□ 0.3
CXCL12-207ENST00000488591 MBLAC1A4D2B0 266 aaPredicted RBP16.94■□□□□ 0.3
CXCL12-207ENST00000488591 RSPH10B2B2RC85 870 aa16.94■□□□□ 0.3
CXCL12-207ENST00000488591 KIF28PB7ZC32 967 aa16.94■□□□□ 0.3
CXCL12-207ENST00000488591 DKC1O60832 514 aaKnown RBP eCLIP16.94■□□□□ 0.3
CXCL12-207ENST00000488591 RSPH10BP0C881 870 aa16.94■□□□□ 0.3
CXCL12-207ENST00000488591 TTC38Q5R3I4 469 aa16.94■□□□□ 0.3
CXCL12-207ENST00000488591 TMEM240Q5SV17 173 aa16.94■□□□□ 0.3
CXCL12-207ENST00000488591 MARCH8Q5T0T0 291 aa16.94■□□□□ 0.3
CXCL12-207ENST00000488591 ZNF365Q70YC5 407 aa16.94■□□□□ 0.3
CXCL12-207ENST00000488591 C16orf59Q7L2K0 433 aa16.94■□□□□ 0.3
CXCL12-207ENST00000488591 TRMT1LQ7Z2T5 733 aaKnown RBP16.94■□□□□ 0.3
CXCL12-207ENST00000488591 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.94■□□□□ 0.3
CXCL12-207ENST00000488591 VAV3Q9UKW4 847 aa16.94■□□□□ 0.3
CXCL12-207ENST00000488591 ACTN1P12814 892 aa16.93■□□□□ 0.3
CXCL12-207ENST00000488591 ATP4AP20648 1035 aa16.93■□□□□ 0.3
CXCL12-207ENST00000488591 TXKP42681 527 aa16.93■□□□□ 0.3
CXCL12-207ENST00000488591 PSMC5P62195 406 aa16.93■□□□□ 0.3
CXCL12-207ENST00000488591 ZNF174Q15697 407 aa16.93■□□□□ 0.3
CXCL12-207ENST00000488591 LRIT3Q3SXY7 679 aa16.93■□□□□ 0.3
CXCL12-207ENST00000488591 NCAPH2Q6IBW4 605 aa16.93■□□□□ 0.3
CXCL12-207ENST00000488591 RPAINQ86UA6 219 aa16.93■□□□□ 0.3
CXCL12-207ENST00000488591 WNT8BQ93098 351 aa16.93■□□□□ 0.3
CXCL12-207ENST00000488591 TTC12Q9H892 705 aaPredicted RBP16.93■□□□□ 0.3
CXCL12-207ENST00000488591 PCDHA2Q9Y5H9 948 aa16.93■□□□□ 0.3
CXCL12-207ENST00000488591 TRIOBPQ9H2D6 2365 aa16.93■□□□□ 0.3
CXCL12-207ENST00000488591 EML1O00423 815 aa16.92■□□□□ 0.3
CXCL12-207ENST00000488591 WNT7AO00755 349 aa16.92■□□□□ 0.3
CXCL12-207ENST00000488591 OATP04181 439 aa16.92■□□□□ 0.3
CXCL12-207ENST00000488591 P4HBP07237 508 aaKnown RBP16.92■□□□□ 0.3
CXCL12-207ENST00000488591 HSP90AA1P07900 732 aaKnown RBP16.92■□□□□ 0.3
CXCL12-207ENST00000488591 KLRC1P26715 233 aa16.92■□□□□ 0.3
CXCL12-207ENST00000488591 PRKCEQ02156 737 aa16.92■□□□□ 0.3
CXCL12-207ENST00000488591 EPHA7Q15375 998 aa16.92■□□□□ 0.3
CXCL12-207ENST00000488591 MTHFD1LQ6UB35 978 aa16.92■□□□□ 0.3
CXCL12-207ENST00000488591 RUFY4Q6ZNE9 571 aa16.92■□□□□ 0.3
CXCL12-207ENST00000488591 NME8Q8N427 588 aa16.92■□□□□ 0.3
CXCL12-207ENST00000488591 TRAPPC12Q8WVT3 735 aa16.92■□□□□ 0.3
CXCL12-207ENST00000488591 HERVK_113Q902F9 699 aa16.92■□□□□ 0.3
CXCL12-207ENST00000488591 MTMR9Q96QG7 549 aa16.92■□□□□ 0.3
CXCL12-207ENST00000488591 TANC1Q9C0D5 1861 aa16.92■□□□□ 0.3
CXCL12-207ENST00000488591 M0QZ92 97 aa16.91■□□□□ 0.3
CXCL12-207ENST00000488591 MAGEB2O15479 319 aa16.91■□□□□ 0.3
CXCL12-207ENST00000488591 ZNF862O60290 1169 aa16.91■□□□□ 0.3
CXCL12-207ENST00000488591 QARSP47897 775 aaKnown RBP16.91■□□□□ 0.3
CXCL12-207ENST00000488591 UGCGQ16739 394 aa16.91■□□□□ 0.3
CXCL12-207ENST00000488591 RILPL1Q5EBL4 403 aa16.91■□□□□ 0.3
CXCL12-207ENST00000488591 XKR3Q5GH77 459 aa16.91■□□□□ 0.3
CXCL12-207ENST00000488591 IER5Q5VY09 327 aa16.91■□□□□ 0.3
CXCL12-207ENST00000488591 OTOP2Q7RTS6 562 aa16.91■□□□□ 0.3
CXCL12-207ENST00000488591 BANK1Q8NDB2 785 aa16.91■□□□□ 0.3
CXCL12-207ENST00000488591 DNAJB3Q8WWF6 145 aa16.91■□□□□ 0.3
CXCL12-207ENST00000488591 FAM49AQ9H0Q0 323 aaPredicted RBP16.91■□□□□ 0.3
CXCL12-207ENST00000488591 WDR81Q562E7 1941 aa16.91■□□□□ 0.3
CXCL12-207ENST00000488591 SMIM35A0A1B0GVV1 85 aa16.9■□□□□ 0.3
CXCL12-207ENST00000488591 VPS37CA5D8V6 355 aaPredicted RBP16.9■□□□□ 0.3
CXCL12-207ENST00000488591 DDX11L8A8MPP1 907 aa16.9■□□□□ 0.3
CXCL12-207ENST00000488591 NBNO60934 754 aa16.9■□□□□ 0.3
CXCL12-207ENST00000488591 CTSHP09668 335 aa16.9■□□□□ 0.3
CXCL12-207ENST00000488591 OR52Z1P0C646 297 aa16.9■□□□□ 0.3
CXCL12-207ENST00000488591 TMEM266Q2M3C6 531 aa16.9■□□□□ 0.3
CXCL12-207ENST00000488591 FAM26DQ5JW98 314 aa16.9■□□□□ 0.3
CXCL12-207ENST00000488591 TMEM60Q9H2L4 133 aa16.9■□□□□ 0.3
CXCL12-207ENST00000488591 FOXD4L1Q9NU39 408 aa16.9■□□□□ 0.3
CXCL12-207ENST00000488591 SEPT9Q9UHD8 586 aaPredicted RBP16.9■□□□□ 0.3
CXCL12-207ENST00000488591 SCN5AQ14524 2016 aa16.9■□□□□ 0.3
CXCL12-207ENST00000488591 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.89■□□□□ 0.29
CXCL12-207ENST00000488591 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.89■□□□□ 0.29
CXCL12-207ENST00000488591 ZBBXA8MT70 800 aa16.89■□□□□ 0.29
CXCL12-207ENST00000488591 ZBTB42B2RXF5 422 aa16.89■□□□□ 0.29
CXCL12-207ENST00000488591 CXCL10P02778 98 aa16.89■□□□□ 0.29
CXCL12-207ENST00000488591 TMOD1P28289 359 aa16.89■□□□□ 0.29
CXCL12-207ENST00000488591 TOB1P50616 345 aaPredicted RBP16.89■□□□□ 0.29
CXCL12-207ENST00000488591 FXR1P51114 621 aaKnown RBP eCLIP16.89■□□□□ 0.29
CXCL12-207ENST00000488591 SPIRE1Q08AE8 756 aa16.89■□□□□ 0.29
CXCL12-207ENST00000488591 CNKSR3Q6P9H4 555 aa16.89■□□□□ 0.29
CXCL12-207ENST00000488591 TRAF7Q6Q0C0 670 aa16.89■□□□□ 0.29
CXCL12-207ENST00000488591 BRAPQ7Z569 592 aa16.89■□□□□ 0.29
CXCL12-207ENST00000488591 NEK9Q8TD19 979 aa16.89■□□□□ 0.29
CXCL12-207ENST00000488591 ZBTB10Q96DT7 871 aa16.89■□□□□ 0.29
CXCL12-207ENST00000488591 NIFKQ9BYG3 293 aaKnown RBP16.89■□□□□ 0.29
CXCL12-207ENST00000488591 ZSWIM4Q9H7M6 989 aa16.89■□□□□ 0.29
CXCL12-207ENST00000488591 LAD1O00515 517 aa16.88■□□□□ 0.29
CXCL12-207ENST00000488591 BAIAP3O94812 1187 aa16.88■□□□□ 0.29
CXCL12-207ENST00000488591 C22orf31O95567 290 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms