RNA–Protein interactions for RNA: ENST00000488235.1

PCYT1A-215, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 3

Gene PCYT1A, Length 466 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-215ENST00000488235 CYP3A4P08684 503 aa12.78□□□□□ -0.36
PCYT1A-215ENST00000488235 PDIA3P30101 505 aaKnown RBP12.78□□□□□ -0.36
PCYT1A-215ENST00000488235 ZNF76P36508 570 aa12.78□□□□□ -0.36
PCYT1A-215ENST00000488235 CCT2P78371 535 aaKnown RBP12.78□□□□□ -0.36
PCYT1A-215ENST00000488235 TOB2Q14106 344 aaPredicted RBP12.78□□□□□ -0.36
PCYT1A-215ENST00000488235 POTEBQ6S5H4 581 aa12.78□□□□□ -0.36
PCYT1A-215ENST00000488235 TSHZ1Q6ZSZ6 1077 aa12.78□□□□□ -0.36
PCYT1A-215ENST00000488235 NIPA1Q7RTP0 329 aa12.78□□□□□ -0.36
PCYT1A-215ENST00000488235 TMEM192Q8IY95 271 aa12.78□□□□□ -0.36
PCYT1A-215ENST00000488235 CRIPAKQ8N1N5 446 aa12.78□□□□□ -0.36
PCYT1A-215ENST00000488235 LENG9Q96B70 501 aa12.78□□□□□ -0.36
PCYT1A-215ENST00000488235 TMX1Q9H3N1 280 aa12.78□□□□□ -0.36
PCYT1A-215ENST00000488235 AZI2Q9H6S1 392 aa12.78□□□□□ -0.36
PCYT1A-215ENST00000488235 CDHR5Q9HBB8 845 aa12.78□□□□□ -0.36
PCYT1A-215ENST00000488235 VPS54Q9P1Q0 977 aa12.78□□□□□ -0.36
PCYT1A-215ENST00000488235 RAPGEFL1Q9UHV5 662 aa12.78□□□□□ -0.36
PCYT1A-215ENST00000488235 COG5Q9UP83 839 aa12.78□□□□□ -0.36
PCYT1A-215ENST00000488235 PCDHA2Q9Y5H9 948 aa12.78□□□□□ -0.36
PCYT1A-215ENST00000488235 RRN3P2A6NIE6 340 aa12.77□□□□□ -0.37
PCYT1A-215ENST00000488235 EVCP57679 992 aa12.77□□□□□ -0.37
PCYT1A-215ENST00000488235 TMEM266Q2M3C6 531 aa12.77□□□□□ -0.37
PCYT1A-215ENST00000488235 MTHFD1LQ6UB35 978 aa12.77□□□□□ -0.37
PCYT1A-215ENST00000488235 RSPH3Q86UC2 560 aa12.77□□□□□ -0.37
PCYT1A-215ENST00000488235 TEX2Q8IWB9 1127 aa12.77□□□□□ -0.37
PCYT1A-215ENST00000488235 REXO1Q8N1G1 1221 aaKnown RBP12.77□□□□□ -0.37
PCYT1A-215ENST00000488235 KHSRPQ92945 711 aaKnown RBP eCLIP12.77□□□□□ -0.37
PCYT1A-215ENST00000488235 GJA10Q969M2 543 aa12.77□□□□□ -0.37
PCYT1A-215ENST00000488235 ZNF689Q96CS4 500 aaPredicted RBP12.77□□□□□ -0.37
PCYT1A-215ENST00000488235 MRPL38Q96DV4 380 aaKnown RBP12.77□□□□□ -0.37
PCYT1A-215ENST00000488235 SLC26A6Q9BXS9 759 aa12.77□□□□□ -0.37
PCYT1A-215ENST00000488235 CD320Q9NPF0 282 aa12.77□□□□□ -0.37
PCYT1A-215ENST00000488235 PADI3Q9ULW8 664 aa12.77□□□□□ -0.37
PCYT1A-215ENST00000488235 TRPV2Q9Y5S1 764 aa12.77□□□□□ -0.37
PCYT1A-215ENST00000488235 TTC3P53804 2025 aa12.76□□□□□ -0.37
PCYT1A-215ENST00000488235 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.76□□□□□ -0.37
PCYT1A-215ENST00000488235 CCDC196A0A1B0GTZ2 297 aa12.76□□□□□ -0.37
PCYT1A-215ENST00000488235 H3BNC9 293 aa12.76□□□□□ -0.37
PCYT1A-215ENST00000488235 MGEA5O60502 916 aa12.76□□□□□ -0.37
PCYT1A-215ENST00000488235 IFNAR1P17181 557 aa12.76□□□□□ -0.37
PCYT1A-215ENST00000488235 KLRC1P26715 233 aa12.76□□□□□ -0.37
PCYT1A-215ENST00000488235 GATMP50440 423 aa12.76□□□□□ -0.37
PCYT1A-215ENST00000488235 GPM6BQ13491 265 aa12.76□□□□□ -0.37
PCYT1A-215ENST00000488235 AAK1Q2M2I8 961 aa12.76□□□□□ -0.37
PCYT1A-215ENST00000488235 PRR16Q569H4 304 aa12.76□□□□□ -0.37
PCYT1A-215ENST00000488235 SWSAP1Q6NVH7 229 aa12.76□□□□□ -0.37
PCYT1A-215ENST00000488235 RUFY3Q7L099 469 aa12.76□□□□□ -0.37
PCYT1A-215ENST00000488235 TRMT1LQ7Z2T5 733 aaKnown RBP12.76□□□□□ -0.37
PCYT1A-215ENST00000488235 KIAA0319LQ8IZA0 1049 aa12.76□□□□□ -0.37
PCYT1A-215ENST00000488235 IL27Q8NEV9 243 aa12.76□□□□□ -0.37
PCYT1A-215ENST00000488235 ATP8B4Q8TF62 1192 aa12.76□□□□□ -0.37
PCYT1A-215ENST00000488235 TMEM40Q8WWA1 233 aa12.76□□□□□ -0.37
PCYT1A-215ENST00000488235 IL17RAQ96F46 866 aa12.76□□□□□ -0.37
PCYT1A-215ENST00000488235 PPP1R16BQ96T49 567 aa12.76□□□□□ -0.37
PCYT1A-215ENST00000488235 ZNF577Q9BSK1 485 aa12.76□□□□□ -0.37
PCYT1A-215ENST00000488235 CELF4Q9BZC1 486 aaKnown RBP12.76□□□□□ -0.37
PCYT1A-215ENST00000488235 UPF3BQ9BZI7 483 aaKnown RBP12.76□□□□□ -0.37
PCYT1A-215ENST00000488235 GLT8D2Q9H1C3 349 aa12.76□□□□□ -0.37
PCYT1A-215ENST00000488235 UBE2ZQ9H832 354 aaPredicted RBP12.76□□□□□ -0.37
PCYT1A-215ENST00000488235 ZSWIM6Q9HCJ5 1215 aa12.76□□□□□ -0.37
PCYT1A-215ENST00000488235 ADGRA3Q8IWK6 1321 aa12.76□□□□□ -0.37
PCYT1A-215ENST00000488235 IGSF9BQ9UPX0 1349 aa12.76□□□□□ -0.37
PCYT1A-215ENST00000488235 SMIM35A0A1B0GVV1 85 aa12.75□□□□□ -0.37
PCYT1A-215ENST00000488235 BACH1O14867 736 aa12.75□□□□□ -0.37
PCYT1A-215ENST00000488235 GRM6O15303 877 aa12.75□□□□□ -0.37
PCYT1A-215ENST00000488235 DGKIO75912 1065 aa12.75□□□□□ -0.37
PCYT1A-215ENST00000488235 KCNA5P22460 613 aa12.75□□□□□ -0.37
PCYT1A-215ENST00000488235 CIITAP33076 1130 aa12.75□□□□□ -0.37
PCYT1A-215ENST00000488235 NPY5RQ15761 445 aa12.75□□□□□ -0.37
PCYT1A-215ENST00000488235 TCEAL5Q5H9L2 206 aa12.75□□□□□ -0.37
PCYT1A-215ENST00000488235 IER5Q5VY09 327 aa12.75□□□□□ -0.37
PCYT1A-215ENST00000488235 PDXDC2PQ6P474 469 aa12.75□□□□□ -0.37
PCYT1A-215ENST00000488235 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.75□□□□□ -0.37
PCYT1A-215ENST00000488235 AIFM3Q96NN9 605 aa12.75□□□□□ -0.37
PCYT1A-215ENST00000488235 RNF26Q9BY78 433 aaPredicted RBP12.75□□□□□ -0.37
PCYT1A-215ENST00000488235 C6orf50Q9HD87 102 aa12.75□□□□□ -0.37
PCYT1A-215ENST00000488235 ZNF302Q9NR11 478 aa12.75□□□□□ -0.37
PCYT1A-215ENST00000488235 MAFBQ9Y5Q3 323 aaPredicted RBP12.75□□□□□ -0.37
PCYT1A-215ENST00000488235 ATG2AQ2TAZ0 1938 aa12.74□□□□□ -0.37
PCYT1A-215ENST00000488235 ZNF862O60290 1169 aa12.74□□□□□ -0.37
PCYT1A-215ENST00000488235 HBP1O60381 514 aa12.74□□□□□ -0.37
PCYT1A-215ENST00000488235 REC8O95072 547 aa12.74□□□□□ -0.37
PCYT1A-215ENST00000488235 CSPG5O95196 566 aa12.74□□□□□ -0.37
PCYT1A-215ENST00000488235 C22orf31O95567 290 aa12.74□□□□□ -0.37
PCYT1A-215ENST00000488235 CTNNB1P35222 781 aa12.74□□□□□ -0.37
PCYT1A-215ENST00000488235 SLC26A2P50443 739 aa12.74□□□□□ -0.37
PCYT1A-215ENST00000488235 KRT76Q01546 638 aa12.74□□□□□ -0.37
PCYT1A-215ENST00000488235 CAMK1Q14012 370 aa12.74□□□□□ -0.37
PCYT1A-215ENST00000488235 UGCGQ16739 394 aa12.74□□□□□ -0.37
PCYT1A-215ENST00000488235 MIS18BP1Q6P0N0 1132 aa12.74□□□□□ -0.37
PCYT1A-215ENST00000488235 FIBCD1Q8N539 461 aa12.74□□□□□ -0.37
PCYT1A-215ENST00000488235 BANK1Q8NDB2 785 aa12.74□□□□□ -0.37
PCYT1A-215ENST00000488235 CLP1Q92989 425 aaKnown RBP12.74□□□□□ -0.37
PCYT1A-215ENST00000488235 SAMD11Q96NU1 681 aa12.74□□□□□ -0.37
PCYT1A-215ENST00000488235 GINS2Q9Y248 185 aa12.74□□□□□ -0.37
PCYT1A-215ENST00000488235 NOC2LQ9Y3T9 749 aaKnown RBP12.74□□□□□ -0.37
PCYT1A-215ENST00000488235 MRPL42Q9Y6G3 142 aaKnown RBP12.74□□□□□ -0.37
PCYT1A-215ENST00000488235 LOXHD1Q8IVV2 1947 aa12.74□□□□□ -0.37
PCYT1A-215ENST00000488235 NLRC5Q86WI3 1866 aa12.74□□□□□ -0.37
PCYT1A-215ENST00000488235 KDM3AQ9Y4C1 1321 aa12.73□□□□□ -0.37
PCYT1A-215ENST00000488235 C5orf67F2Z3F1 127 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms