RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 POTEBQ6S5H4 581 aa12.41□□□□□ -0.42
UBE4B-210ENST00000488228 ATP6V0A1Q93050 837 aa12.41□□□□□ -0.42
UBE4B-210ENST00000488228 WNT8BQ93098 351 aa12.41□□□□□ -0.42
UBE4B-210ENST00000488228 DYDC2Q96IM9 177 aa12.41□□□□□ -0.42
UBE4B-210ENST00000488228 EIF2AK1Q9BQI3 630 aaKnown RBP12.41□□□□□ -0.42
UBE4B-210ENST00000488228 SEPT9Q9UHD8 586 aaPredicted RBP12.41□□□□□ -0.42
UBE4B-210ENST00000488228 TBX21Q9UL17 535 aa12.41□□□□□ -0.42
UBE4B-210ENST00000488228 NOD1Q9Y239 953 aa12.41□□□□□ -0.42
UBE4B-210ENST00000488228 RBM19Q9Y4C8 960 aaKnown RBP12.41□□□□□ -0.42
UBE4B-210ENST00000488228 MYH11P35749 1972 aa12.41□□□□□ -0.42
UBE4B-210ENST00000488228 UMODL1Q5DID0 1318 aa12.4□□□□□ -0.42
UBE4B-210ENST00000488228 TET1Q8NFU7 2136 aa12.4□□□□□ -0.42
UBE4B-210ENST00000488228 ZBTB42B2RXF5 422 aa12.4□□□□□ -0.42
UBE4B-210ENST00000488228 TLR3O15455 904 aaKnown RBP12.4□□□□□ -0.42
UBE4B-210ENST00000488228 TREHO43280 583 aa12.4□□□□□ -0.42
UBE4B-210ENST00000488228 INSRRP14616 1297 aa12.4□□□□□ -0.42
UBE4B-210ENST00000488228 PRPHP41219 470 aa12.4□□□□□ -0.42
UBE4B-210ENST00000488228 SLC26A2P50443 739 aa12.4□□□□□ -0.42
UBE4B-210ENST00000488228 GRIN1Q05586 938 aa12.4□□□□□ -0.42
UBE4B-210ENST00000488228 PLA2G4FQ68DD2 849 aa12.4□□□□□ -0.42
UBE4B-210ENST00000488228 DHX38Q92620 1227 aaKnown RBP12.4□□□□□ -0.42
UBE4B-210ENST00000488228 FAM167AQ96KS9 214 aa12.4□□□□□ -0.42
UBE4B-210ENST00000488228 TOX2Q96NM4 488 aa12.4□□□□□ -0.42
UBE4B-210ENST00000488228 PPP1R12CQ9BZL4 782 aa12.4□□□□□ -0.42
UBE4B-210ENST00000488228 TUBE1Q9UJT0 475 aa12.4□□□□□ -0.42
UBE4B-210ENST00000488228 TRIM43BA6NCK2 446 aa12.39□□□□□ -0.43
UBE4B-210ENST00000488228 MED24O75448 989 aa12.39□□□□□ -0.43
UBE4B-210ENST00000488228 STBD1O95210 358 aa12.39□□□□□ -0.43
UBE4B-210ENST00000488228 BMP15O95972 392 aa12.39□□□□□ -0.43
UBE4B-210ENST00000488228 P4HBP07237 508 aaKnown RBP12.39□□□□□ -0.43
UBE4B-210ENST00000488228 PDIA4P13667 645 aaKnown RBP12.39□□□□□ -0.43
UBE4B-210ENST00000488228 ITGB8P26012 769 aa12.39□□□□□ -0.43
UBE4B-210ENST00000488228 MARCKSP29966 332 aaPredicted RBP12.39□□□□□ -0.43
UBE4B-210ENST00000488228 CDC25AP30304 524 aa12.39□□□□□ -0.43
UBE4B-210ENST00000488228 QARSP47897 775 aaKnown RBP12.39□□□□□ -0.43
UBE4B-210ENST00000488228 NASPP49321 788 aaPredicted RBP12.39□□□□□ -0.43
UBE4B-210ENST00000488228 PSMC5P62195 406 aa12.39□□□□□ -0.43
UBE4B-210ENST00000488228 DNM1Q05193 864 aaKnown RBP12.39□□□□□ -0.43
UBE4B-210ENST00000488228 STK38Q15208 465 aa12.39□□□□□ -0.43
UBE4B-210ENST00000488228 POTEGQ6S5H5 508 aa12.39□□□□□ -0.43
UBE4B-210ENST00000488228 DTHD1Q6ZMT9 781 aa12.39□□□□□ -0.43
UBE4B-210ENST00000488228 RUFY4Q6ZNE9 571 aa12.39□□□□□ -0.43
UBE4B-210ENST00000488228 TPH2Q8IWU9 490 aa12.39□□□□□ -0.43
UBE4B-210ENST00000488228 IGSF22Q8N9C0 903 aa12.39□□□□□ -0.43
UBE4B-210ENST00000488228 SNX29Q8TEQ0 813 aa12.39□□□□□ -0.43
UBE4B-210ENST00000488228 BBXQ8WY36 941 aaPredicted RBP12.39□□□□□ -0.43
UBE4B-210ENST00000488228 TRIM43Q96BQ3 446 aaPredicted RBP12.39□□□□□ -0.43
UBE4B-210ENST00000488228 ZNF396Q96N95 335 aaPredicted RBP12.39□□□□□ -0.43
UBE4B-210ENST00000488228 SH2D3AQ9BRG2 576 aa12.39□□□□□ -0.43
UBE4B-210ENST00000488228 NOC4LQ9BVI4 516 aaKnown RBP12.39□□□□□ -0.43
UBE4B-210ENST00000488228 SEZ6LQ9BYH1 1024 aa12.39□□□□□ -0.43
UBE4B-210ENST00000488228 TMEM39AQ9NV64 488 aa12.39□□□□□ -0.43
UBE4B-210ENST00000488228 TFIP11Q9UBB9 837 aaKnown RBP12.39□□□□□ -0.43
UBE4B-210ENST00000488228 LRWD1Q9UFC0 647 aa12.39□□□□□ -0.43
UBE4B-210ENST00000488228 CEP131Q9UPN4 1083 aa12.39□□□□□ -0.43
UBE4B-210ENST00000488228 COL1A2P08123 1366 aa12.39□□□□□ -0.43
UBE4B-210ENST00000488228 NRCAMQ92823 1304 aa12.38□□□□□ -0.43
UBE4B-210ENST00000488228 H0YGN5 161 aa12.38□□□□□ -0.43
UBE4B-210ENST00000488228 KIAA0355O15063 1070 aa12.38□□□□□ -0.43
UBE4B-210ENST00000488228 HBP1O60381 514 aa12.38□□□□□ -0.43
UBE4B-210ENST00000488228 SLITRK3O94933 977 aa12.38□□□□□ -0.43
UBE4B-210ENST00000488228 SPATA31C1P0DKV0 1188 aa12.38□□□□□ -0.43
UBE4B-210ENST00000488228 CCT6AP40227 531 aaKnown RBP12.38□□□□□ -0.43
UBE4B-210ENST00000488228 ADAM17P78536 824 aa12.38□□□□□ -0.43
UBE4B-210ENST00000488228 MTERF2Q49AM1 385 aa12.38□□□□□ -0.43
UBE4B-210ENST00000488228 MARCH8Q5T0T0 291 aa12.38□□□□□ -0.43
UBE4B-210ENST00000488228 ARL6IP4Q66PJ3 421 aaKnown RBP12.38□□□□□ -0.43
UBE4B-210ENST00000488228 ANO5Q75V66 913 aa12.38□□□□□ -0.43
UBE4B-210ENST00000488228 SERINC5Q86VE9 423 aa12.38□□□□□ -0.43
UBE4B-210ENST00000488228 ERMNQ8TAM6 284 aa12.38□□□□□ -0.43
UBE4B-210ENST00000488228 NEK9Q8TD19 979 aa12.38□□□□□ -0.43
UBE4B-210ENST00000488228 HSD17B14Q9BPX1 270 aa12.38□□□□□ -0.43
UBE4B-210ENST00000488228 RAB34Q9BZG1 259 aa12.38□□□□□ -0.43
UBE4B-210ENST00000488228 HIPK3Q9H422 1215 aa12.38□□□□□ -0.43
UBE4B-210ENST00000488228 PRKAG2Q9UGJ0 569 aa12.38□□□□□ -0.43
UBE4B-210ENST00000488228 FBXO2Q9UK22 296 aaPredicted RBP12.38□□□□□ -0.43
UBE4B-210ENST00000488228 NR2E3Q9Y5X4 410 aa12.38□□□□□ -0.43
UBE4B-210ENST00000488228 PTPRSQ13332 1948 aa12.38□□□□□ -0.43
UBE4B-210ENST00000488228 MICAL3Q7RTP6 2002 aa12.38□□□□□ -0.43
UBE4B-210ENST00000488228 A0A087WWV3 80 aa12.37□□□□□ -0.43
UBE4B-210ENST00000488228 MBLAC1A4D2B0 266 aaPredicted RBP12.37□□□□□ -0.43
UBE4B-210ENST00000488228 DDX11L8A8MPP1 907 aa12.37□□□□□ -0.43
UBE4B-210ENST00000488228 ZBTB39O15060 712 aa12.37□□□□□ -0.43
UBE4B-210ENST00000488228 C22orf31O95567 290 aa12.37□□□□□ -0.43
UBE4B-210ENST00000488228 CTSHP09668 335 aa12.37□□□□□ -0.43
UBE4B-210ENST00000488228 NCLP19338 710 aaKnown RBP12.37□□□□□ -0.43
UBE4B-210ENST00000488228 YWHABP31946 246 aaKnown RBP12.37□□□□□ -0.43
UBE4B-210ENST00000488228 CYP2C18P33260 490 aa12.37□□□□□ -0.43
UBE4B-210ENST00000488228 NPEPPSP55786 919 aa12.37□□□□□ -0.43
UBE4B-210ENST00000488228 ZRSR1Q15695 479 aaKnown RBP12.37□□□□□ -0.43
UBE4B-210ENST00000488228 ECM1Q16610 540 aa12.37□□□□□ -0.43
UBE4B-210ENST00000488228 TRIM71Q2Q1W2 868 aaKnown RBP12.37□□□□□ -0.43
UBE4B-210ENST00000488228 XKR3Q5GH77 459 aa12.37□□□□□ -0.43
UBE4B-210ENST00000488228 HAUS3Q68CZ6 603 aa12.37□□□□□ -0.43
UBE4B-210ENST00000488228 CATSPER3Q86XQ3 398 aa12.37□□□□□ -0.43
UBE4B-210ENST00000488228 ZNF579Q8NAF0 562 aaKnown RBP12.37□□□□□ -0.43
UBE4B-210ENST00000488228 CLIC6Q96NY7 704 aa12.37□□□□□ -0.43
UBE4B-210ENST00000488228 MMTAG2Q9BU76 263 aaKnown RBP12.37□□□□□ -0.43
UBE4B-210ENST00000488228 FAM49AQ9H0Q0 323 aaPredicted RBP12.37□□□□□ -0.43
UBE4B-210ENST00000488228 WNT8AQ9H1J5 351 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms