RNA–Protein interactions for RNA: ENST00000488217.1

TRIM50-203, Transcript of tripartite motif containing 50, humanhuman

TSL 2

Gene TRIM50, Length 548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-203ENST00000488217 LINC00271P0C7V0 271 aa17.44■□□□□ 0.38
TRIM50-203ENST00000488217 KLRC1P26715 233 aa17.44■□□□□ 0.38
TRIM50-203ENST00000488217 CTNNB1P35222 781 aa17.44■□□□□ 0.38
TRIM50-203ENST00000488217 PTCRAQ6ISU1 281 aaPredicted RBP17.44■□□□□ 0.38
TRIM50-203ENST00000488217 MTHFD1LQ6UB35 978 aa17.44■□□□□ 0.38
TRIM50-203ENST00000488217 PLA2G4DQ86XP0 818 aa17.44■□□□□ 0.38
TRIM50-203ENST00000488217 GJD3Q8N144 294 aa17.44■□□□□ 0.38
TRIM50-203ENST00000488217 CRIPAKQ8N1N5 446 aa17.44■□□□□ 0.38
TRIM50-203ENST00000488217 KCNB2Q92953 911 aa17.44■□□□□ 0.38
TRIM50-203ENST00000488217 PABPC5Q96DU9 382 aaKnown RBP17.44■□□□□ 0.38
TRIM50-203ENST00000488217 C11orf84Q9BUA3 381 aaPredicted RBP17.44■□□□□ 0.38
TRIM50-203ENST00000488217 LMAN2LQ9H0V9 348 aa17.44■□□□□ 0.38
TRIM50-203ENST00000488217 TRPV2Q9Y5S1 764 aa17.44■□□□□ 0.38
TRIM50-203ENST00000488217 FAM86B1E9PN63 330 aa17.43■□□□□ 0.38
TRIM50-203ENST00000488217 PI4K2BG5E9Z4 385 aa17.43■□□□□ 0.38
TRIM50-203ENST00000488217 BACH1O14867 736 aa17.43■□□□□ 0.38
TRIM50-203ENST00000488217 GRM6O15303 877 aa17.43■□□□□ 0.38
TRIM50-203ENST00000488217 HBP1O60381 514 aa17.43■□□□□ 0.38
TRIM50-203ENST00000488217 FAM86B2P0C5J1 330 aa17.43■□□□□ 0.38
TRIM50-203ENST00000488217 METAP2P50579 478 aaKnown RBP eCLIP17.43■□□□□ 0.38
TRIM50-203ENST00000488217 KRT76Q01546 638 aa17.43■□□□□ 0.38
TRIM50-203ENST00000488217 COL19A1Q14993 1142 aa17.43■□□□□ 0.38
TRIM50-203ENST00000488217 FAM160B1Q5W0V3 765 aa17.43■□□□□ 0.38
TRIM50-203ENST00000488217 MCTP2Q6DN12 878 aa17.43■□□□□ 0.38
TRIM50-203ENST00000488217 SWSAP1Q6NVH7 229 aa17.43■□□□□ 0.38
TRIM50-203ENST00000488217 FAM43BQ6ZT52 329 aaPredicted RBP17.43■□□□□ 0.38
TRIM50-203ENST00000488217 EP400NLQ6ZTU2 488 aa17.43■□□□□ 0.38
TRIM50-203ENST00000488217 Q6ZUG5 572 aa17.43■□□□□ 0.38
TRIM50-203ENST00000488217 CRYGNQ8WXF5 182 aa17.43■□□□□ 0.38
TRIM50-203ENST00000488217 LRFN3Q9BTN0 628 aa17.43■□□□□ 0.38
TRIM50-203ENST00000488217 PLVAPQ9BX97 442 aa17.43■□□□□ 0.38
TRIM50-203ENST00000488217 RC3H2Q9HBD1 1191 aaKnown RBP17.43■□□□□ 0.38
TRIM50-203ENST00000488217 C6orf50Q9HD87 102 aa17.43■□□□□ 0.38
TRIM50-203ENST00000488217 H3BQ06 376 aaPredicted RBP17.42■□□□□ 0.38
TRIM50-203ENST00000488217 DDX39AO00148 427 aaKnown RBP17.42■□□□□ 0.38
TRIM50-203ENST00000488217 IPO5O00410 1097 aaKnown RBP17.42■□□□□ 0.38
TRIM50-203ENST00000488217 PRPF3O43395 683 aaKnown RBP17.42■□□□□ 0.38
TRIM50-203ENST00000488217 SCG2P13521 617 aa17.42■□□□□ 0.38
TRIM50-203ENST00000488217 CPA1P15085 419 aa17.42■□□□□ 0.38
TRIM50-203ENST00000488217 IL9P15248 144 aa17.42■□□□□ 0.38
TRIM50-203ENST00000488217 APOBRQ0VD83 1088 aa17.42■□□□□ 0.38
TRIM50-203ENST00000488217 PAK2Q13177 524 aa17.42■□□□□ 0.38
TRIM50-203ENST00000488217 ZNF484Q5JVG2 852 aa17.42■□□□□ 0.38
TRIM50-203ENST00000488217 TMEM31Q5JXX7 168 aa17.42■□□□□ 0.38
TRIM50-203ENST00000488217 MIS18BP1Q6P0N0 1132 aa17.42■□□□□ 0.38
TRIM50-203ENST00000488217 KIAA0319LQ8IZA0 1049 aa17.42■□□□□ 0.38
TRIM50-203ENST00000488217 ATP8B4Q8TF62 1192 aa17.42■□□□□ 0.38
TRIM50-203ENST00000488217 LINC01599Q8WXQ3 324 aa17.42■□□□□ 0.38
TRIM50-203ENST00000488217 KHSRPQ92945 711 aaKnown RBP eCLIP17.42■□□□□ 0.38
TRIM50-203ENST00000488217 ZMYND12Q9H0C1 365 aa17.42■□□□□ 0.38
TRIM50-203ENST00000488217 ZNF302Q9NR11 478 aa17.42■□□□□ 0.38
TRIM50-203ENST00000488217 TBC1D22BQ9NU19 505 aa17.42■□□□□ 0.38
TRIM50-203ENST00000488217 PLAGL2Q9UPG8 496 aa17.42■□□□□ 0.38
TRIM50-203ENST00000488217 TCF20Q9UGU0 1960 aaKnown RBP17.42■□□□□ 0.38
TRIM50-203ENST00000488217 ADGRA3Q8IWK6 1321 aa17.42■□□□□ 0.38
TRIM50-203ENST00000488217 IGSF9BQ9UPX0 1349 aa17.42■□□□□ 0.38
TRIM50-203ENST00000488217 KDM3AQ9Y4C1 1321 aa17.42■□□□□ 0.38
TRIM50-203ENST00000488217 PTPRSQ13332 1948 aa17.41■□□□□ 0.38
TRIM50-203ENST00000488217 IGLV3-22A0A075B6J6 115 aa17.41■□□□□ 0.38
TRIM50-203ENST00000488217 GPR37L1O60883 481 aa17.41■□□□□ 0.38
TRIM50-203ENST00000488217 STAG3L1P0CL83 205 aa17.41■□□□□ 0.38
TRIM50-203ENST00000488217 NFX1Q12986 1120 aaKnown RBP17.41■□□□□ 0.38
TRIM50-203ENST00000488217 PDXDC2PQ6P474 469 aa17.41■□□□□ 0.38
TRIM50-203ENST00000488217 NPAS4Q8IUM7 802 aa17.41■□□□□ 0.38
TRIM50-203ENST00000488217 FBXL16Q8N461 479 aa17.41■□□□□ 0.38
TRIM50-203ENST00000488217 CCDC12Q8WUD4 166 aaPredicted RBP17.41■□□□□ 0.38
TRIM50-203ENST00000488217 BRF1Q92994 677 aa17.41■□□□□ 0.38
TRIM50-203ENST00000488217 JAKMIP1Q96N16 626 aaKnown RBP17.41■□□□□ 0.38
TRIM50-203ENST00000488217 UIMC1Q96RL1 719 aa17.41■□□□□ 0.38
TRIM50-203ENST00000488217 ZNF577Q9BSK1 485 aa17.41■□□□□ 0.38
TRIM50-203ENST00000488217 TMX1Q9H3N1 280 aa17.41■□□□□ 0.38
TRIM50-203ENST00000488217 CLDND1Q9NY35 253 aa17.41■□□□□ 0.38
TRIM50-203ENST00000488217 ESYT2A0FGR8 921 aa17.4■□□□□ 0.38
TRIM50-203ENST00000488217 ADAMTS3O15072 1205 aa17.4■□□□□ 0.38
TRIM50-203ENST00000488217 ATP4AP20648 1035 aa17.4■□□□□ 0.38
TRIM50-203ENST00000488217 GNA11P29992 359 aa17.4■□□□□ 0.38
TRIM50-203ENST00000488217 SSTR3P32745 418 aaPredicted RBP17.4■□□□□ 0.38
TRIM50-203ENST00000488217 HSPA4P34932 840 aa17.4■□□□□ 0.38
TRIM50-203ENST00000488217 LTBRP36941 435 aa17.4■□□□□ 0.38
TRIM50-203ENST00000488217 AKAP17AQ02040 695 aaKnown RBP17.4■□□□□ 0.38
TRIM50-203ENST00000488217 PKN1Q16512 942 aa17.4■□□□□ 0.38
TRIM50-203ENST00000488217 CTC1Q2NKJ3 1217 aa17.4■□□□□ 0.38
TRIM50-203ENST00000488217 NAALADL2Q58DX5 795 aa17.4■□□□□ 0.38
TRIM50-203ENST00000488217 BLOC1S2Q6QNY1 142 aa17.4■□□□□ 0.38
TRIM50-203ENST00000488217 CMTR2Q8IYT2 770 aaKnown RBP17.4■□□□□ 0.38
TRIM50-203ENST00000488217 CDHR5Q9HBB8 845 aa17.4■□□□□ 0.38
TRIM50-203ENST00000488217 ALG13Q9NP73 1137 aaKnown RBP17.4■□□□□ 0.38
TRIM50-203ENST00000488217 FAM50BQ9Y247 325 aa17.4■□□□□ 0.38
TRIM50-203ENST00000488217 PCDHB7Q9Y5E2 793 aa17.4■□□□□ 0.38
TRIM50-203ENST00000488217 MAFBQ9Y5Q3 323 aaPredicted RBP17.4■□□□□ 0.38
TRIM50-203ENST00000488217 SNX14Q9Y5W7 946 aa17.4■□□□□ 0.38
TRIM50-203ENST00000488217 MRPL42Q9Y6G3 142 aaKnown RBP17.4■□□□□ 0.38
TRIM50-203ENST00000488217 NCOR1O75376 2440 aa17.4■□□□□ 0.38
TRIM50-203ENST00000488217 RPS6KA5O75582 802 aa17.39■□□□□ 0.37
TRIM50-203ENST00000488217 CAMK1Q14012 370 aa17.39■□□□□ 0.37
TRIM50-203ENST00000488217 TMEM266Q2M3C6 531 aa17.39■□□□□ 0.37
TRIM50-203ENST00000488217 CCDC60Q8IWA6 550 aaPredicted RBP17.39■□□□□ 0.37
TRIM50-203ENST00000488217 CKAP2LQ8IYA6 745 aa17.39■□□□□ 0.37
TRIM50-203ENST00000488217 REXO1Q8N1G1 1221 aaKnown RBP17.39■□□□□ 0.37
TRIM50-203ENST00000488217 P2RX5Q93086 422 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms