RNA–Protein interactions for RNA: ENST00000488058.1

RNF38-208, Transcript of ring finger protein 38, humanhuman

TSL 3

Gene RNF38, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-208ENST00000488058 ATP8B4Q8TF62 1192 aa26.83■■□□□ 1.89
RNF38-208ENST00000488058 ZBED2Q9BTP6 218 aa26.83■■□□□ 1.89
RNF38-208ENST00000488058 PRDM12Q9H4Q4 367 aa26.83■■□□□ 1.89
RNF38-208ENST00000488058 GABBR1Q9UBS5 961 aa26.83■■□□□ 1.89
RNF38-208ENST00000488058 PCDHA10Q9Y5I2 948 aa26.83■■□□□ 1.89
RNF38-208ENST00000488058 SIP14410 1827 aa26.83■■□□□ 1.89
RNF38-208ENST00000488058 WDR64B1ANS9 1081 aa26.82■■□□□ 1.88
RNF38-208ENST00000488058 HBP1O60381 514 aa26.82■■□□□ 1.88
RNF38-208ENST00000488058 CHRNA1P02708 482 aa26.82■■□□□ 1.88
RNF38-208ENST00000488058 CA3P07451 260 aa26.82■■□□□ 1.88
RNF38-208ENST00000488058 PIK3AP1Q6ZUJ8 805 aa26.82■■□□□ 1.88
RNF38-208ENST00000488058 SLC5A5Q92911 643 aa26.82■■□□□ 1.88
RNF38-208ENST00000488058 RIT2Q99578 217 aa26.82■■□□□ 1.88
RNF38-208ENST00000488058 LIMCH1Q9UPQ0 1083 aa26.82■■□□□ 1.88
RNF38-208ENST00000488058 MICAL3Q7RTP6 2002 aa26.82■■□□□ 1.88
RNF38-208ENST00000488058 TLL1O43897 1013 aa26.81■■□□□ 1.88
RNF38-208ENST00000488058 FAM117BQ6P1L5 589 aa26.81■■□□□ 1.88
RNF38-208ENST00000488058 RPAINQ86UA6 219 aa26.81■■□□□ 1.88
RNF38-208ENST00000488058 BRMS1Q9HCU9 246 aa26.81■■□□□ 1.88
RNF38-208ENST00000488058 DISC1Q9NRI5 854 aa26.81■■□□□ 1.88
RNF38-208ENST00000488058 DDX25Q9UHL0 483 aaKnown RBP26.81■■□□□ 1.88
RNF38-208ENST00000488058 CDY2AQ9Y6F7 541 aa26.81■■□□□ 1.88
RNF38-208ENST00000488058 WDR81Q562E7 1941 aa26.8■■□□□ 1.88
RNF38-208ENST00000488058 CYP3A7-CYP3A51PA0A087WV96 503 aa26.8■■□□□ 1.88
RNF38-208ENST00000488058 GHRP10912 638 aa26.8■■□□□ 1.88
RNF38-208ENST00000488058 CYP3A7P24462 503 aa26.8■■□□□ 1.88
RNF38-208ENST00000488058 KRT2P35908 639 aa26.8■■□□□ 1.88
RNF38-208ENST00000488058 MRPS6P82932 125 aaKnown RBP26.8■■□□□ 1.88
RNF38-208ENST00000488058 TMEM62Q0P6H9 643 aa26.8■■□□□ 1.88
RNF38-208ENST00000488058 ST3GAL1Q11201 340 aa26.8■■□□□ 1.88
RNF38-208ENST00000488058 MTHFD1LQ6UB35 978 aa26.8■■□□□ 1.88
RNF38-208ENST00000488058 MOXD1Q6UVY6 613 aa26.8■■□□□ 1.88
RNF38-208ENST00000488058 LIN28BQ6ZN17 250 aaKnown RBP eCLIP26.8■■□□□ 1.88
RNF38-208ENST00000488058 NEK8Q86SG6 692 aa26.8■■□□□ 1.88
RNF38-208ENST00000488058 CCDC83Q8IWF9 413 aa26.8■■□□□ 1.88
RNF38-208ENST00000488058 GAS2L1Q99501 681 aaPredicted RBP26.8■■□□□ 1.88
RNF38-208ENST00000488058 UNC45AQ9H3U1 944 aa26.8■■□□□ 1.88
RNF38-208ENST00000488058 PCDHA2Q9Y5H9 948 aa26.8■■□□□ 1.88
RNF38-208ENST00000488058 MAFBQ9Y5Q3 323 aaPredicted RBP26.8■■□□□ 1.88
RNF38-208ENST00000488058 M0QZ92 97 aa26.79■■□□□ 1.88
RNF38-208ENST00000488058 AMHP03971 560 aa26.79■■□□□ 1.88
RNF38-208ENST00000488058 ATP4AP20648 1035 aa26.79■■□□□ 1.88
RNF38-208ENST00000488058 KLRC1P26715 233 aa26.79■■□□□ 1.88
RNF38-208ENST00000488058 MGAT3Q09327 533 aa26.79■■□□□ 1.88
RNF38-208ENST00000488058 TRIM29Q14134 588 aa26.79■■□□□ 1.88
RNF38-208ENST00000488058 MYOCDQ8IZQ8 938 aa26.79■■□□□ 1.88
RNF38-208ENST00000488058 MAFAQ8NHW3 353 aaPredicted RBP26.79■■□□□ 1.88
RNF38-208ENST00000488058 KIF2CQ99661 725 aa26.79■■□□□ 1.88
RNF38-208ENST00000488058 IFIH1Q9BYX4 1025 aaKnown RBP26.79■■□□□ 1.88
RNF38-208ENST00000488058 SLC37A4O43826 429 aa26.78■■□□□ 1.88
RNF38-208ENST00000488058 JAK3P52333 1124 aa26.78■■□□□ 1.88
RNF38-208ENST00000488058 NR5A1Q13285 461 aa26.78■■□□□ 1.88
RNF38-208ENST00000488058 ZNF484Q5JVG2 852 aa26.78■■□□□ 1.88
RNF38-208ENST00000488058 IER5Q5VY09 327 aa26.78■■□□□ 1.88
RNF38-208ENST00000488058 BBXQ8WY36 941 aaPredicted RBP26.78■■□□□ 1.88
RNF38-208ENST00000488058 MBOAT7Q96N66 472 aa26.78■■□□□ 1.88
RNF38-208ENST00000488058 CERS4Q9HA82 394 aa26.78■■□□□ 1.88
RNF38-208ENST00000488058 COL1A2P08123 1366 aa26.78■■□□□ 1.88
RNF38-208ENST00000488058 IGSF9BQ9UPX0 1349 aa26.77■■□□□ 1.88
RNF38-208ENST00000488058 CCNT1O60563 726 aaKnown RBP26.77■■□□□ 1.88
RNF38-208ENST00000488058 PSMD10O75832 226 aa26.77■■□□□ 1.88
RNF38-208ENST00000488058 RPLP2P05387 115 aaKnown RBP26.77■■□□□ 1.88
RNF38-208ENST00000488058 SFNP31947 248 aa26.77■■□□□ 1.88
RNF38-208ENST00000488058 MIER3Q7Z3K6 550 aa26.77■■□□□ 1.88
RNF38-208ENST00000488058 SLC17A8Q8NDX2 589 aa26.77■■□□□ 1.88
RNF38-208ENST00000488058 TRPV2Q9Y5S1 764 aa26.77■■□□□ 1.88
RNF38-208ENST00000488058 SMIM35A0A1B0GVV1 85 aa26.76■■□□□ 1.87
RNF38-208ENST00000488058 FAM205CA6NFA0 338 aa26.76■■□□□ 1.87
RNF38-208ENST00000488058 LPIN1Q14693 890 aa26.76■■□□□ 1.87
RNF38-208ENST00000488058 EARS2Q5JPH6 523 aaKnown RBP26.76■■□□□ 1.87
RNF38-208ENST00000488058 ETNPPLQ8TBG4 499 aa26.76■■□□□ 1.87
RNF38-208ENST00000488058 APBB2Q92870 758 aa26.76■■□□□ 1.87
RNF38-208ENST00000488058 FAM167AQ96KS9 214 aa26.76■■□□□ 1.87
RNF38-208ENST00000488058 UPF2Q9HAU5 1272 aaKnown RBP26.76■■□□□ 1.87
RNF38-208ENST00000488058 LOXHD1Q8IVV2 1947 aa26.75■■□□□ 1.87
RNF38-208ENST00000488058 MARCH6O60337 910 aa26.75■■□□□ 1.87
RNF38-208ENST00000488058 ARHGEF15O94989 841 aa26.75■■□□□ 1.87
RNF38-208ENST00000488058 GJB5O95377 273 aa26.75■■□□□ 1.87
RNF38-208ENST00000488058 GCFC2P16383 781 aaKnown RBP26.75■■□□□ 1.87
RNF38-208ENST00000488058 IGFBP4P22692 258 aa26.75■■□□□ 1.87
RNF38-208ENST00000488058 RBM25P49756 843 aaKnown RBP26.75■■□□□ 1.87
RNF38-208ENST00000488058 FBXO47Q5MNV8 452 aa26.75■■□□□ 1.87
RNF38-208ENST00000488058 KRT40Q6A162 431 aa26.75■■□□□ 1.87
RNF38-208ENST00000488058 ZSCAN31Q96LW9 406 aaPredicted RBP26.75■■□□□ 1.87
RNF38-208ENST00000488058 NAP1L4Q99733 375 aaKnown RBP26.75■■□□□ 1.87
RNF38-208ENST00000488058 EVPLQ92817 2033 aa26.75■■□□□ 1.87
RNF38-208ENST00000488058 LCHNA4D1U4 455 aa26.74■■□□□ 1.87
RNF38-208ENST00000488058 MMP1P03956 469 aa26.74■■□□□ 1.87
RNF38-208ENST00000488058 GUCY1B3Q02153 619 aa26.74■■□□□ 1.87
RNF38-208ENST00000488058 PRKCEQ02156 737 aa26.74■■□□□ 1.87
RNF38-208ENST00000488058 UGCGQ16739 394 aa26.74■■□□□ 1.87
RNF38-208ENST00000488058 DIS3L2Q8IYB7 885 aaKnown RBP26.74■■□□□ 1.87
RNF38-208ENST00000488058 CEP131Q9UPN4 1083 aa26.74■■□□□ 1.87
RNF38-208ENST00000488058 GINS2Q9Y248 185 aa26.74■■□□□ 1.87
RNF38-208ENST00000488058 MYO9BQ13459 2157 aa26.74■■□□□ 1.87
RNF38-208ENST00000488058 ZBTB42B2RXF5 422 aa26.73■■□□□ 1.87
RNF38-208ENST00000488058 ZNF862O60290 1169 aa26.73■■□□□ 1.87
RNF38-208ENST00000488058 UPP2O95045 317 aa26.73■■□□□ 1.87
RNF38-208ENST00000488058 OATP04181 439 aa26.73■■□□□ 1.87
RNF38-208ENST00000488058 TAP1Q03518 808 aa26.73■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms