RNA–Protein interactions for RNA: ENST00000487633.1

COL4A3-206, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-206ENST00000487633 KIAA1841Q6NSI8 718 aa6.88□□□□□ -1.31
COL4A3-206ENST00000487633 TMEM173Q86WV6 379 aaPredicted RBP6.88□□□□□ -1.31
COL4A3-206ENST00000487633 NPAS4Q8IUM7 802 aa6.88□□□□□ -1.31
COL4A3-206ENST00000487633 THNSL1Q8IYQ7 743 aa6.88□□□□□ -1.31
COL4A3-206ENST00000487633 ARHGAP45Q92619 1136 aa6.88□□□□□ -1.31
COL4A3-206ENST00000487633 FRAT1Q92837 279 aaPredicted RBP6.88□□□□□ -1.31
COL4A3-206ENST00000487633 RMDN3Q96TC7 470 aa6.88□□□□□ -1.31
COL4A3-206ENST00000487633 CDCA3Q99618 268 aaPredicted RBP6.88□□□□□ -1.31
COL4A3-206ENST00000487633 TMEM47Q9BQJ4 181 aa6.88□□□□□ -1.31
COL4A3-206ENST00000487633 RPP25Q9BUL9 199 aaKnown RBP6.88□□□□□ -1.31
COL4A3-206ENST00000487633 CDHR5Q9HBB8 845 aa6.88□□□□□ -1.31
COL4A3-206ENST00000487633 PXMP2Q9NR77 195 aa6.88□□□□□ -1.31
COL4A3-206ENST00000487633 RXFP3Q9NSD7 469 aa6.88□□□□□ -1.31
COL4A3-206ENST00000487633 DBR1Q9UK59 544 aaKnown RBP6.88□□□□□ -1.31
COL4A3-206ENST00000487633 SMG5Q9UPR3 1016 aaKnown RBP6.88□□□□□ -1.31
COL4A3-206ENST00000487633 SDK1Q7Z5N4 2213 aa6.88□□□□□ -1.31
COL4A3-206ENST00000487633 DSPP15924 2871 aaKnown RBP6.87□□□□□ -1.31
COL4A3-206ENST00000487633 BAZ2BQ9UIF8 2168 aaKnown RBP6.87□□□□□ -1.31
COL4A3-206ENST00000487633 NT5C1B-RDH14C9J2C7 533 aa6.87□□□□□ -1.31
COL4A3-206ENST00000487633 SLC30A4O14863 429 aa6.87□□□□□ -1.31
COL4A3-206ENST00000487633 GPAA1O43292 621 aa6.87□□□□□ -1.31
COL4A3-206ENST00000487633 KINO60870 393 aaKnown RBP6.87□□□□□ -1.31
COL4A3-206ENST00000487633 LILRB5O75023 590 aa6.87□□□□□ -1.31
COL4A3-206ENST00000487633 PROS1P07225 676 aa6.87□□□□□ -1.31
COL4A3-206ENST00000487633 PDHBP11177 359 aa6.87□□□□□ -1.31
COL4A3-206ENST00000487633 MYCLP12524 364 aaPredicted RBP6.87□□□□□ -1.31
COL4A3-206ENST00000487633 HOXB8P17481 243 aaPredicted RBP6.87□□□□□ -1.31
COL4A3-206ENST00000487633 TDO2P48775 406 aa6.87□□□□□ -1.31
COL4A3-206ENST00000487633 PPARAQ07869 468 aa6.87□□□□□ -1.31
COL4A3-206ENST00000487633 TBC1D8BQ0IIM8 1120 aa6.87□□□□□ -1.31
COL4A3-206ENST00000487633 SPOUT1Q5T280 376 aaKnown RBP6.87□□□□□ -1.31
COL4A3-206ENST00000487633 UTP14CQ5TAP6 766 aaKnown RBP6.87□□□□□ -1.31
COL4A3-206ENST00000487633 TSHZ3Q63HK5 1081 aa6.87□□□□□ -1.31
COL4A3-206ENST00000487633 LRSAM1Q6UWE0 723 aa6.87□□□□□ -1.31
COL4A3-206ENST00000487633 MRPS27Q92552 414 aaKnown RBP6.87□□□□□ -1.31
COL4A3-206ENST00000487633 ENTPD7Q9NQZ7 604 aa6.87□□□□□ -1.31
COL4A3-206ENST00000487633 ANGPTL2Q9UKU9 493 aa6.87□□□□□ -1.31
COL4A3-206ENST00000487633 PADI3Q9ULW8 664 aa6.87□□□□□ -1.31
COL4A3-206ENST00000487633 LAMA1P25391 3075 aa6.86□□□□□ -1.31
COL4A3-206ENST00000487633 SOBPA7XYQ1 873 aa6.86□□□□□ -1.31
COL4A3-206ENST00000487633 PRR5-ARHGAP8B1AHC4 643 aa6.86□□□□□ -1.31
COL4A3-206ENST00000487633 CAND2O75155 1236 aa6.86□□□□□ -1.31
COL4A3-206ENST00000487633 SCG2P13521 617 aa6.86□□□□□ -1.31
COL4A3-206ENST00000487633 ATP5JP18859 108 aa6.86□□□□□ -1.31
COL4A3-206ENST00000487633 CD72P21854 359 aa6.86□□□□□ -1.31
COL4A3-206ENST00000487633 PDE4AP27815 886 aa6.86□□□□□ -1.31
COL4A3-206ENST00000487633 HOXA13P31271 388 aaPredicted RBP6.86□□□□□ -1.31
COL4A3-206ENST00000487633 ARHGAP8P85298 464 aa6.86□□□□□ -1.31
COL4A3-206ENST00000487633 SP4Q02446 784 aa6.86□□□□□ -1.31
COL4A3-206ENST00000487633 LMNB2Q03252 620 aa6.86□□□□□ -1.31
COL4A3-206ENST00000487633 CSTF1Q05048 431 aaKnown RBP6.86□□□□□ -1.31
COL4A3-206ENST00000487633 UBE3AQ05086 875 aa6.86□□□□□ -1.31
COL4A3-206ENST00000487633 ITIH3Q06033 890 aa6.86□□□□□ -1.31
COL4A3-206ENST00000487633 WTAPQ15007 396 aa6.86□□□□□ -1.31
COL4A3-206ENST00000487633 SOWAHCQ53LP3 525 aaPredicted RBP6.86□□□□□ -1.31
COL4A3-206ENST00000487633 ARHGEF16Q5VV41 709 aa6.86□□□□□ -1.31
COL4A3-206ENST00000487633 CES5AQ6NT32 575 aa6.86□□□□□ -1.31
COL4A3-206ENST00000487633 TSHZ1Q6ZSZ6 1077 aa6.86□□□□□ -1.31
COL4A3-206ENST00000487633 SIRT2Q8IXJ6 389 aa6.86□□□□□ -1.31
COL4A3-206ENST00000487633 SLC44A3Q8N4M1 653 aa6.86□□□□□ -1.31
COL4A3-206ENST00000487633 ZBTB44Q8NCP5 570 aa6.86□□□□□ -1.31
COL4A3-206ENST00000487633 NSUN6Q8TEA1 469 aaKnown RBP6.86□□□□□ -1.31
COL4A3-206ENST00000487633 SLC22A17Q8WUG5 538 aa6.86□□□□□ -1.31
COL4A3-206ENST00000487633 BCL7CQ8WUZ0 217 aaPredicted RBP6.86□□□□□ -1.31
COL4A3-206ENST00000487633 DCAF4Q8WV16 495 aa6.86□□□□□ -1.31
COL4A3-206ENST00000487633 TRAPPC12Q8WVT3 735 aa6.86□□□□□ -1.31
COL4A3-206ENST00000487633 TMEM40Q8WWA1 233 aa6.86□□□□□ -1.31
COL4A3-206ENST00000487633 NELL1Q92832 810 aa6.86□□□□□ -1.31
COL4A3-206ENST00000487633 CASP10Q92851 521 aa6.86□□□□□ -1.31
COL4A3-206ENST00000487633 MAP4K1Q92918 833 aa6.86□□□□□ -1.31
COL4A3-206ENST00000487633 DDRGK1Q96HY6 314 aa6.86□□□□□ -1.31
COL4A3-206ENST00000487633 NECTIN4Q96NY8 510 aa6.86□□□□□ -1.31
COL4A3-206ENST00000487633 MYADMQ96S97 322 aa6.86□□□□□ -1.31
COL4A3-206ENST00000487633 GPR20Q99678 358 aa6.86□□□□□ -1.31
COL4A3-206ENST00000487633 PDCD2LQ9BRP1 358 aa6.86□□□□□ -1.31
COL4A3-206ENST00000487633 RNF216Q9NWF9 866 aaPredicted RBP6.86□□□□□ -1.31
COL4A3-206ENST00000487633 WNT16Q9UBV4 365 aa6.86□□□□□ -1.31
COL4A3-206ENST00000487633 SIT1Q9Y3P8 196 aa6.86□□□□□ -1.31
COL4A3-206ENST00000487633 GREB1Q4ZG55 1949 aa6.86□□□□□ -1.31
COL4A3-206ENST00000487633 WDR19Q8NEZ3 1342 aa6.85□□□□□ -1.31
COL4A3-206ENST00000487633 NOTCH4Q99466 2003 aa6.85□□□□□ -1.31
COL4A3-206ENST00000487633 TSPY2A6NKD2 308 aa6.85□□□□□ -1.31
COL4A3-206ENST00000487633 SHISA7A6NL88 538 aa6.85□□□□□ -1.31
COL4A3-206ENST00000487633 SRRM3A6NNA2 597 aaPredicted RBP6.85□□□□□ -1.31
COL4A3-206ENST00000487633 TM4SF5O14894 197 aa6.85□□□□□ -1.31
COL4A3-206ENST00000487633 SMARCA5O60264 1052 aaPredicted RBP6.85□□□□□ -1.31
COL4A3-206ENST00000487633 PPP1R11O60927 126 aaPredicted RBP6.85□□□□□ -1.31
COL4A3-206ENST00000487633 EIF3JO75822 258 aaKnown RBP6.85□□□□□ -1.31
COL4A3-206ENST00000487633 APPP05067 770 aa6.85□□□□□ -1.31
COL4A3-206ENST00000487633 MARK3P27448 753 aa6.85□□□□□ -1.31
COL4A3-206ENST00000487633 MTHFRP42898 656 aa6.85□□□□□ -1.31
COL4A3-206ENST00000487633 SHC2P98077 582 aa6.85□□□□□ -1.31
COL4A3-206ENST00000487633 PLCB3Q01970 1234 aa6.85□□□□□ -1.31
COL4A3-206ENST00000487633 ZNF543Q08ER8 600 aa6.85□□□□□ -1.31
COL4A3-206ENST00000487633 DMWDQ09019 674 aa6.85□□□□□ -1.31
COL4A3-206ENST00000487633 PGM5Q15124 567 aa6.85□□□□□ -1.31
COL4A3-206ENST00000487633 GIMAP6Q6P9H5 292 aa6.85□□□□□ -1.31
COL4A3-206ENST00000487633 ZC3H14Q6PJT7 736 aaKnown RBP6.85□□□□□ -1.31
COL4A3-206ENST00000487633 CYFIP1Q7L576 1253 aa6.85□□□□□ -1.31
COL4A3-206ENST00000487633 TMC7Q7Z402 723 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms