RNA–Protein interactions for RNA: ENST00000487211.5

RTFDC1-209, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-209ENST00000487211 CTSKP43235 329 aa7.73□□□□□ -1.17
RTFDC1-209ENST00000487211 ST5P78524 1137 aa7.73□□□□□ -1.17
RTFDC1-209ENST00000487211 GCKRQ14397 625 aa7.73□□□□□ -1.17
RTFDC1-209ENST00000487211 TCEA2Q15560 299 aa7.73□□□□□ -1.17
RTFDC1-209ENST00000487211 SLC4A10Q6U841 1118 aa7.73□□□□□ -1.17
RTFDC1-209ENST00000487211 LINS1Q8NG48 757 aa7.73□□□□□ -1.17
RTFDC1-209ENST00000487211 NETO1Q8TDF5 533 aa7.73□□□□□ -1.17
RTFDC1-209ENST00000487211 UBE2FQ969M7 185 aa7.73□□□□□ -1.17
RTFDC1-209ENST00000487211 TCTN2Q96GX1 697 aa7.73□□□□□ -1.17
RTFDC1-209ENST00000487211 EXOC2Q96KP1 924 aa7.73□□□□□ -1.17
RTFDC1-209ENST00000487211 IER2Q9BTL4 223 aa7.73□□□□□ -1.17
RTFDC1-209ENST00000487211 DHRS4Q9BTZ2 278 aa7.73□□□□□ -1.17
RTFDC1-209ENST00000487211 CWC25Q9NXE8 425 aaPredicted RBP7.73□□□□□ -1.17
RTFDC1-209ENST00000487211 PXDNLA1KZ92 1463 aa7.73□□□□□ -1.17
RTFDC1-209ENST00000487211 PTPRCP08575 1304 aa7.73□□□□□ -1.17
RTFDC1-209ENST00000487211 SH3TC1Q8TE82 1336 aa7.73□□□□□ -1.17
RTFDC1-209ENST00000487211 SCN7AQ01118 1682 aa7.73□□□□□ -1.17
RTFDC1-209ENST00000487211 BCORQ6W2J9 1755 aa7.72□□□□□ -1.17
RTFDC1-209ENST00000487211 ANKRD62A6NC57 917 aa7.72□□□□□ -1.17
RTFDC1-209ENST00000487211 PRR19A6NJB7 356 aa7.72□□□□□ -1.17
RTFDC1-209ENST00000487211 IRS4O14654 1257 aaPredicted RBP7.72□□□□□ -1.17
RTFDC1-209ENST00000487211 PCCAP05165 728 aaPredicted RBP7.72□□□□□ -1.17
RTFDC1-209ENST00000487211 CD3EP07766 207 aa7.72□□□□□ -1.17
RTFDC1-209ENST00000487211 FGFR1P11362 822 aa7.72□□□□□ -1.17
RTFDC1-209ENST00000487211 PABPC1P11940 636 aaKnown RBP7.72□□□□□ -1.17
RTFDC1-209ENST00000487211 TPP2P29144 1249 aaPredicted RBP7.72□□□□□ -1.17
RTFDC1-209ENST00000487211 CLCN7P51798 805 aa7.72□□□□□ -1.17
RTFDC1-209ENST00000487211 POU4F1Q01851 419 aa7.72□□□□□ -1.17
RTFDC1-209ENST00000487211 NEXNQ0ZGT2 675 aa7.72□□□□□ -1.17
RTFDC1-209ENST00000487211 IFI16Q16666 785 aaKnown RBP7.72□□□□□ -1.17
RTFDC1-209ENST00000487211 CRY2Q49AN0 593 aa7.72□□□□□ -1.17
RTFDC1-209ENST00000487211 NSMFQ6X4W1 530 aa7.72□□□□□ -1.17
RTFDC1-209ENST00000487211 TSPYL5Q86VY4 417 aaPredicted RBP7.72□□□□□ -1.17
RTFDC1-209ENST00000487211 SCUBE1Q8IWY4 988 aa7.72□□□□□ -1.17
RTFDC1-209ENST00000487211 ARHGAP45Q92619 1136 aa7.72□□□□□ -1.17
RTFDC1-209ENST00000487211 FRAT1Q92837 279 aaPredicted RBP7.72□□□□□ -1.17
RTFDC1-209ENST00000487211 ZNF622Q969S3 477 aaKnown RBP eCLIP7.72□□□□□ -1.179e-9■□□□□ 9.6
RTFDC1-209ENST00000487211 SLKQ9H2G2 1235 aaPredicted RBP7.72□□□□□ -1.17
RTFDC1-209ENST00000487211 ZC3H7BQ9UGR2 993 aaKnown RBP7.72□□□□□ -1.17
RTFDC1-209ENST00000487211 MRPS23Q9Y3D9 190 aaKnown RBP7.72□□□□□ -1.17
RTFDC1-209ENST00000487211 AFDNP55196 1824 aaKnown RBP7.72□□□□□ -1.17
RTFDC1-209ENST00000487211 NRXN2Q9P2S2 1712 aa7.72□□□□□ -1.17
RTFDC1-209ENST00000487211 IBTKQ9P2D0 1353 aaPredicted RBP7.71□□□□□ -1.17
RTFDC1-209ENST00000487211 CCDC163A0A0D9SF12 145 aa7.71□□□□□ -1.18
RTFDC1-209ENST00000487211 PPP1R12AO14974 1030 aaPredicted RBP7.71□□□□□ -1.18
RTFDC1-209ENST00000487211 CAPNS1P04632 268 aa7.71□□□□□ -1.18
RTFDC1-209ENST00000487211 SNRPB2P08579 225 aaKnown RBP7.71□□□□□ -1.18
RTFDC1-209ENST00000487211 FOSL1P15407 271 aa7.71□□□□□ -1.18
RTFDC1-209ENST00000487211 HOXA10P31260 410 aaPredicted RBP7.71□□□□□ -1.18
RTFDC1-209ENST00000487211 KCNJ6P48051 423 aa7.71□□□□□ -1.18
RTFDC1-209ENST00000487211 SF3B3Q15393 1217 aaKnown RBP7.71□□□□□ -1.18
RTFDC1-209ENST00000487211 SF1Q15637 639 aaKnown RBP7.71□□□□□ -1.18
RTFDC1-209ENST00000487211 TKFCQ3LXA3 575 aa7.71□□□□□ -1.18
RTFDC1-209ENST00000487211 THAP5Q7Z6K1 395 aa7.71□□□□□ -1.18
RTFDC1-209ENST00000487211 KIAA0907Q7Z7F0 614 aaPredicted RBP7.71□□□□□ -1.18
RTFDC1-209ENST00000487211 OSBP2Q969R2 916 aa7.71□□□□□ -1.18
RTFDC1-209ENST00000487211 MASTLQ96GX5 879 aa7.71□□□□□ -1.18
RTFDC1-209ENST00000487211 FEZ1Q99689 392 aa7.71□□□□□ -1.18
RTFDC1-209ENST00000487211 NKX2-4Q9H2Z4 354 aa7.71□□□□□ -1.18
RTFDC1-209ENST00000487211 TMEM265A0A087WTH1 108 aa7.7□□□□□ -1.18
RTFDC1-209ENST00000487211 SSU72P8A0A1W2PR75 194 aa7.7□□□□□ -1.18
RTFDC1-209ENST00000487211 PDE8AO60658 829 aa7.7□□□□□ -1.18
RTFDC1-209ENST00000487211 ALDH1L1O75891 902 aa7.7□□□□□ -1.18
RTFDC1-209ENST00000487211 TGFB1P01137 390 aa7.7□□□□□ -1.18
RTFDC1-209ENST00000487211 FURINP09958 794 aa7.7□□□□□ -1.18
RTFDC1-209ENST00000487211 NBPF7P0C2Y1 421 aaPredicted RBP7.7□□□□□ -1.18
RTFDC1-209ENST00000487211 TRIM27P14373 513 aa7.7□□□□□ -1.18
RTFDC1-209ENST00000487211 NPR1P16066 1061 aa7.7□□□□□ -1.18
RTFDC1-209ENST00000487211 HOXC12P31275 282 aa7.7□□□□□ -1.18
RTFDC1-209ENST00000487211 NOP2P46087 812 aaKnown RBP7.7□□□□□ -1.18
RTFDC1-209ENST00000487211 DALRD3Q5D0E6 543 aaKnown RBP7.7□□□□□ -1.18
RTFDC1-209ENST00000487211 EPHA10Q5JZY3 1008 aa7.7□□□□□ -1.18
RTFDC1-209ENST00000487211 STYK1Q6J9G0 422 aa7.7□□□□□ -1.18
RTFDC1-209ENST00000487211 OLFM4Q6UX06 510 aa7.7□□□□□ -1.18
RTFDC1-209ENST00000487211 UBE3BQ7Z3V4 1068 aa7.7□□□□□ -1.18
RTFDC1-209ENST00000487211 SYNPOQ8N3V7 929 aa7.7□□□□□ -1.18
RTFDC1-209ENST00000487211 TTLL6Q8N841 843 aa7.7□□□□□ -1.18
RTFDC1-209ENST00000487211 KISS1RQ969F8 398 aaPredicted RBP7.7□□□□□ -1.18
RTFDC1-209ENST00000487211 KAZALD1Q96I82 304 aa7.7□□□□□ -1.18
RTFDC1-209ENST00000487211 MCMBPQ9BTE3 642 aa7.7□□□□□ -1.18
RTFDC1-209ENST00000487211 API5Q9BZZ5 524 aaKnown RBP7.7□□□□□ -1.18
RTFDC1-209ENST00000487211 USP44Q9H0E7 712 aa7.7□□□□□ -1.18
RTFDC1-209ENST00000487211 CYP26B1Q9NR63 512 aa7.7□□□□□ -1.18
RTFDC1-209ENST00000487211 SEMA3GQ9NS98 782 aa7.7□□□□□ -1.18
RTFDC1-209ENST00000487211 DUSP13Q9UII6 198 aa7.7□□□□□ -1.18
RTFDC1-209ENST00000487211 RCAN3Q9UKA8 241 aa7.7□□□□□ -1.18
RTFDC1-209ENST00000487211 SNX11Q9Y5W9 270 aa7.7□□□□□ -1.18
RTFDC1-209ENST00000487211 RNF123Q5XPI4 1314 aa7.7□□□□□ -1.18
RTFDC1-209ENST00000487211 PKD1L2Q7Z442 2459 aa7.69□□□□□ -1.18
RTFDC1-209ENST00000487211 STXBP3O00186 592 aa7.69□□□□□ -1.18
RTFDC1-209ENST00000487211 GRM8O00222 908 aa7.69□□□□□ -1.18
RTFDC1-209ENST00000487211 IPO8O15397 1037 aaKnown RBP7.69□□□□□ -1.18
RTFDC1-209ENST00000487211 PLIN1O60240 522 aa7.69□□□□□ -1.18
RTFDC1-209ENST00000487211 DLX3O60479 287 aa7.69□□□□□ -1.18
RTFDC1-209ENST00000487211 IGHA1P01876 353 aa7.69□□□□□ -1.18
RTFDC1-209ENST00000487211 CSF1RP07333 972 aa7.69□□□□□ -1.18
RTFDC1-209ENST00000487211 SYPP08247 313 aa7.69□□□□□ -1.18
RTFDC1-209ENST00000487211 VAV1P15498 845 aa7.69□□□□□ -1.18
RTFDC1-209ENST00000487211 ALDH1B1P30837 517 aa7.69□□□□□ -1.18
RTFDC1-209ENST00000487211 BMP8BP34820 402 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms