RNA–Protein interactions for RNA: ENST00000487147.5

COL6A4P1-202, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

BASIC

Gene COL6A4P1, Length 4,317 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-202ENST00000487147 DYNLL2Q96FJ2 89 aa8.3□□□□□ -1.08
COL6A4P1-202ENST00000487147 TRIM51Q9BSJ1 452 aa8.3□□□□□ -1.08
COL6A4P1-202ENST00000487147 CELF4Q9BZC1 486 aaKnown RBP8.3□□□□□ -1.08
COL6A4P1-202ENST00000487147 ETNK1Q9HBU6 452 aa8.3□□□□□ -1.08
COL6A4P1-202ENST00000487147 H0Y3Z8 333 aa8.3□□□□□ -1.08
COL6A4P1-202ENST00000487147 PODXLO00592 558 aa8.3□□□□□ -1.08
COL6A4P1-202ENST00000487147 ATP2A2P16615 1042 aaKnown RBP8.3□□□□□ -1.08
COL6A4P1-202ENST00000487147 POLD1P28340 1107 aa8.3□□□□□ -1.08
COL6A4P1-202ENST00000487147 CYP2J2P51589 502 aa8.3□□□□□ -1.08
COL6A4P1-202ENST00000487147 USP11P51784 963 aa8.3□□□□□ -1.08
COL6A4P1-202ENST00000487147 BARHL2Q9NY43 387 aa8.3□□□□□ -1.08
COL6A4P1-202ENST00000487147 DIP2BQ9P265 1576 aa8.3□□□□□ -1.08
COL6A4P1-202ENST00000487147 A0A087X0T9 212 aa8.3□□□□□ -1.08
COL6A4P1-202ENST00000487147 SKAP2O75563 359 aaPredicted RBP8.3□□□□□ -1.08
COL6A4P1-202ENST00000487147 ANP32DO95626 131 aa8.3□□□□□ -1.08
COL6A4P1-202ENST00000487147 HLA-DOAP06340 250 aa8.3□□□□□ -1.08
COL6A4P1-202ENST00000487147 FAM228BP0C875 321 aa8.3□□□□□ -1.08
COL6A4P1-202ENST00000487147 TROVE2P10155 538 aaKnown RBP eCLIP8.3□□□□□ -1.08
COL6A4P1-202ENST00000487147 POLE2P56282 527 aa8.3□□□□□ -1.08
COL6A4P1-202ENST00000487147 COASYQ13057 564 aa8.3□□□□□ -1.08
COL6A4P1-202ENST00000487147 PABPC4Q13310 644 aaKnown RBP eCLIP8.3□□□□□ -1.08
COL6A4P1-202ENST00000487147 TNIP1Q15025 636 aa8.3□□□□□ -1.08
COL6A4P1-202ENST00000487147 RASIP1Q5U651 963 aa8.3□□□□□ -1.08
COL6A4P1-202ENST00000487147 WDR66Q8TBY9 1149 aa8.3□□□□□ -1.08
COL6A4P1-202ENST00000487147 LRRC8CQ8TDW0 803 aa8.3□□□□□ -1.08
COL6A4P1-202ENST00000487147 RAD54LQ92698 747 aa8.3□□□□□ -1.08
COL6A4P1-202ENST00000487147 ACSBG1Q96GR2 724 aa8.3□□□□□ -1.08
COL6A4P1-202ENST00000487147 GDF3Q9NR23 364 aa8.3□□□□□ -1.08
COL6A4P1-202ENST00000487147 TYW1Q9NV66 732 aaKnown RBP8.3□□□□□ -1.08
COL6A4P1-202ENST00000487147 CLIC2O15247 247 aa8.3□□□□□ -1.08
COL6A4P1-202ENST00000487147 ECEL1O95672 775 aa8.3□□□□□ -1.08
COL6A4P1-202ENST00000487147 PDHA1P08559 390 aa8.3□□□□□ -1.08
COL6A4P1-202ENST00000487147 PLA2G4BP0C869 781 aa8.3□□□□□ -1.08
COL6A4P1-202ENST00000487147 STRN3Q13033 797 aa8.3□□□□□ -1.08
COL6A4P1-202ENST00000487147 SEC23AQ15436 765 aa8.3□□□□□ -1.08
COL6A4P1-202ENST00000487147 ZNF449Q6P9G9 518 aa8.3□□□□□ -1.08
COL6A4P1-202ENST00000487147 FAM47EQ6ZV65 393 aa8.3□□□□□ -1.08
COL6A4P1-202ENST00000487147 ARHGAP24Q8N264 748 aa8.3□□□□□ -1.08
COL6A4P1-202ENST00000487147 ANKRD35Q8N283 1001 aa8.3□□□□□ -1.08
COL6A4P1-202ENST00000487147 COA7Q96BR5 231 aa8.3□□□□□ -1.08
COL6A4P1-202ENST00000487147 DUSP9Q99956 384 aaKnown RBP8.3□□□□□ -1.08
COL6A4P1-202ENST00000487147 PITPNM3Q9BZ71 974 aa8.3□□□□□ -1.08
COL6A4P1-202ENST00000487147 KDM4CQ9H3R0 1056 aa8.3□□□□□ -1.08
COL6A4P1-202ENST00000487147 DCP1AQ9NPI6 582 aaPredicted RBP8.3□□□□□ -1.08
COL6A4P1-202ENST00000487147 HOMER2Q9NSB8 354 aa8.3□□□□□ -1.08
COL6A4P1-202ENST00000487147 LEMD3Q9Y2U8 911 aa8.3□□□□□ -1.08
COL6A4P1-202ENST00000487147 DIP2AQ14689 1571 aa8.3□□□□□ -1.08
COL6A4P1-202ENST00000487147 MYMKA6NI61 221 aa8.29□□□□□ -1.08
COL6A4P1-202ENST00000487147 LRRN2O75325 713 aa8.29□□□□□ -1.08
COL6A4P1-202ENST00000487147 CIB2O75838 187 aa8.29□□□□□ -1.08
COL6A4P1-202ENST00000487147 CCND1P24385 295 aa8.29□□□□□ -1.08
COL6A4P1-202ENST00000487147 UAP1Q16222 522 aaPredicted RBP8.29□□□□□ -1.08
COL6A4P1-202ENST00000487147 PPP1R21Q6ZMI0 780 aa8.29□□□□□ -1.08
COL6A4P1-202ENST00000487147 ZNF804AQ7Z570 1209 aa8.29□□□□□ -1.08
COL6A4P1-202ENST00000487147 IQCKQ8N0W5 287 aa8.29□□□□□ -1.08
COL6A4P1-202ENST00000487147 PPP1R14CQ8TAE6 165 aa8.29□□□□□ -1.08
COL6A4P1-202ENST00000487147 MAIP1Q8WWC4 291 aa8.29□□□□□ -1.08
COL6A4P1-202ENST00000487147 SETDB2Q96T68 719 aa8.29□□□□□ -1.08
COL6A4P1-202ENST00000487147 SPZ1Q9BXG8 430 aa8.29□□□□□ -1.08
COL6A4P1-202ENST00000487147 GGA2Q9UJY4 613 aa8.29□□□□□ -1.08
COL6A4P1-202ENST00000487147 DIS3Q9Y2L1 958 aaKnown RBP8.29□□□□□ -1.08
COL6A4P1-202ENST00000487147 C3P01024 1663 aa8.29□□□□□ -1.08
COL6A4P1-202ENST00000487147 AGLP35573 1532 aa8.29□□□□□ -1.08
COL6A4P1-202ENST00000487147 FAM187AA6NFU0 413 aa8.29□□□□□ -1.08
COL6A4P1-202ENST00000487147 TCP11X1B4DZS4 312 aa8.29□□□□□ -1.08
COL6A4P1-202ENST00000487147 C6orf229H3BNL8 230 aa8.29□□□□□ -1.08
COL6A4P1-202ENST00000487147 TRAPPC3O43617 180 aa8.29□□□□□ -1.08
COL6A4P1-202ENST00000487147 ATP6V1G2O95670 118 aa8.29□□□□□ -1.08
COL6A4P1-202ENST00000487147 AGTP01019 485 aa8.29□□□□□ -1.08
COL6A4P1-202ENST00000487147 ATF2P15336 505 aa8.29□□□□□ -1.08
COL6A4P1-202ENST00000487147 FECHP22830 423 aa8.29□□□□□ -1.08
COL6A4P1-202ENST00000487147 MECOMQ03112 1051 aa8.29□□□□□ -1.08
COL6A4P1-202ENST00000487147 ITGB3BPQ13352 177 aaPredicted RBP8.29□□□□□ -1.08
COL6A4P1-202ENST00000487147 LRRC34Q8IZ02 419 aa8.29□□□□□ -1.08
COL6A4P1-202ENST00000487147 KIF2BQ8N4N8 673 aa8.29□□□□□ -1.08
COL6A4P1-202ENST00000487147 DDX23Q9BUQ8 820 aaKnown RBP8.29□□□□□ -1.08
COL6A4P1-202ENST00000487147 GLT8D2Q9H1C3 349 aa8.29□□□□□ -1.08
COL6A4P1-202ENST00000487147 PSTPIP2Q9H939 334 aa8.29□□□□□ -1.08
COL6A4P1-202ENST00000487147 VPS37BQ9H9H4 285 aa8.29□□□□□ -1.08
COL6A4P1-202ENST00000487147 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.29□□□□□ -1.08
COL6A4P1-202ENST00000487147 DNAJC17Q9NVM6 304 aaKnown RBP8.29□□□□□ -1.08
COL6A4P1-202ENST00000487147 SCOCQ9UIL1 159 aa8.29□□□□□ -1.08
COL6A4P1-202ENST00000487147 USP15Q9Y4E8 981 aaPredicted RBP8.29□□□□□ -1.08
COL6A4P1-202ENST00000487147 XRN1Q8IZH2 1706 aaKnown RBP8.29□□□□□ -1.08
COL6A4P1-202ENST00000487147 CHMP2AO43633 222 aa8.29□□□□□ -1.08
COL6A4P1-202ENST00000487147 ORC4O43929 436 aa8.29□□□□□ -1.08
COL6A4P1-202ENST00000487147 TNFRSF8P28908 595 aa8.29□□□□□ -1.08
COL6A4P1-202ENST00000487147 ERVK-9P63128 1117 aa8.29□□□□□ -1.08
COL6A4P1-202ENST00000487147 ZNF844Q08AG5 666 aa8.29□□□□□ -1.08
COL6A4P1-202ENST00000487147 PHLDB3Q6NSJ2 640 aa8.29□□□□□ -1.08
COL6A4P1-202ENST00000487147 IRF2BP1Q8IU81 584 aa8.29□□□□□ -1.08
COL6A4P1-202ENST00000487147 METTL13Q8N6R0 699 aa8.29□□□□□ -1.08
COL6A4P1-202ENST00000487147 CCDC87Q9NVE4 849 aa8.29□□□□□ -1.08
COL6A4P1-202ENST00000487147 FAM208AQ9UK61 1670 aaKnown RBP8.28□□□□□ -1.08
COL6A4P1-202ENST00000487147 MON2Q7Z3U7 1717 aa8.28□□□□□ -1.08
COL6A4P1-202ENST00000487147 KIF3CO14782 793 aa8.28□□□□□ -1.08
COL6A4P1-202ENST00000487147 FOXP2O15409 715 aa8.28□□□□□ -1.08
COL6A4P1-202ENST00000487147 SKIP12755 728 aa8.28□□□□□ -1.08
COL6A4P1-202ENST00000487147 BRAFP15056 766 aa8.28□□□□□ -1.08
COL6A4P1-202ENST00000487147 IL6STP40189 918 aaPredicted RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms