RNA–Protein interactions for RNA: ENST00000486704.1

HDAC8-218, Transcript of histone deacetylase 8, humanhuman

TSL 2

Gene HDAC8, Length 330 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-218ENST00000486704 WDR5P61964 334 aaKnown RBP18.04■□□□□ 0.48
HDAC8-218ENST00000486704 MKRN4PQ13434 485 aaPredicted RBP18.04■□□□□ 0.48
HDAC8-218ENST00000486704 RABEP1Q15276 862 aa18.04■□□□□ 0.48
HDAC8-218ENST00000486704 PLEKHG4Q58EX7 1191 aa18.04■□□□□ 0.48
HDAC8-218ENST00000486704 PPP4R3AQ6IN85 833 aa18.04■□□□□ 0.48
HDAC8-218ENST00000486704 SWSAP1Q6NVH7 229 aa18.04■□□□□ 0.48
HDAC8-218ENST00000486704 PDXDC2PQ6P474 469 aa18.04■□□□□ 0.48
HDAC8-218ENST00000486704 RDM1Q8NG50 284 aa18.04■□□□□ 0.48
HDAC8-218ENST00000486704 UIMC1Q96RL1 719 aa18.04■□□□□ 0.48
HDAC8-218ENST00000486704 TEKT3Q9BXF9 490 aa18.04■□□□□ 0.48
HDAC8-218ENST00000486704 DDX25Q9UHL0 483 aaKnown RBP18.04■□□□□ 0.48
HDAC8-218ENST00000486704 CDH23Q9H251 3354 aa18.04■□□□□ 0.48
HDAC8-218ENST00000486704 ATP4AP20648 1035 aa18.03■□□□□ 0.48
HDAC8-218ENST00000486704 KCNJ6P48051 423 aa18.03■□□□□ 0.48
HDAC8-218ENST00000486704 JAK3P52333 1124 aa18.03■□□□□ 0.48
HDAC8-218ENST00000486704 IGBP1P78318 339 aa18.03■□□□□ 0.48
HDAC8-218ENST00000486704 MGAT3Q09327 533 aa18.03■□□□□ 0.48
HDAC8-218ENST00000486704 IKBKEQ14164 716 aa18.03■□□□□ 0.48
HDAC8-218ENST00000486704 TCTN1Q2MV58 587 aa18.03■□□□□ 0.48
HDAC8-218ENST00000486704 B3GNT9Q6UX72 402 aa18.03■□□□□ 0.48
HDAC8-218ENST00000486704 PIK3AP1Q6ZUJ8 805 aa18.03■□□□□ 0.48
HDAC8-218ENST00000486704 CCDC83Q8IWF9 413 aa18.03■□□□□ 0.48
HDAC8-218ENST00000486704 BBXQ8WY36 941 aaPredicted RBP18.03■□□□□ 0.48
HDAC8-218ENST00000486704 FAM161BQ96MY7 647 aa18.03■□□□□ 0.48
HDAC8-218ENST00000486704 ZNF576Q9H609 170 aa18.03■□□□□ 0.48
HDAC8-218ENST00000486704 DISC1Q9NRI5 854 aa18.03■□□□□ 0.48
HDAC8-218ENST00000486704 YBX2Q9Y2T7 364 aaKnown RBP18.03■□□□□ 0.48
HDAC8-218ENST00000486704 PCDHA2Q9Y5H9 948 aa18.03■□□□□ 0.48
HDAC8-218ENST00000486704 CHD7Q9P2D1 2997 aa18.03■□□□□ 0.48
HDAC8-218ENST00000486704 COL4A6Q14031 1691 aa18.03■□□□□ 0.48
HDAC8-218ENST00000486704 SLC37A4O43826 429 aa18.02■□□□□ 0.48
HDAC8-218ENST00000486704 CHRNA1P02708 482 aa18.02■□□□□ 0.48
HDAC8-218ENST00000486704 NR5A1Q13285 461 aa18.02■□□□□ 0.48
HDAC8-218ENST00000486704 TRIM29Q14134 588 aa18.02■□□□□ 0.48
HDAC8-218ENST00000486704 LETM2Q2VYF4 491 aa18.02■□□□□ 0.48
HDAC8-218ENST00000486704 ZNF484Q5JVG2 852 aa18.02■□□□□ 0.48
HDAC8-218ENST00000486704 HERC6Q8IVU3 1022 aa18.02■□□□□ 0.48
HDAC8-218ENST00000486704 TRAPPC12Q8WVT3 735 aa18.02■□□□□ 0.48
HDAC8-218ENST00000486704 DNAJB3Q8WWF6 145 aa18.02■□□□□ 0.48
HDAC8-218ENST00000486704 APBB2Q92870 758 aa18.02■□□□□ 0.48
HDAC8-218ENST00000486704 FAM167AQ96KS9 214 aa18.02■□□□□ 0.48
HDAC8-218ENST00000486704 UNC45AQ9H3U1 944 aa18.02■□□□□ 0.48
HDAC8-218ENST00000486704 KCNMB3Q9NPA1 279 aa18.02■□□□□ 0.48
HDAC8-218ENST00000486704 SAMM50Q9Y512 469 aa18.02■□□□□ 0.48
HDAC8-218ENST00000486704 ARID2Q68CP9 1835 aa18.02■□□□□ 0.47
HDAC8-218ENST00000486704 SMIM35A0A1B0GVV1 85 aa18.01■□□□□ 0.47
HDAC8-218ENST00000486704 ZBTB42B2RXF5 422 aa18.01■□□□□ 0.47
HDAC8-218ENST00000486704 TBX3O15119 743 aa18.01■□□□□ 0.47
HDAC8-218ENST00000486704 RABGGTBP53611 331 aa18.01■□□□□ 0.47
HDAC8-218ENST00000486704 MRPS6P82932 125 aaKnown RBP18.01■□□□□ 0.47
HDAC8-218ENST00000486704 HMGN5P82970 282 aaKnown RBP18.01■□□□□ 0.47
HDAC8-218ENST00000486704 EARS2Q5JPH6 523 aaKnown RBP18.01■□□□□ 0.47
HDAC8-218ENST00000486704 KRT40Q6A162 431 aa18.01■□□□□ 0.47
HDAC8-218ENST00000486704 MTHFD1LQ6UB35 978 aa18.01■□□□□ 0.47
HDAC8-218ENST00000486704 DBF4BQ8NFT6 615 aa18.01■□□□□ 0.47
HDAC8-218ENST00000486704 SEPT8Q92599 483 aa18.01■□□□□ 0.47
HDAC8-218ENST00000486704 FAM20AQ96MK3 541 aa18.01■□□□□ 0.47
HDAC8-218ENST00000486704 CDX2Q99626 313 aaPredicted RBP18.01■□□□□ 0.47
HDAC8-218ENST00000486704 GABBR1Q9UBS5 961 aa18.01■□□□□ 0.47
HDAC8-218ENST00000486704 MYO9BQ13459 2157 aa18■□□□□ 0.47
HDAC8-218ENST00000486704 COL4A4P53420 1690 aaPredicted RBP18■□□□□ 0.47
HDAC8-218ENST00000486704 ST18O60284 1047 aa18■□□□□ 0.47
HDAC8-218ENST00000486704 DEFB103AP81534 67 aa18■□□□□ 0.47
HDAC8-218ENST00000486704 CKAP2LQ8IYA6 745 aa18■□□□□ 0.47
HDAC8-218ENST00000486704 DIS3L2Q8IYB7 885 aaKnown RBP18■□□□□ 0.47
HDAC8-218ENST00000486704 GJA10Q969M2 543 aa18■□□□□ 0.47
HDAC8-218ENST00000486704 TBC1D32Q96NH3 1257 aa18■□□□□ 0.47
HDAC8-218ENST00000486704 IFIH1Q9BYX4 1025 aaKnown RBP18■□□□□ 0.47
HDAC8-218ENST00000486704 OSBPL7Q9BZF2 842 aa18■□□□□ 0.47
HDAC8-218ENST00000486704 NKX2-4Q9H2Z4 354 aa18■□□□□ 0.47
HDAC8-218ENST00000486704 SLC28A3Q9HAS3 691 aa18■□□□□ 0.47
HDAC8-218ENST00000486704 CEP131Q9UPN4 1083 aa18■□□□□ 0.47
HDAC8-218ENST00000486704 SQORQ9Y6N5 450 aa18■□□□□ 0.47
HDAC8-218ENST00000486704 TRANK1O15050 2925 aa18■□□□□ 0.47
HDAC8-218ENST00000486704 KDM3AQ9Y4C1 1321 aa17.99■□□□□ 0.47
HDAC8-218ENST00000486704 FAM205CA6NFA0 338 aa17.99■□□□□ 0.47
HDAC8-218ENST00000486704 CHMP2AO43633 222 aa17.99■□□□□ 0.47
HDAC8-218ENST00000486704 ZNF862O60290 1169 aa17.99■□□□□ 0.47
HDAC8-218ENST00000486704 CCNT1O60563 726 aaKnown RBP17.99■□□□□ 0.47
HDAC8-218ENST00000486704 C22orf31O95567 290 aa17.99■□□□□ 0.47
HDAC8-218ENST00000486704 OATP04181 439 aa17.99■□□□□ 0.47
HDAC8-218ENST00000486704 KLRC1P26715 233 aa17.99■□□□□ 0.47
HDAC8-218ENST00000486704 PRKCEQ02156 737 aa17.99■□□□□ 0.47
HDAC8-218ENST00000486704 PPP2R5CQ13362 524 aa17.99■□□□□ 0.47
HDAC8-218ENST00000486704 GRIN2CQ14957 1233 aa17.99■□□□□ 0.47
HDAC8-218ENST00000486704 IER5Q5VY09 327 aa17.99■□□□□ 0.47
HDAC8-218ENST00000486704 MIER3Q7Z3K6 550 aa17.99■□□□□ 0.47
HDAC8-218ENST00000486704 NME8Q8N427 588 aa17.99■□□□□ 0.47
HDAC8-218ENST00000486704 ZBTB10Q96DT7 871 aa17.99■□□□□ 0.47
HDAC8-218ENST00000486704 FAM49AQ9H0Q0 323 aaPredicted RBP17.99■□□□□ 0.47
HDAC8-218ENST00000486704 VAV3Q9UKW4 847 aa17.99■□□□□ 0.47
HDAC8-218ENST00000486704 CDY2AQ9Y6F7 541 aa17.99■□□□□ 0.47
HDAC8-218ENST00000486704 RALGAPA2Q2PPJ7 1873 aa17.99■□□□□ 0.47
HDAC8-218ENST00000486704 NLRC5Q86WI3 1866 aa17.99■□□□□ 0.47
HDAC8-218ENST00000486704 BTBD18B2RXH4 712 aa17.98■□□□□ 0.47
HDAC8-218ENST00000486704 KIF28PB7ZC32 967 aa17.98■□□□□ 0.47
HDAC8-218ENST00000486704 M0QZ92 97 aa17.98■□□□□ 0.47
HDAC8-218ENST00000486704 GJB5O95377 273 aa17.98■□□□□ 0.47
HDAC8-218ENST00000486704 LPIN1Q14693 890 aa17.98■□□□□ 0.47
HDAC8-218ENST00000486704 UGCGQ16739 394 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms