RNA–Protein interactions for RNA: ENST00000486532.5

R3HDM1-217, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-217ENST00000486532 MEGF9Q9H1U4 602 aa5.29□□□□□ -1.56
R3HDM1-217ENST00000486532 WASF3Q9UPY6 502 aa5.29□□□□□ -1.56
R3HDM1-217ENST00000486532 COMMD10Q9Y6G5 202 aa5.29□□□□□ -1.56
R3HDM1-217ENST00000486532 ZNF839A8K0R7 811 aa5.28□□□□□ -1.56
R3HDM1-217ENST00000486532 CCER2I3L3R5 266 aa5.28□□□□□ -1.56
R3HDM1-217ENST00000486532 AQP7O14520 342 aa5.28□□□□□ -1.56
R3HDM1-217ENST00000486532 MSCO60682 206 aa5.28□□□□□ -1.56
R3HDM1-217ENST00000486532 CNOT4O95628 575 aaKnown RBP5.28□□□□□ -1.56
R3HDM1-217ENST00000486532 PABPC1P11940 636 aaKnown RBP5.28□□□□□ -1.56
R3HDM1-217ENST00000486532 CSF2RBP32927 897 aa5.28□□□□□ -1.56
R3HDM1-217ENST00000486532 RAC3P60763 192 aa5.28□□□□□ -1.56
R3HDM1-217ENST00000486532 R3HDM1Q15032 1099 aaKnown RBP5.28□□□□□ -1.56
R3HDM1-217ENST00000486532 HABP4Q5JVS0 413 aaKnown RBP5.28□□□□□ -1.56
R3HDM1-217ENST00000486532 ANKS3Q6ZW76 656 aa5.28□□□□□ -1.56
R3HDM1-217ENST00000486532 STPG3Q8N7X2 389 aa5.28□□□□□ -1.56
R3HDM1-217ENST00000486532 SLC43A3Q8NBI5 491 aa5.28□□□□□ -1.56
R3HDM1-217ENST00000486532 IPO9Q96P70 1041 aaKnown RBP5.28□□□□□ -1.56
R3HDM1-217ENST00000486532 KCNJ15Q99712 375 aa5.28□□□□□ -1.56
R3HDM1-217ENST00000486532 ST7Q9NRC1 585 aa5.28□□□□□ -1.56
R3HDM1-217ENST00000486532 FBXO10Q9UK96 956 aa5.28□□□□□ -1.56
R3HDM1-217ENST00000486532 hCG_2014768A0A024R1R8 64 aa5.27□□□□□ -1.57
R3HDM1-217ENST00000486532 GOLIM4O00461 696 aa5.27□□□□□ -1.57
R3HDM1-217ENST00000486532 GSTA4O15217 222 aa5.27□□□□□ -1.57
R3HDM1-217ENST00000486532 PEX14O75381 377 aa5.27□□□□□ -1.57
R3HDM1-217ENST00000486532 AMHP03971 560 aa5.27□□□□□ -1.57
R3HDM1-217ENST00000486532 COL6A2P12110 1019 aa5.27□□□□□ -1.57
R3HDM1-217ENST00000486532 POLD1P28340 1107 aa5.27□□□□□ -1.57
R3HDM1-217ENST00000486532 DNAJA1P31689 397 aaKnown RBP5.27□□□□□ -1.57
R3HDM1-217ENST00000486532 GJA4P35212 333 aa5.27□□□□□ -1.57
R3HDM1-217ENST00000486532 GLRBP48167 497 aa5.27□□□□□ -1.57
R3HDM1-217ENST00000486532 ZNF662Q6ZS27 426 aa5.27□□□□□ -1.57
R3HDM1-217ENST00000486532 MAMDC2Q7Z304 686 aaPredicted RBP5.27□□□□□ -1.57
R3HDM1-217ENST00000486532 HNRNPLLQ8WVV9 542 aaKnown RBP5.27□□□□□ -1.57
R3HDM1-217ENST00000486532 SLITRK6Q9H5Y7 841 aa5.27□□□□□ -1.57
R3HDM1-217ENST00000486532 RBPJLQ9UBG7 517 aa5.27□□□□□ -1.57
R3HDM1-217ENST00000486532 PPARGC1AQ9UBK2 798 aaKnown RBP5.27□□□□□ -1.57
R3HDM1-217ENST00000486532 ZFR2Q9UPR6 939 aaKnown RBP5.27□□□□□ -1.57
R3HDM1-217ENST00000486532 CCDC194A0A1B0GVG4 234 aa5.26□□□□□ -1.57
R3HDM1-217ENST00000486532 PPFIA4O75335 1185 aa5.26□□□□□ -1.57
R3HDM1-217ENST00000486532 PURAQ00577 322 aaKnown RBP5.26□□□□□ -1.57
R3HDM1-217ENST00000486532 NAALADL2Q58DX5 795 aa5.26□□□□□ -1.57
R3HDM1-217ENST00000486532 SPDYAQ5MJ70 313 aa5.26□□□□□ -1.57
R3HDM1-217ENST00000486532 GIMAP6Q6P9H5 292 aa5.26□□□□□ -1.57
R3HDM1-217ENST00000486532 CXXC5Q7LFL8 322 aaKnown RBP5.26□□□□□ -1.57
R3HDM1-217ENST00000486532 MCF2L2Q86YR7 1114 aa5.26□□□□□ -1.57
R3HDM1-217ENST00000486532 Q8N1X5 172 aa5.26□□□□□ -1.57
R3HDM1-217ENST00000486532 EDAQ92838 391 aa5.26□□□□□ -1.57
R3HDM1-217ENST00000486532 LRRC37BQ96QE4 947 aa5.26□□□□□ -1.57
R3HDM1-217ENST00000486532 GMLQ99445 158 aa5.26□□□□□ -1.57
R3HDM1-217ENST00000486532 TINF2Q9BSI4 451 aa5.26□□□□□ -1.57
R3HDM1-217ENST00000486532 ZNF341Q9BYN7 854 aa5.26□□□□□ -1.57
R3HDM1-217ENST00000486532 SCAND2PQ9GZW5 306 aaPredicted RBP5.26□□□□□ -1.57
R3HDM1-217ENST00000486532 MAF1Q9H063 256 aa5.26□□□□□ -1.57
R3HDM1-217ENST00000486532 ARHGAP28Q9P2N2 729 aa5.26□□□□□ -1.57
R3HDM1-217ENST00000486532 FEZ2Q9UHY8 353 aaPredicted RBP5.26□□□□□ -1.57
R3HDM1-217ENST00000486532 U2SURPO15042 1029 aaKnown RBP5.25□□□□□ -1.57
R3HDM1-217ENST00000486532 NKRFO15226 690 aaKnown RBP eCLIP5.25□□□□□ -1.57
R3HDM1-217ENST00000486532 MAP4K4O95819 1239 aaPredicted RBP5.25□□□□□ -1.57
R3HDM1-217ENST00000486532 COMTP21964 271 aa5.25□□□□□ -1.57
R3HDM1-217ENST00000486532 COPB2P35606 906 aa5.25□□□□□ -1.57
R3HDM1-217ENST00000486532 FOXD4Q12950 439 aaPredicted RBP5.25□□□□□ -1.57
R3HDM1-217ENST00000486532 PAK1Q13153 545 aa5.25□□□□□ -1.57
R3HDM1-217ENST00000486532 HDAC1Q13547 482 aaPredicted RBP5.25□□□□□ -1.57
R3HDM1-217ENST00000486532 TCTN3Q6NUS6 607 aa5.25□□□□□ -1.57
R3HDM1-217ENST00000486532 KCNT2Q6UVM3 1135 aa5.25□□□□□ -1.57
R3HDM1-217ENST00000486532 CLEC4GQ6UXB4 293 aa5.25□□□□□ -1.57
R3HDM1-217ENST00000486532 POLNQ7Z5Q5 900 aa5.25□□□□□ -1.57
R3HDM1-217ENST00000486532 TAX1BP1Q86VP1 789 aa5.25□□□□□ -1.57
R3HDM1-217ENST00000486532 WDR48Q8TAF3 677 aa5.25□□□□□ -1.57
R3HDM1-217ENST00000486532 ZCRB1Q8TBF4 217 aaKnown RBP5.25□□□□□ -1.57
R3HDM1-217ENST00000486532 NEIL1Q96FI4 390 aaPredicted RBP5.25□□□□□ -1.57
R3HDM1-217ENST00000486532 FAM89AQ96GI7 184 aa5.25□□□□□ -1.57
R3HDM1-217ENST00000486532 WWC2-AS2Q96NR7 200 aa5.25□□□□□ -1.57
R3HDM1-217ENST00000486532 PTPN18Q99952 460 aa5.25□□□□□ -1.57
R3HDM1-217ENST00000486532 TACO1Q9BSH4 297 aaKnown RBP5.25□□□□□ -1.57
R3HDM1-217ENST00000486532 TRIM55Q9BYV6 548 aa5.25□□□□□ -1.57
R3HDM1-217ENST00000486532 ARHGEF4Q9NR80 690 aa5.25□□□□□ -1.57
R3HDM1-217ENST00000486532 KLF4O43474 513 aa5.24□□□□□ -1.57
R3HDM1-217ENST00000486532 LTFP02788 710 aa5.24□□□□□ -1.57
R3HDM1-217ENST00000486532 RPS19P39019 145 aaKnown RBP5.24□□□□□ -1.57
R3HDM1-217ENST00000486532 ETV4P43268 484 aa5.24□□□□□ -1.57
R3HDM1-217ENST00000486532 MMP14P50281 582 aa5.24□□□□□ -1.57
R3HDM1-217ENST00000486532 DBPQ10586 325 aaPredicted RBP5.24□□□□□ -1.57
R3HDM1-217ENST00000486532 GPR19Q15760 415 aa5.24□□□□□ -1.57
R3HDM1-217ENST00000486532 PHF19Q5T6S3 580 aa5.24□□□□□ -1.57
R3HDM1-217ENST00000486532 BTBD8Q5XKL5 378 aa5.24□□□□□ -1.57
R3HDM1-217ENST00000486532 GPR155Q7Z3F1 870 aa5.24□□□□□ -1.57
R3HDM1-217ENST00000486532 MTDHQ86UE4 582 aaKnown RBP5.24□□□□□ -1.57
R3HDM1-217ENST00000486532 SCUBE1Q8IWY4 988 aa5.24□□□□□ -1.57
R3HDM1-217ENST00000486532 ZFPM1Q8IX07 1006 aa5.24□□□□□ -1.57
R3HDM1-217ENST00000486532 AMOTL1Q8IY63 956 aa5.24□□□□□ -1.57
R3HDM1-217ENST00000486532 CELF2-AS1Q8N7Q2 184 aa5.24□□□□□ -1.57
R3HDM1-217ENST00000486532 SNRNP27Q8WVK2 155 aaKnown RBP5.24□□□□□ -1.57
R3HDM1-217ENST00000486532 OSBP2Q969R2 916 aa5.24□□□□□ -1.57
R3HDM1-217ENST00000486532 ADOQ96SZ5 270 aa5.24□□□□□ -1.57
R3HDM1-217ENST00000486532 SENP7Q9BQF6 1050 aa5.24□□□□□ -1.57
R3HDM1-217ENST00000486532 BRINP2Q9C0B6 783 aa5.24□□□□□ -1.57
R3HDM1-217ENST00000486532 PCED1AQ9H1Q7 454 aa5.24□□□□□ -1.57
R3HDM1-217ENST00000486532 IPPKQ9H8X2 491 aa5.24□□□□□ -1.57
R3HDM1-217ENST00000486532 SWAP70Q9UH65 585 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms