RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 TMEM168Q9H0V1 697 aa7.75□□□□□ -1.17
LTN1-206ENST00000486427 FTSJ1Q9UET6 329 aa7.75□□□□□ -1.17
LTN1-206ENST00000486427 C9orf118A6NHY6 69 aa7.74□□□□□ -1.17
LTN1-206ENST00000486427 FOXP2O15409 715 aa7.74□□□□□ -1.17
LTN1-206ENST00000486427 SDHAP31040 664 aa7.74□□□□□ -1.17
LTN1-206ENST00000486427 CNR2P34972 360 aa7.74□□□□□ -1.17
LTN1-206ENST00000486427 CFAP100Q494V2 611 aa7.74□□□□□ -1.17
LTN1-206ENST00000486427 UBE2R2Q712K3 238 aaPredicted RBP7.74□□□□□ -1.17
LTN1-206ENST00000486427 NIM1KQ8IY84 436 aa7.74□□□□□ -1.17
LTN1-206ENST00000486427 WNK4Q96J92 1243 aa7.74□□□□□ -1.17
LTN1-206ENST00000486427 LCORQ96JN0 433 aaPredicted RBP7.74□□□□□ -1.17
LTN1-206ENST00000486427 AMNQ9BXJ7 453 aa7.74□□□□□ -1.17
LTN1-206ENST00000486427 INCENPQ9NQS7 918 aa7.74□□□□□ -1.17
LTN1-206ENST00000486427 UCKL1Q9NWZ5 548 aa7.74□□□□□ -1.17
LTN1-206ENST00000486427 PTPDC1A2A3K4 754 aa7.73□□□□□ -1.17
LTN1-206ENST00000486427 KPNA6O60684 536 aa7.73□□□□□ -1.17
LTN1-206ENST00000486427 HIP1RO75146 1068 aa7.73□□□□□ -1.17
LTN1-206ENST00000486427 CHGBP05060 677 aa7.73□□□□□ -1.17
LTN1-206ENST00000486427 FLT3P36888 993 aa7.73□□□□□ -1.17
LTN1-206ENST00000486427 ARHGAP44Q17R89 818 aa7.73□□□□□ -1.17
LTN1-206ENST00000486427 CNNM4Q6P4Q7 775 aa7.73□□□□□ -1.17
LTN1-206ENST00000486427 LRSAM1Q6UWE0 723 aa7.73□□□□□ -1.17
LTN1-206ENST00000486427 LRRTM3Q86VH5 581 aa7.73□□□□□ -1.17
LTN1-206ENST00000486427 GBP4Q96PP9 640 aa7.73□□□□□ -1.17
LTN1-206ENST00000486427 MTFR1LQ9H019 292 aa7.73□□□□□ -1.17
LTN1-206ENST00000486427 CABP5Q9NP86 173 aa7.73□□□□□ -1.17
LTN1-206ENST00000486427 GALNT8Q9NY28 637 aa7.73□□□□□ -1.17
LTN1-206ENST00000486427 B4GALT6Q9UBX8 382 aa7.73□□□□□ -1.17
LTN1-206ENST00000486427 TLDC2A0PJX2 215 aa7.72□□□□□ -1.17
LTN1-206ENST00000486427 PRAMEF22A3QJZ6 481 aa7.72□□□□□ -1.17
LTN1-206ENST00000486427 B4GALT3O60512 393 aa7.72□□□□□ -1.17
LTN1-206ENST00000486427 IGSF3O75054 1194 aa7.72□□□□□ -1.17
LTN1-206ENST00000486427 IL13RA1P78552 427 aa7.72□□□□□ -1.17
LTN1-206ENST00000486427 KIAA2012Q0VF49 1180 aa7.72□□□□□ -1.17
LTN1-206ENST00000486427 ZFYVE27Q5T4F4 411 aa7.72□□□□□ -1.17
LTN1-206ENST00000486427 CREB3L3Q68CJ9 461 aa7.72□□□□□ -1.17
LTN1-206ENST00000486427 KRTAP17-1Q9BYP8 105 aa7.72□□□□□ -1.17
LTN1-206ENST00000486427 H0Y858 1186 aa7.71□□□□□ -1.18
LTN1-206ENST00000486427 POU3F2P20265 443 aaPredicted RBP7.71□□□□□ -1.18
LTN1-206ENST00000486427 NFATC3Q12968 1075 aa7.71□□□□□ -1.18
LTN1-206ENST00000486427 SKOR2Q2VWA4 1001 aaPredicted RBP7.71□□□□□ -1.18
LTN1-206ENST00000486427 CC2D1AQ6P1N0 951 aaPredicted RBP7.71□□□□□ -1.18
LTN1-206ENST00000486427 KLHL36Q8N4N3 616 aa7.71□□□□□ -1.18
LTN1-206ENST00000486427 HIPK4Q8NE63 616 aa7.71□□□□□ -1.18
LTN1-206ENST00000486427 RELTQ969Z4 430 aa7.71□□□□□ -1.18
LTN1-206ENST00000486427 TARS2Q9BW92 718 aaKnown RBP7.71□□□□□ -1.18
LTN1-206ENST00000486427 PLAAQ9Y263 795 aa7.71□□□□□ -1.18
LTN1-206ENST00000486427 INVSQ9Y283 1065 aa7.71□□□□□ -1.18
LTN1-206ENST00000486427 NEK4P51957 841 aa7.7□□□□□ -1.18
LTN1-206ENST00000486427 KIF11P52732 1056 aa7.7□□□□□ -1.18
LTN1-206ENST00000486427 PCBP1Q15365 356 aaKnown RBP eCLIP7.7□□□□□ -1.18
LTN1-206ENST00000486427 PLEKHG4Q58EX7 1191 aa7.7□□□□□ -1.18
LTN1-206ENST00000486427 UBXN11Q5T124 520 aa7.7□□□□□ -1.18
LTN1-206ENST00000486427 Q6ZUG5 572 aa7.7□□□□□ -1.18
LTN1-206ENST00000486427 FAM124AQ86V42 546 aa7.7□□□□□ -1.18
LTN1-206ENST00000486427 CXorf38Q8TB03 319 aa7.7□□□□□ -1.18
LTN1-206ENST00000486427 FOXRED1Q96CU9 486 aaPredicted RBP7.7□□□□□ -1.18
LTN1-206ENST00000486427 MFSD3Q96ES6 412 aa7.7□□□□□ -1.18
LTN1-206ENST00000486427 ORAI3Q9BRQ5 295 aa7.7□□□□□ -1.18
LTN1-206ENST00000486427 ADAM29Q9UKF5 820 aa7.7□□□□□ -1.18
LTN1-206ENST00000486427 ZDHHC9Q9Y397 364 aa7.7□□□□□ -1.18
LTN1-206ENST00000486427 ASB1Q9Y576 335 aa7.7□□□□□ -1.18
LTN1-206ENST00000486427 ZNF891A8MT65 544 aaPredicted RBP7.69□□□□□ -1.18
LTN1-206ENST00000486427 GOLGA6L22H0YM25 854 aa7.69□□□□□ -1.18
LTN1-206ENST00000486427 FOXD2O60548 495 aaPredicted RBP7.69□□□□□ -1.18
LTN1-206ENST00000486427 ECE1P42892 770 aa7.69□□□□□ -1.18
LTN1-206ENST00000486427 RANGAP1P46060 587 aaPredicted RBP7.69□□□□□ -1.18
LTN1-206ENST00000486427 STILQ15468 1287 aa7.69□□□□□ -1.18
LTN1-206ENST00000486427 BORAQ6PGQ7 559 aa7.69□□□□□ -1.18
LTN1-206ENST00000486427 RTN4RL1Q86UN2 441 aaPredicted RBP7.69□□□□□ -1.18
LTN1-206ENST00000486427 KBTBD2Q8IY47 623 aa7.69□□□□□ -1.18
LTN1-206ENST00000486427 LGI4Q8N135 537 aa7.69□□□□□ -1.18
LTN1-206ENST00000486427 NXPE1Q8N323 547 aa7.69□□□□□ -1.18
LTN1-206ENST00000486427 KIAA1958Q8N8K9 716 aa7.69□□□□□ -1.18
LTN1-206ENST00000486427 ERCC4Q92889 916 aaPredicted RBP7.69□□□□□ -1.18
LTN1-206ENST00000486427 AJUBAQ96IF1 538 aa7.69□□□□□ -1.18
LTN1-206ENST00000486427 KRTAP4-5Q9BYR2 181 aa7.69□□□□□ -1.18
LTN1-206ENST00000486427 BARX1Q9HBU1 254 aaPredicted RBP7.69□□□□□ -1.18
LTN1-206ENST00000486427 H2AFY2Q9P0M6 372 aaPredicted RBP7.69□□□□□ -1.18
LTN1-206ENST00000486427 H7C1D1 291 aa7.68□□□□□ -1.18
LTN1-206ENST00000486427 ATP2A2P16615 1042 aaKnown RBP7.68□□□□□ -1.18
LTN1-206ENST00000486427 PTX3P26022 381 aaPredicted RBP7.68□□□□□ -1.18
LTN1-206ENST00000486427 CSF2RBP32927 897 aa7.68□□□□□ -1.18
LTN1-206ENST00000486427 SEPT7Q16181 437 aaKnown RBP7.68□□□□□ -1.18
LTN1-206ENST00000486427 WDR72Q3MJ13 1102 aa7.68□□□□□ -1.18
LTN1-206ENST00000486427 KANK2Q63ZY3 851 aa7.68□□□□□ -1.18
LTN1-206ENST00000486427 DPP8Q6V1X1 898 aaPredicted RBP7.68□□□□□ -1.18
LTN1-206ENST00000486427 GPR155Q7Z3F1 870 aa7.68□□□□□ -1.18
LTN1-206ENST00000486427 BTBD2Q9BX70 525 aa7.68□□□□□ -1.18
LTN1-206ENST00000486427 KATNBL1Q9H079 304 aa7.68□□□□□ -1.18
LTN1-206ENST00000486427 PTPN22Q9Y2R2 807 aa7.68□□□□□ -1.18
LTN1-206ENST00000486427 TMA7Q9Y2S6 64 aaKnown RBP7.68□□□□□ -1.18
LTN1-206ENST00000486427 F2P00734 622 aa7.67□□□□□ -1.18
LTN1-206ENST00000486427 SLC9A1P19634 815 aa7.67□□□□□ -1.18
LTN1-206ENST00000486427 POLD1P28340 1107 aa7.67□□□□□ -1.18
LTN1-206ENST00000486427 ADCY8P40145 1251 aa7.67□□□□□ -1.18
LTN1-206ENST00000486427 CD83Q01151 205 aa7.67□□□□□ -1.18
LTN1-206ENST00000486427 DSG1Q02413 1049 aa7.67□□□□□ -1.18
LTN1-206ENST00000486427 TOP3AQ13472 1001 aaPredicted RBP7.67□□□□□ -1.18
LTN1-206ENST00000486427 SDE2Q6IQ49 451 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms