RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 LBX2Q6XYB7 198 aa13.2□□□□□ -0.3
PKP4-213ENST00000486254 NLRX1Q86UT6 975 aa13.2□□□□□ -0.3
PKP4-213ENST00000486254 VSIG10LQ86VR7 867 aa13.2□□□□□ -0.3
PKP4-213ENST00000486254 CREBRFQ8IUR6 639 aa13.2□□□□□ -0.3
PKP4-213ENST00000486254 CHST13Q8NET6 341 aa13.2□□□□□ -0.3
PKP4-213ENST00000486254 NSUN6Q8TEA1 469 aaKnown RBP13.2□□□□□ -0.3
PKP4-213ENST00000486254 ZC3H15Q8WU90 426 aaKnown RBP13.2□□□□□ -0.3
PKP4-213ENST00000486254 FIZ1Q96SL8 496 aa13.2□□□□□ -0.3
PKP4-213ENST00000486254 ST6GALNAC4Q9H4F1 302 aa13.2□□□□□ -0.3
PKP4-213ENST00000486254 ACAD9Q9H845 621 aa13.2□□□□□ -0.3
PKP4-213ENST00000486254 CGNQ9P2M7 1197 aaKnown RBP13.2□□□□□ -0.3
PKP4-213ENST00000486254 TCEAL9Q9UHQ7 104 aa13.2□□□□□ -0.3
PKP4-213ENST00000486254 DAAM1Q9Y4D1 1078 aa13.2□□□□□ -0.3
PKP4-213ENST00000486254 SNCAIPQ9Y6H5 919 aa13.2□□□□□ -0.3
PKP4-213ENST00000486254 WDR81Q562E7 1941 aa13.19□□□□□ -0.3
PKP4-213ENST00000486254 SPDYE16A6NNV3 312 aaPredicted RBP13.19□□□□□ -0.3
PKP4-213ENST00000486254 WDR64B1ANS9 1081 aa13.19□□□□□ -0.3
PKP4-213ENST00000486254 EIF3CLB5ME19 914 aaKnown RBP13.19□□□□□ -0.3
PKP4-213ENST00000486254 KIF5CO60282 957 aa13.19□□□□□ -0.3
PKP4-213ENST00000486254 DKC1O60832 514 aaKnown RBP eCLIP13.19□□□□□ -0.3
PKP4-213ENST00000486254 PPP1R37O75864 691 aa13.19□□□□□ -0.3
PKP4-213ENST00000486254 NR2F2P24468 414 aa13.19□□□□□ -0.3
PKP4-213ENST00000486254 HOXD13P35453 343 aa13.19□□□□□ -0.3
PKP4-213ENST00000486254 SNRPFP62306 86 aaKnown RBP13.19□□□□□ -0.3
PKP4-213ENST00000486254 ADAM9Q13443 819 aa13.19□□□□□ -0.3
PKP4-213ENST00000486254 MTF1Q14872 753 aa13.19□□□□□ -0.3
PKP4-213ENST00000486254 SNRNP48Q6IEG0 339 aaKnown RBP13.19□□□□□ -0.3
PKP4-213ENST00000486254 SLC9A9Q8IVB4 645 aa13.19□□□□□ -0.3
PKP4-213ENST00000486254 SMAP1Q8IYB5 467 aaPredicted RBP13.19□□□□□ -0.3
PKP4-213ENST00000486254 PROCA1Q8NCQ7 364 aaPredicted RBP13.19□□□□□ -0.3
PKP4-213ENST00000486254 DNERQ8NFT8 737 aa13.19□□□□□ -0.3
PKP4-213ENST00000486254 ANKRD7Q92527 254 aa13.19□□□□□ -0.3
PKP4-213ENST00000486254 ZNF592Q92610 1267 aa13.19□□□□□ -0.3
PKP4-213ENST00000486254 TAAR1Q96RJ0 339 aa13.19□□□□□ -0.3
PKP4-213ENST00000486254 EIF3CQ99613 913 aaKnown RBP13.19□□□□□ -0.3
PKP4-213ENST00000486254 STRA6Q9BX79 667 aa13.19□□□□□ -0.3
PKP4-213ENST00000486254 HAUS4Q9H6D7 363 aa13.19□□□□□ -0.3
PKP4-213ENST00000486254 MRPL44Q9H9J2 332 aaKnown RBP13.19□□□□□ -0.3
PKP4-213ENST00000486254 ANKEF1Q9NU02 776 aa13.19□□□□□ -0.3
PKP4-213ENST00000486254 CEP72Q9P209 647 aa13.19□□□□□ -0.3
PKP4-213ENST00000486254 FBXO40Q9UH90 709 aa13.19□□□□□ -0.3
PKP4-213ENST00000486254 FBXL5Q9UKA1 691 aa13.19□□□□□ -0.3
PKP4-213ENST00000486254 MYO6Q9UM54 1294 aa13.19□□□□□ -0.3
PKP4-213ENST00000486254 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.19□□□□□ -0.3
PKP4-213ENST00000486254 LCTP09848 1927 aa13.18□□□□□ -0.3
PKP4-213ENST00000486254 ASTN1O14525 1302 aa13.18□□□□□ -0.3
PKP4-213ENST00000486254 KIAA1217Q5T5P2 1943 aa13.18□□□□□ -0.3
PKP4-213ENST00000486254 ARHGEF35A5YM69 484 aa13.18□□□□□ -0.3
PKP4-213ENST00000486254 CHMP2AO43633 222 aa13.18□□□□□ -0.3
PKP4-213ENST00000486254 PPP1R12BO60237 982 aaPredicted RBP13.18□□□□□ -0.3
PKP4-213ENST00000486254 LCA5LO95447 670 aa13.18□□□□□ -0.3
PKP4-213ENST00000486254 CASP5P51878 434 aa13.18□□□□□ -0.3
PKP4-213ENST00000486254 TMEM132BQ14DG7 1078 aa13.18□□□□□ -0.3
PKP4-213ENST00000486254 ARHGAP29Q52LW3 1261 aa13.18□□□□□ -0.3
PKP4-213ENST00000486254 ARHGEF16Q5VV41 709 aa13.18□□□□□ -0.3
PKP4-213ENST00000486254 SAMD1Q6SPF0 538 aaPredicted RBP13.18□□□□□ -0.3
PKP4-213ENST00000486254 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.18□□□□□ -0.3
PKP4-213ENST00000486254 SULF1Q8IWU6 871 aa13.18□□□□□ -0.3
PKP4-213ENST00000486254 EHBP1Q8NDI1 1231 aa13.18□□□□□ -0.3
PKP4-213ENST00000486254 PIGOQ8TEQ8 1089 aa13.18□□□□□ -0.3
PKP4-213ENST00000486254 DCPSQ96C86 337 aaKnown RBP13.18□□□□□ -0.3
PKP4-213ENST00000486254 IWS1Q96ST2 819 aa13.18□□□□□ -0.3
PKP4-213ENST00000486254 DESI2Q9BSY9 194 aa13.18□□□□□ -0.3
PKP4-213ENST00000486254 FHDC1Q9C0D6 1143 aaPredicted RBP13.18□□□□□ -0.3
PKP4-213ENST00000486254 PLCB1Q9NQ66 1216 aa13.18□□□□□ -0.3
PKP4-213ENST00000486254 WRAP73Q9P2S5 460 aaPredicted RBP13.18□□□□□ -0.3
PKP4-213ENST00000486254 ARMCX3Q9UH62 379 aaPredicted RBP13.18□□□□□ -0.3
PKP4-213ENST00000486254 PCDHB13Q9Y5F0 798 aa13.18□□□□□ -0.3
PKP4-213ENST00000486254 PFASO15067 1338 aa13.17□□□□□ -0.3
PKP4-213ENST00000486254 SSU72P8A0A1W2PR75 194 aa13.17□□□□□ -0.3
PKP4-213ENST00000486254 RSPH10B2B2RC85 870 aa13.17□□□□□ -0.3
PKP4-213ENST00000486254 IPO7O95373 1038 aaKnown RBP13.17□□□□□ -0.3
PKP4-213ENST00000486254 GCNT3O95395 438 aa13.17□□□□□ -0.3
PKP4-213ENST00000486254 NR3C1P04150 777 aa13.17□□□□□ -0.3
PKP4-213ENST00000486254 NR3C2P08235 984 aa13.17□□□□□ -0.3
PKP4-213ENST00000486254 RSPH10BP0C881 870 aa13.17□□□□□ -0.3
PKP4-213ENST00000486254 EIF2AK2P19525 551 aaKnown RBP13.17□□□□□ -0.3
PKP4-213ENST00000486254 GNG11P61952 73 aa13.17□□□□□ -0.3
PKP4-213ENST00000486254 PSMC5P62195 406 aa13.17□□□□□ -0.3
PKP4-213ENST00000486254 PPATQ06203 517 aa13.17□□□□□ -0.3
PKP4-213ENST00000486254 MAPK7Q13164 816 aa13.17□□□□□ -0.3
PKP4-213ENST00000486254 DGKZQ13574 1117 aa13.17□□□□□ -0.3
PKP4-213ENST00000486254 BAATQ14032 418 aaPredicted RBP13.17□□□□□ -0.3
PKP4-213ENST00000486254 VGLL4Q14135 290 aa13.17□□□□□ -0.3
PKP4-213ENST00000486254 NSMFQ6X4W1 530 aa13.17□□□□□ -0.3
PKP4-213ENST00000486254 USP50Q70EL3 339 aaPredicted RBP13.17□□□□□ -0.3
PKP4-213ENST00000486254 ZNF720Q7Z2F6 126 aa13.17□□□□□ -0.3
PKP4-213ENST00000486254 NELFCDQ8IXH7 590 aa13.17□□□□□ -0.3
PKP4-213ENST00000486254 C12orf56Q8IXR9 622 aa13.17□□□□□ -0.3
PKP4-213ENST00000486254 TXLNBQ8N3L3 684 aa13.17□□□□□ -0.3
PKP4-213ENST00000486254 NEK11Q8NG66 645 aa13.17□□□□□ -0.3
PKP4-213ENST00000486254 BAP1Q92560 729 aa13.17□□□□□ -0.3
PKP4-213ENST00000486254 UIMC1Q96RL1 719 aa13.17□□□□□ -0.3
PKP4-213ENST00000486254 ZHX3Q9H4I2 956 aa13.17□□□□□ -0.3
PKP4-213ENST00000486254 HOMER2Q9NSB8 354 aa13.17□□□□□ -0.3
PKP4-213ENST00000486254 AGPAT5Q9NUQ2 364 aa13.17□□□□□ -0.3
PKP4-213ENST00000486254 CYP39A1Q9NYL5 469 aa13.17□□□□□ -0.3
PKP4-213ENST00000486254 TBC1D7Q9P0N9 293 aa13.17□□□□□ -0.3
PKP4-213ENST00000486254 LARSQ9P2J5 1176 aaKnown RBP13.17□□□□□ -0.3
PKP4-213ENST00000486254 CSADQ9Y600 493 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms