RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 NMT2O60551 498 aa9.71□□□□□ -0.86
XRN1-212ENST00000486211 GHRP10912 638 aa9.71□□□□□ -0.86
XRN1-212ENST00000486211 NOVP48745 357 aa9.71□□□□□ -0.86
XRN1-212ENST00000486211 ERVFC1P60507 584 aa9.71□□□□□ -0.86
XRN1-212ENST00000486211 ADAM17P78536 824 aa9.71□□□□□ -0.86
XRN1-212ENST00000486211 CCDC96Q2M329 555 aa9.71□□□□□ -0.86
XRN1-212ENST00000486211 HSDL1Q3SXM5 330 aa9.71□□□□□ -0.86
XRN1-212ENST00000486211 MYSM1Q5VVJ2 828 aa9.71□□□□□ -0.86
XRN1-212ENST00000486211 ZDHHC14Q8IZN3 488 aa9.71□□□□□ -0.86
XRN1-212ENST00000486211 RGS22Q8NE09 1264 aa9.71□□□□□ -0.86
XRN1-212ENST00000486211 DCAF4Q8WV16 495 aa9.71□□□□□ -0.86
XRN1-212ENST00000486211 TAAR1Q96RJ0 339 aa9.71□□□□□ -0.86
XRN1-212ENST00000486211 ERVK-5Q9HDB9 667 aa9.71□□□□□ -0.86
XRN1-212ENST00000486211 WDR19Q8NEZ3 1342 aa9.71□□□□□ -0.86
XRN1-212ENST00000486211 FASNP49327 2511 aaKnown RBP9.71□□□□□ -0.86
XRN1-212ENST00000486211 MYH7BA7E2Y1 1941 aa9.7□□□□□ -0.86
XRN1-212ENST00000486211 PPFIA3O75145 1194 aa9.7□□□□□ -0.86
XRN1-212ENST00000486211 NR1I2O75469 434 aa9.7□□□□□ -0.86
XRN1-212ENST00000486211 S1PR4O95977 384 aa9.7□□□□□ -0.86
XRN1-212ENST00000486211 HOXB8P17481 243 aaPredicted RBP9.7□□□□□ -0.86
XRN1-212ENST00000486211 ATP5JP18859 108 aa9.7□□□□□ -0.86
XRN1-212ENST00000486211 UBE3AQ05086 875 aa9.7□□□□□ -0.86
XRN1-212ENST00000486211 LPIN1Q14693 890 aa9.7□□□□□ -0.86
XRN1-212ENST00000486211 STXBP2Q15833 593 aa9.7□□□□□ -0.86
XRN1-212ENST00000486211 PAN2Q504Q3 1202 aaKnown RBP9.7□□□□□ -0.86
XRN1-212ENST00000486211 CEP85Q6P2H3 762 aa9.7□□□□□ -0.86
XRN1-212ENST00000486211 ZNF598Q86UK7 904 aaKnown RBP9.7□□□□□ -0.86
XRN1-212ENST00000486211 RTN4RL1Q86UN2 441 aaPredicted RBP9.7□□□□□ -0.86
XRN1-212ENST00000486211 SYTL5Q8TDW5 730 aaPredicted RBP9.7□□□□□ -0.86
XRN1-212ENST00000486211 MICAL1Q8TDZ2 1067 aa9.7□□□□□ -0.86
XRN1-212ENST00000486211 TBC1D5Q92609 795 aa9.7□□□□□ -0.86
XRN1-212ENST00000486211 OSBP2Q969R2 916 aa9.7□□□□□ -0.86
XRN1-212ENST00000486211 LIMD1Q9UGP4 676 aa9.7□□□□□ -0.86
XRN1-212ENST00000486211 STX8Q9UNK0 236 aa9.7□□□□□ -0.86
XRN1-212ENST00000486211 MTMR7Q9Y216 660 aa9.7□□□□□ -0.86
XRN1-212ENST00000486211 DCDC2BA2VCK2 349 aa9.69□□□□□ -0.86
XRN1-212ENST00000486211 H3BRB1 525 aa9.69□□□□□ -0.86
XRN1-212ENST00000486211 GPR37O15354 613 aa9.69□□□□□ -0.86
XRN1-212ENST00000486211 IPO8O15397 1037 aaKnown RBP9.69□□□□□ -0.86
XRN1-212ENST00000486211 SRGAP2BP0DMP2 458 aa9.69□□□□□ -0.86
XRN1-212ENST00000486211 SDHBP21912 280 aa9.69□□□□□ -0.86
XRN1-212ENST00000486211 FECHP22830 423 aa9.69□□□□□ -0.86
XRN1-212ENST00000486211 GATMP50440 423 aa9.69□□□□□ -0.86
XRN1-212ENST00000486211 MGAT3Q09327 533 aa9.69□□□□□ -0.86
XRN1-212ENST00000486211 CELF3Q5SZQ8 465 aaKnown RBP9.69□□□□□ -0.86
XRN1-212ENST00000486211 FRMPD2Q68DX3 1309 aaPredicted RBP9.69□□□□□ -0.86
XRN1-212ENST00000486211 LLGL2Q6P1M3 1020 aa9.69□□□□□ -0.86
XRN1-212ENST00000486211 NSUN6Q8TEA1 469 aaKnown RBP9.69□□□□□ -0.86
XRN1-212ENST00000486211 RIN2Q8WYP3 895 aaPredicted RBP9.69□□□□□ -0.86
XRN1-212ENST00000486211 SPATA33Q96N06 139 aa9.69□□□□□ -0.86
XRN1-212ENST00000486211 NECTIN4Q96NY8 510 aa9.69□□□□□ -0.86
XRN1-212ENST00000486211 IWS1Q96ST2 819 aa9.69□□□□□ -0.86
XRN1-212ENST00000486211 ADAM7Q9H2U9 754 aa9.69□□□□□ -0.86
XRN1-212ENST00000486211 TUT1Q9H6E5 874 aaKnown RBP9.69□□□□□ -0.86
XRN1-212ENST00000486211 SETD4Q9NVD3 440 aa9.69□□□□□ -0.86
XRN1-212ENST00000486211 PNMA2Q9UL42 364 aa9.69□□□□□ -0.86
XRN1-212ENST00000486211 MRVI1Q9Y6F6 885 aa9.69□□□□□ -0.86
XRN1-212ENST00000486211 TULP1O00294 542 aaPredicted RBP9.68□□□□□ -0.86
XRN1-212ENST00000486211 SORBS3O60504 671 aa9.68□□□□□ -0.86
XRN1-212ENST00000486211 EIF3JO75822 258 aaKnown RBP9.68□□□□□ -0.86
XRN1-212ENST00000486211 ADH1BP00325 375 aa9.68□□□□□ -0.86
XRN1-212ENST00000486211 LGALS2P05162 132 aa9.68□□□□□ -0.86
XRN1-212ENST00000486211 IFIT2P09913 472 aaKnown RBP9.68□□□□□ -0.86
XRN1-212ENST00000486211 SP9P0CG40 484 aa9.68□□□□□ -0.86
XRN1-212ENST00000486211 TDO2P48775 406 aa9.68□□□□□ -0.86
XRN1-212ENST00000486211 SP2Q02086 613 aa9.68□□□□□ -0.86
XRN1-212ENST00000486211 FBXO47Q5MNV8 452 aa9.68□□□□□ -0.86
XRN1-212ENST00000486211 PDE12Q6L8Q7 609 aaKnown RBP9.68□□□□□ -0.86
XRN1-212ENST00000486211 ZSCAN25Q6NSZ9 544 aa9.68□□□□□ -0.86
XRN1-212ENST00000486211 ZC3H14Q6PJT7 736 aaKnown RBP9.68□□□□□ -0.86
XRN1-212ENST00000486211 METTL3Q86U44 580 aaKnown RBP9.68□□□□□ -0.86
XRN1-212ENST00000486211 NPAS4Q8IUM7 802 aa9.68□□□□□ -0.86
XRN1-212ENST00000486211 GPIHBP1Q8IV16 184 aa9.68□□□□□ -0.86
XRN1-212ENST00000486211 SIX5Q8N196 739 aa9.68□□□□□ -0.86
XRN1-212ENST00000486211 CLASRPQ8N2M8 674 aaKnown RBP9.68□□□□□ -0.86
XRN1-212ENST00000486211 TDRD5Q8NAT2 981 aaKnown RBP9.68□□□□□ -0.86
XRN1-212ENST00000486211 GPCPD1Q9NPB8 672 aa9.68□□□□□ -0.86
XRN1-212ENST00000486211 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.68□□□□□ -0.86
XRN1-212ENST00000486211 SUPT16HQ9Y5B9 1047 aaKnown RBP9.68□□□□□ -0.86
XRN1-212ENST00000486211 HIDE1A8MVS5 230 aa9.67□□□□□ -0.86
XRN1-212ENST00000486211 GPAA1O43292 621 aa9.67□□□□□ -0.86
XRN1-212ENST00000486211 FGF18O76093 207 aa9.67□□□□□ -0.86
XRN1-212ENST00000486211 GGPS1O95749 300 aa9.67□□□□□ -0.86
XRN1-212ENST00000486211 WEE2P0C1S8 567 aa9.67□□□□□ -0.86
XRN1-212ENST00000486211 ITIH3Q06033 890 aa9.67□□□□□ -0.86
XRN1-212ENST00000486211 APOBRQ0VD83 1088 aa9.67□□□□□ -0.86
XRN1-212ENST00000486211 PKDCCQ504Y2 493 aa9.67□□□□□ -0.86
XRN1-212ENST00000486211 PLPP4Q5VZY2 271 aa9.67□□□□□ -0.86
XRN1-212ENST00000486211 RUFY4Q6ZNE9 571 aa9.67□□□□□ -0.86
XRN1-212ENST00000486211 LIAT1Q6ZQX7 453 aa9.67□□□□□ -0.86
XRN1-212ENST00000486211 IFNL3Q8IZI9 196 aa9.67□□□□□ -0.86
XRN1-212ENST00000486211 LMBR1Q8WVP7 490 aa9.67□□□□□ -0.86
XRN1-212ENST00000486211 FRAT1Q92837 279 aaPredicted RBP9.67□□□□□ -0.86
XRN1-212ENST00000486211 CHAMP1Q96JM3 812 aa9.67□□□□□ -0.86
XRN1-212ENST00000486211 RMDN3Q96TC7 470 aa9.67□□□□□ -0.86
XRN1-212ENST00000486211 RTKNQ9BST9 563 aa9.67□□□□□ -0.86
XRN1-212ENST00000486211 MAF1Q9H063 256 aa9.67□□□□□ -0.86
XRN1-212ENST00000486211 AGO3Q9H9G7 860 aaKnown RBP9.67□□□□□ -0.86
XRN1-212ENST00000486211 SH2B1Q9NRF2 756 aaPredicted RBP9.67□□□□□ -0.86
XRN1-212ENST00000486211 DLGAP2Q9P1A6 1054 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms