RNA–Protein interactions for RNA: ENST00000485780.1

SHROOM3-207, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 531 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-207ENST00000485780 PSEN2P49810 448 aa10.47□□□□□ -0.73
SHROOM3-207ENST00000485780 STAT5BP51692 787 aa10.47□□□□□ -0.73
SHROOM3-207ENST00000485780 PSMC6P62333 389 aa10.47□□□□□ -0.73
SHROOM3-207ENST00000485780 DNM1Q05193 864 aaKnown RBP10.47□□□□□ -0.73
SHROOM3-207ENST00000485780 PTPN11Q06124 597 aaPredicted RBP10.47□□□□□ -0.73
SHROOM3-207ENST00000485780 PPIGQ13427 754 aaKnown RBP eCLIP10.47□□□□□ -0.73
SHROOM3-207ENST00000485780 MFSD10Q14728 455 aa10.47□□□□□ -0.73
SHROOM3-207ENST00000485780 UGCGQ16739 394 aa10.47□□□□□ -0.73
SHROOM3-207ENST00000485780 KIAA0753Q2KHM9 967 aa10.47□□□□□ -0.73
SHROOM3-207ENST00000485780 TMEM266Q2M3C6 531 aa10.47□□□□□ -0.73
SHROOM3-207ENST00000485780 FAM47CQ5HY64 1035 aa10.47□□□□□ -0.73
SHROOM3-207ENST00000485780 C9orf50Q5SZB4 431 aa10.47□□□□□ -0.73
SHROOM3-207ENST00000485780 FAM160B1Q5W0V3 765 aa10.47□□□□□ -0.73
SHROOM3-207ENST00000485780 MFSD5Q6N075 450 aa10.47□□□□□ -0.73
SHROOM3-207ENST00000485780 FAM126BQ8IXS8 530 aa10.47□□□□□ -0.73
SHROOM3-207ENST00000485780 TMEM199Q8N511 208 aa10.47□□□□□ -0.73
SHROOM3-207ENST00000485780 RNPC3Q96LT9 517 aaKnown RBP10.47□□□□□ -0.73
SHROOM3-207ENST00000485780 AZI2Q9H6S1 392 aa10.47□□□□□ -0.73
SHROOM3-207ENST00000485780 ZNF302Q9NR11 478 aa10.47□□□□□ -0.73
SHROOM3-207ENST00000485780 DAXXQ9UER7 740 aaPredicted RBP10.47□□□□□ -0.73
SHROOM3-207ENST00000485780 FBXO2Q9UK22 296 aaPredicted RBP10.47□□□□□ -0.73
SHROOM3-207ENST00000485780 SIP14410 1827 aa10.47□□□□□ -0.73
SHROOM3-207ENST00000485780 SLC26A4O43511 780 aa10.46□□□□□ -0.73
SHROOM3-207ENST00000485780 MARCH6O60337 910 aa10.46□□□□□ -0.73
SHROOM3-207ENST00000485780 PPP6R2O75170 966 aa10.46□□□□□ -0.73
SHROOM3-207ENST00000485780 SPATA31C1P0DKV0 1188 aa10.46□□□□□ -0.73
SHROOM3-207ENST00000485780 RPA1P27694 616 aa10.46□□□□□ -0.73
SHROOM3-207ENST00000485780 TECP42680 631 aa10.46□□□□□ -0.73
SHROOM3-207ENST00000485780 CHMP4BP1P59074 171 aa10.46□□□□□ -0.73
SHROOM3-207ENST00000485780 PSMC5P62195 406 aa10.46□□□□□ -0.73
SHROOM3-207ENST00000485780 ADAM17P78536 824 aa10.46□□□□□ -0.73
SHROOM3-207ENST00000485780 PLCB4Q15147 1175 aa10.46□□□□□ -0.73
SHROOM3-207ENST00000485780 NBPF20Q3BBV1 942 aa10.46□□□□□ -0.73
SHROOM3-207ENST00000485780 HYIQ5T013 277 aa10.46□□□□□ -0.73
SHROOM3-207ENST00000485780 FOXD4L5Q5VV16 416 aaPredicted RBP10.46□□□□□ -0.73
SHROOM3-207ENST00000485780 SWSAP1Q6NVH7 229 aa10.46□□□□□ -0.73
SHROOM3-207ENST00000485780 DTHD1Q6ZMT9 781 aa10.46□□□□□ -0.73
SHROOM3-207ENST00000485780 C4orf19Q8IY42 314 aa10.46□□□□□ -0.73
SHROOM3-207ENST00000485780 ATP8B4Q8TF62 1192 aa10.46□□□□□ -0.73
SHROOM3-207ENST00000485780 FOXD4L4Q8WXT5 416 aaPredicted RBP10.46□□□□□ -0.73
SHROOM3-207ENST00000485780 ATP6V0A1Q93050 837 aa10.46□□□□□ -0.73
SHROOM3-207ENST00000485780 FAM167AQ96KS9 214 aa10.46□□□□□ -0.73
SHROOM3-207ENST00000485780 AK8Q96MA6 479 aa10.46□□□□□ -0.73
SHROOM3-207ENST00000485780 CTAGE1Q96RT6 745 aa10.46□□□□□ -0.73
SHROOM3-207ENST00000485780 MMTAG2Q9BU76 263 aaKnown RBP10.46□□□□□ -0.73
SHROOM3-207ENST00000485780 POLR3CQ9BUI4 534 aaPredicted RBP10.46□□□□□ -0.73
SHROOM3-207ENST00000485780 RAB34Q9BZG1 259 aa10.46□□□□□ -0.73
SHROOM3-207ENST00000485780 HIPK3Q9H422 1215 aa10.46□□□□□ -0.73
SHROOM3-207ENST00000485780 RNPEPQ9H4A4 650 aa10.46□□□□□ -0.73
SHROOM3-207ENST00000485780 TUFT1Q9NNX1 390 aa10.46□□□□□ -0.73
SHROOM3-207ENST00000485780 CHMP5Q9NZZ3 219 aa10.46□□□□□ -0.73
SHROOM3-207ENST00000485780 WRAP73Q9P2S5 460 aaPredicted RBP10.46□□□□□ -0.73
SHROOM3-207ENST00000485780 GABBR1Q9UBS5 961 aa10.46□□□□□ -0.73
SHROOM3-207ENST00000485780 GTF2IRD1Q9UHL9 959 aa10.46□□□□□ -0.73
SHROOM3-207ENST00000485780 CFAP45Q9UL16 551 aa10.46□□□□□ -0.73
SHROOM3-207ENST00000485780 SAMM50Q9Y512 469 aa10.46□□□□□ -0.73
SHROOM3-207ENST00000485780 SRPRBQ9Y5M8 271 aaKnown RBP10.46□□□□□ -0.73
SHROOM3-207ENST00000485780 STK24Q9Y6E0 443 aa10.46□□□□□ -0.73
SHROOM3-207ENST00000485780 COL1A2P08123 1366 aa10.46□□□□□ -0.74
SHROOM3-207ENST00000485780 EVPLQ92817 2033 aa10.46□□□□□ -0.74
SHROOM3-207ENST00000485780 MBLAC1A4D2B0 266 aaPredicted RBP10.45□□□□□ -0.74
SHROOM3-207ENST00000485780 ZBTB42B2RXF5 422 aa10.45□□□□□ -0.74
SHROOM3-207ENST00000485780 BACH1O14867 736 aa10.45□□□□□ -0.74
SHROOM3-207ENST00000485780 SPTLC2O15270 562 aa10.45□□□□□ -0.74
SHROOM3-207ENST00000485780 B4GALT4O60513 344 aa10.45□□□□□ -0.74
SHROOM3-207ENST00000485780 SLITRK3O94933 977 aa10.45□□□□□ -0.74
SHROOM3-207ENST00000485780 CD4P01730 458 aa10.45□□□□□ -0.74
SHROOM3-207ENST00000485780 LONP1P36776 959 aaKnown RBP10.45□□□□□ -0.74
SHROOM3-207ENST00000485780 QARSP47897 775 aaKnown RBP10.45□□□□□ -0.74
SHROOM3-207ENST00000485780 KRT85P78386 507 aa10.45□□□□□ -0.74
SHROOM3-207ENST00000485780 PRKCEQ02156 737 aa10.45□□□□□ -0.74
SHROOM3-207ENST00000485780 GRIN1Q05586 938 aa10.45□□□□□ -0.74
SHROOM3-207ENST00000485780 UTP14CQ5TAP6 766 aaKnown RBP10.45□□□□□ -0.74
SHROOM3-207ENST00000485780 ZNF697Q5TEC3 545 aa10.45□□□□□ -0.74
SHROOM3-207ENST00000485780 HAUS3Q68CZ6 603 aa10.45□□□□□ -0.74
SHROOM3-207ENST00000485780 NCAPH2Q6IBW4 605 aa10.45□□□□□ -0.74
SHROOM3-207ENST00000485780 PDXDC2PQ6P474 469 aa10.45□□□□□ -0.74
SHROOM3-207ENST00000485780 Q7L0L9 218 aa10.45□□□□□ -0.74
SHROOM3-207ENST00000485780 KCNG4Q8TDN1 519 aa10.45□□□□□ -0.74
SHROOM3-207ENST00000485780 BBXQ8WY36 941 aaPredicted RBP10.45□□□□□ -0.74
SHROOM3-207ENST00000485780 GLG1Q92896 1179 aa10.45□□□□□ -0.74
SHROOM3-207ENST00000485780 CEP89Q96ST8 783 aa10.45□□□□□ -0.74
SHROOM3-207ENST00000485780 EIF2AK1Q9BQI3 630 aaKnown RBP10.45□□□□□ -0.74
SHROOM3-207ENST00000485780 LXNQ9BS40 222 aa10.45□□□□□ -0.74
SHROOM3-207ENST00000485780 TRPV6Q9H1D0 765 aa10.45□□□□□ -0.74
SHROOM3-207ENST00000485780 LRWD1Q9UFC0 647 aa10.45□□□□□ -0.74
SHROOM3-207ENST00000485780 RCOR1Q9UKL0 485 aa10.45□□□□□ -0.74
SHROOM3-207ENST00000485780 NRCAMQ92823 1304 aa10.44□□□□□ -0.74
SHROOM3-207ENST00000485780 POTEB3A0JP26 581 aa10.44□□□□□ -0.74
SHROOM3-207ENST00000485780 VWA3AA6NCI4 1184 aa10.44□□□□□ -0.74
SHROOM3-207ENST00000485780 HBP1O60381 514 aa10.44□□□□□ -0.74
SHROOM3-207ENST00000485780 DKC1O60832 514 aaKnown RBP eCLIP10.44□□□□□ -0.74
SHROOM3-207ENST00000485780 MED24O75448 989 aa10.44□□□□□ -0.74
SHROOM3-207ENST00000485780 OATP04181 439 aa10.44□□□□□ -0.74
SHROOM3-207ENST00000485780 SMIM10L2AP0DMW4 78 aa10.44□□□□□ -0.74
SHROOM3-207ENST00000485780 SMIM10L2BP0DMW5 78 aa10.44□□□□□ -0.74
SHROOM3-207ENST00000485780 MARCKSP29966 332 aaPredicted RBP10.44□□□□□ -0.74
SHROOM3-207ENST00000485780 CYP2C18P33260 490 aa10.44□□□□□ -0.74
SHROOM3-207ENST00000485780 EPHB4P54760 987 aa10.44□□□□□ -0.74
SHROOM3-207ENST00000485780 RBL2Q08999 1139 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms