RNA–Protein interactions for RNA: ENST00000485737.1

SMARCC1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-206ENST00000485737 LUC7L2Q9Y383 392 aaKnown RBP5.21□□□□□ -1.58
SMARCC1-206ENST00000485737 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.21□□□□□ -1.58
SMARCC1-206ENST00000485737 FAM169AQ9Y6X4 670 aa5.21□□□□□ -1.58
SMARCC1-206ENST00000485737 CICQ96RK0 1608 aaPredicted RBP5.21□□□□□ -1.58
SMARCC1-206ENST00000485737 SCN7AQ01118 1682 aa5.21□□□□□ -1.58
SMARCC1-206ENST00000485737 MYH3P11055 1940 aa5.21□□□□□ -1.58
SMARCC1-206ENST00000485737 TNKSO95271 1327 aa5.21□□□□□ -1.58
SMARCC1-206ENST00000485737 ABCB11O95342 1321 aa5.21□□□□□ -1.58
SMARCC1-206ENST00000485737 COL1A1P02452 1464 aaPredicted RBP5.2□□□□□ -1.58
SMARCC1-206ENST00000485737 COL5A2P05997 1499 aaPredicted RBP5.2□□□□□ -1.58
SMARCC1-206ENST00000485737 MAST2Q6P0Q8 1798 aa5.2□□□□□ -1.58
SMARCC1-206ENST00000485737 KRBA1A5PL33 1030 aa5.2□□□□□ -1.58
SMARCC1-206ENST00000485737 ADARB2-AS1A8MUL3 147 aa5.2□□□□□ -1.58
SMARCC1-206ENST00000485737 PJA2O43164 708 aa5.2□□□□□ -1.58
SMARCC1-206ENST00000485737 KLRC4O43908 158 aa5.2□□□□□ -1.58
SMARCC1-206ENST00000485737 RHOBTB3O94955 611 aa5.2□□□□□ -1.58
SMARCC1-206ENST00000485737 IPO7O95373 1038 aaKnown RBP5.2□□□□□ -1.58
SMARCC1-206ENST00000485737 A1BGP04217 495 aa5.2□□□□□ -1.58
SMARCC1-206ENST00000485737 SLC5A1P13866 664 aa5.2□□□□□ -1.58
SMARCC1-206ENST00000485737 TCP1P17987 556 aaKnown RBP5.2□□□□□ -1.58
SMARCC1-206ENST00000485737 CASP1P29466 404 aa5.2□□□□□ -1.58
SMARCC1-206ENST00000485737 INPP5BP32019 993 aa5.2□□□□□ -1.58
SMARCC1-206ENST00000485737 CCT5P48643 541 aa5.2□□□□□ -1.58
SMARCC1-206ENST00000485737 MMP14P50281 582 aa5.2□□□□□ -1.58
SMARCC1-206ENST00000485737 PPARAQ07869 468 aa5.2□□□□□ -1.58
SMARCC1-206ENST00000485737 DDR1Q08345 913 aa5.2□□□□□ -1.58
SMARCC1-206ENST00000485737 DRP2Q13474 957 aa5.2□□□□□ -1.58
SMARCC1-206ENST00000485737 CCINQ13939 588 aa5.2□□□□□ -1.58
SMARCC1-206ENST00000485737 COX20Q5RI15 118 aa5.2□□□□□ -1.58
SMARCC1-206ENST00000485737 TTI2Q6NXR4 508 aa5.2□□□□□ -1.58
SMARCC1-206ENST00000485737 FOXR2Q6PJQ5 311 aa5.2□□□□□ -1.58
SMARCC1-206ENST00000485737 KDM7AQ6ZMT4 941 aa5.2□□□□□ -1.58
SMARCC1-206ENST00000485737 C8orf86Q6ZUL3 223 aa5.2□□□□□ -1.58
SMARCC1-206ENST00000485737 ARHGAP27Q6ZUM4 889 aa5.2□□□□□ -1.58
SMARCC1-206ENST00000485737 B4GALNT4Q76KP1 1039 aa5.2□□□□□ -1.58
SMARCC1-206ENST00000485737 KIAA1328Q86T90 577 aa5.2□□□□□ -1.58
SMARCC1-206ENST00000485737 NLRP10Q86W26 655 aa5.2□□□□□ -1.58
SMARCC1-206ENST00000485737 CREG2Q8IUH2 290 aa5.2□□□□□ -1.58
SMARCC1-206ENST00000485737 FAM114A1Q8IWE2 563 aa5.2□□□□□ -1.58
SMARCC1-206ENST00000485737 ZSCAN29Q8IWY8 852 aaPredicted RBP5.2□□□□□ -1.58
SMARCC1-206ENST00000485737 RGL4Q8IZJ4 473 aa5.2□□□□□ -1.58
SMARCC1-206ENST00000485737 LCORLQ8N3X6 602 aa5.2□□□□□ -1.58
SMARCC1-206ENST00000485737 EIF1ADQ8N9N8 165 aaKnown RBP5.2□□□□□ -1.58
SMARCC1-206ENST00000485737 SPATA5Q8NB90 893 aa5.2□□□□□ -1.58
SMARCC1-206ENST00000485737 C3orf20Q8ND61 904 aa5.2□□□□□ -1.58
SMARCC1-206ENST00000485737 GIMAP8Q8ND71 665 aaPredicted RBP5.2□□□□□ -1.58
SMARCC1-206ENST00000485737 CAGE1Q8TC20 777 aa5.2□□□□□ -1.58
SMARCC1-206ENST00000485737 ESR2Q92731 530 aa5.2□□□□□ -1.58
SMARCC1-206ENST00000485737 SECISBP2LQ93073 1101 aaKnown RBP5.2□□□□□ -1.58
SMARCC1-206ENST00000485737 MYO19Q96H55 970 aa5.2□□□□□ -1.58
SMARCC1-206ENST00000485737 DHTKD1Q96HY7 919 aaPredicted RBP5.2□□□□□ -1.58
SMARCC1-206ENST00000485737 ERGIC2Q96RQ1 377 aa5.2□□□□□ -1.58
SMARCC1-206ENST00000485737 UBAC1Q9BSL1 405 aa5.2□□□□□ -1.58
SMARCC1-206ENST00000485737 PLVAPQ9BX97 442 aa5.2□□□□□ -1.58
SMARCC1-206ENST00000485737 GSX2Q9BZM3 304 aa5.2□□□□□ -1.58
SMARCC1-206ENST00000485737 LACRTQ9GZZ8 138 aa5.2□□□□□ -1.58
SMARCC1-206ENST00000485737 VPS16Q9H269 839 aa5.2□□□□□ -1.58
SMARCC1-206ENST00000485737 CUEDC2Q9H467 287 aa5.2□□□□□ -1.58
SMARCC1-206ENST00000485737 GREM2Q9H772 168 aa5.2□□□□□ -1.58
SMARCC1-206ENST00000485737 SH2D4AQ9H788 454 aa5.2□□□□□ -1.58
SMARCC1-206ENST00000485737 ARMT1Q9H993 441 aa5.2□□□□□ -1.58
SMARCC1-206ENST00000485737 GNL3LQ9NVN8 582 aaKnown RBP5.2□□□□□ -1.58
SMARCC1-206ENST00000485737 VPS54Q9P1Q0 977 aa5.2□□□□□ -1.58
SMARCC1-206ENST00000485737 DMGDHQ9UI17 866 aaKnown RBP5.2□□□□□ -1.58
SMARCC1-206ENST00000485737 HYOU1Q9Y4L1 999 aa5.2□□□□□ -1.58
SMARCC1-206ENST00000485737 LAMB1P07942 1786 aa5.19□□□□□ -1.58
SMARCC1-206ENST00000485737 MYH13Q9UKX3 1938 aa5.19□□□□□ -1.58
SMARCC1-206ENST00000485737 BICDL2A1A5D9 508 aa5.19□□□□□ -1.58
SMARCC1-206ENST00000485737 RASSF10A6NK89 507 aa5.19□□□□□ -1.58
SMARCC1-206ENST00000485737 ENC1O14682 589 aa5.19□□□□□ -1.58
SMARCC1-206ENST00000485737 PSMA7O14818 248 aa5.19□□□□□ -1.58
SMARCC1-206ENST00000485737 SRGAP2O75044 1071 aa5.19□□□□□ -1.58
SMARCC1-206ENST00000485737 TACC1O75410 805 aa5.19□□□□□ -1.58
SMARCC1-206ENST00000485737 ALBP02768 609 aa5.19□□□□□ -1.58
SMARCC1-206ENST00000485737 PROCP04070 461 aa5.19□□□□□ -1.58
SMARCC1-206ENST00000485737 IDEP14735 1019 aa5.19□□□□□ -1.58
SMARCC1-206ENST00000485737 HNRNPH1P31943 449 aaKnown RBP5.19□□□□□ -1.58
SMARCC1-206ENST00000485737 PRCPP42785 496 aa5.19□□□□□ -1.58
SMARCC1-206ENST00000485737 TDO2P48775 406 aa5.19□□□□□ -1.58
SMARCC1-206ENST00000485737 ZC3H6P61129 1189 aaKnown RBP5.19□□□□□ -1.58
SMARCC1-206ENST00000485737 GNGT1P63211 74 aa5.19□□□□□ -1.58
SMARCC1-206ENST00000485737 C2orf54Q08AI8 447 aa5.19□□□□□ -1.58
SMARCC1-206ENST00000485737 TROAPQ12815 778 aa5.19□□□□□ -1.58
SMARCC1-206ENST00000485737 KIF5AQ12840 1032 aa5.19□□□□□ -1.58
SMARCC1-206ENST00000485737 RASGRF1Q13972 1273 aa5.19□□□□□ -1.58
SMARCC1-206ENST00000485737 IL17AQ16552 155 aa5.19□□□□□ -1.58
SMARCC1-206ENST00000485737 OCLNQ16625 522 aa5.19□□□□□ -1.58
SMARCC1-206ENST00000485737 NAALADL2Q58DX5 795 aa5.19□□□□□ -1.58
SMARCC1-206ENST00000485737 TTMPQ5BVD1 217 aa5.19□□□□□ -1.58
SMARCC1-206ENST00000485737 HAUS3Q68CZ6 603 aa5.19□□□□□ -1.58
SMARCC1-206ENST00000485737 C16orf46Q6P387 395 aa5.19□□□□□ -1.58
SMARCC1-206ENST00000485737 LDHAL6AQ6ZMR3 332 aa5.19□□□□□ -1.58
SMARCC1-206ENST00000485737 MICALCLQ6ZW33 695 aa5.19□□□□□ -1.58
SMARCC1-206ENST00000485737 SND1Q7KZF4 910 aaKnown RBP eCLIP5.19□□□□□ -1.58
SMARCC1-206ENST00000485737 CATIPQ7Z7H3 387 aa5.19□□□□□ -1.58
SMARCC1-206ENST00000485737 TREML1Q86YW5 311 aa5.19□□□□□ -1.58
SMARCC1-206ENST00000485737 ANKRD18AQ8IVF6 992 aa5.19□□□□□ -1.58
SMARCC1-206ENST00000485737 GSPT2Q8IYD1 628 aaKnown RBP5.19□□□□□ -1.58
SMARCC1-206ENST00000485737 CMTR1Q8N1G2 835 aaKnown RBP5.19□□□□□ -1.58
SMARCC1-206ENST00000485737 MAGEB6Q8N7X4 407 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms