RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-215ENST00000485550 PCNX4Q63HM2 1172 aa12.14□□□□□ -0.47
HMGN1-215ENST00000485550 TRIM67Q6ZTA4 783 aa12.14□□□□□ -0.47
HMGN1-215ENST00000485550 HEATR3Q7Z4Q2 680 aa12.14□□□□□ -0.47
HMGN1-215ENST00000485550 BMP8AQ7Z5Y6 402 aa12.14□□□□□ -0.47
HMGN1-215ENST00000485550 NLRX1Q86UT6 975 aa12.14□□□□□ -0.47
HMGN1-215ENST00000485550 SERINC5Q86VE9 423 aa12.14□□□□□ -0.47
HMGN1-215ENST00000485550 SUGP1Q8IWZ8 645 aaKnown RBP12.14□□□□□ -0.47
HMGN1-215ENST00000485550 FIBCD1Q8N539 461 aa12.14□□□□□ -0.47
HMGN1-215ENST00000485550 FANCBQ8NB91 859 aa12.14□□□□□ -0.47
HMGN1-215ENST00000485550 SEPT8Q92599 483 aa12.14□□□□□ -0.47
HMGN1-215ENST00000485550 CD207Q9UJ71 328 aa12.14□□□□□ -0.47
HMGN1-215ENST00000485550 PIK3CDO00329 1044 aa12.13□□□□□ -0.47
HMGN1-215ENST00000485550 SYNE3Q6ZMZ3 975 aa12.13□□□□□ -0.47
HMGN1-215ENST00000485550 TMTC3Q6ZXV5 915 aa12.13□□□□□ -0.47
HMGN1-215ENST00000485550 NEK1Q96PY6 1258 aa12.13□□□□□ -0.47
HMGN1-215ENST00000485550 PCDHA6Q9UN73 950 aa12.13□□□□□ -0.47
HMGN1-215ENST00000485550 PCDHA8Q9Y5H6 950 aa12.13□□□□□ -0.47
HMGN1-215ENST00000485550 SPDYE3A6NKU9 549 aa12.12□□□□□ -0.47
HMGN1-215ENST00000485550 ITGB5P18084 799 aa12.12□□□□□ -0.47
HMGN1-215ENST00000485550 TCF7P36402 384 aaPredicted RBP12.12□□□□□ -0.47
HMGN1-215ENST00000485550 NDUFV1P49821 464 aa12.12□□□□□ -0.47
HMGN1-215ENST00000485550 ZXDAP98168 799 aa12.12□□□□□ -0.47
HMGN1-215ENST00000485550 ARHGAP4P98171 946 aa12.12□□□□□ -0.47
HMGN1-215ENST00000485550 ADCK5Q3MIX3 580 aa12.12□□□□□ -0.47
HMGN1-215ENST00000485550 BMP2KLQ5H9B9 411 aa12.12□□□□□ -0.47
HMGN1-215ENST00000485550 RNF20Q5VTR2 975 aa12.12□□□□□ -0.47
HMGN1-215ENST00000485550 XRRA1Q6P2D8 792 aa12.12□□□□□ -0.47
HMGN1-215ENST00000485550 CENPQQ7L2Z9 268 aaPredicted RBP12.12□□□□□ -0.47
HMGN1-215ENST00000485550 FBXL6Q8N531 539 aa12.12□□□□□ -0.47
HMGN1-215ENST00000485550 PDCD7Q8N8D1 485 aaKnown RBP12.12□□□□□ -0.47
HMGN1-215ENST00000485550 IL17RAQ96F46 866 aa12.12□□□□□ -0.47
HMGN1-215ENST00000485550 PGBD1Q96JS3 809 aa12.12□□□□□ -0.47
HMGN1-215ENST00000485550 PRRX2Q99811 253 aa12.12□□□□□ -0.47
HMGN1-215ENST00000485550 SENP7Q9BQF6 1050 aa12.12□□□□□ -0.47
HMGN1-215ENST00000485550 BRPF3Q9ULD4 1205 aa12.12□□□□□ -0.47
HMGN1-215ENST00000485550 C5orf67F2Z3F1 127 aa12.11□□□□□ -0.47
HMGN1-215ENST00000485550 LINC00271P0C7V0 271 aa12.11□□□□□ -0.47
HMGN1-215ENST00000485550 KCNA2P16389 499 aa12.11□□□□□ -0.47
HMGN1-215ENST00000485550 MARK3P27448 753 aa12.11□□□□□ -0.47
HMGN1-215ENST00000485550 BMPR1AP36894 532 aa12.11□□□□□ -0.47
HMGN1-215ENST00000485550 PSEN1P49768 467 aa12.11□□□□□ -0.47
HMGN1-215ENST00000485550 VCPP55072 806 aaKnown RBP12.11□□□□□ -0.47
HMGN1-215ENST00000485550 ADAM15Q13444 863 aa12.11□□□□□ -0.47
HMGN1-215ENST00000485550 WWC2Q6AWC2 1192 aa12.11□□□□□ -0.47
HMGN1-215ENST00000485550 APOA5Q6Q788 366 aa12.11□□□□□ -0.47
HMGN1-215ENST00000485550 SGMS1Q86VZ5 419 aa12.11□□□□□ -0.47
HMGN1-215ENST00000485550 ATOH1Q92858 354 aaPredicted RBP12.11□□□□□ -0.47
HMGN1-215ENST00000485550 GPRASP2Q96D09 838 aa12.11□□□□□ -0.47
HMGN1-215ENST00000485550 C11orf84Q9BUA3 381 aaPredicted RBP12.11□□□□□ -0.47
HMGN1-215ENST00000485550 LMAN2LQ9H0V9 348 aa12.11□□□□□ -0.47
HMGN1-215ENST00000485550 ALG13Q9NP73 1137 aaKnown RBP12.11□□□□□ -0.47
HMGN1-215ENST00000485550 ZNF215Q9UL58 517 aaPredicted RBP12.11□□□□□ -0.47
HMGN1-215ENST00000485550 NAP1L2Q9ULW6 460 aaPredicted RBP12.11□□□□□ -0.47
HMGN1-215ENST00000485550 UBIAD1Q9Y5Z9 338 aa12.11□□□□□ -0.47
HMGN1-215ENST00000485550 V9GY48 417 aaPredicted RBP12.11□□□□□ -0.47
HMGN1-215ENST00000485550 GSTTP1A0A1W2PQM5 241 aa12.1□□□□□ -0.47
HMGN1-215ENST00000485550 RB1P06400 928 aa12.1□□□□□ -0.47
HMGN1-215ENST00000485550 GNAT1P11488 350 aa12.1□□□□□ -0.47
HMGN1-215ENST00000485550 CPA1P15085 419 aa12.1□□□□□ -0.47
HMGN1-215ENST00000485550 HOXC8P31273 242 aa12.1□□□□□ -0.47
HMGN1-215ENST00000485550 NAPAP54920 295 aa12.1□□□□□ -0.47
HMGN1-215ENST00000485550 EXOSC10Q01780 885 aaKnown RBP12.1□□□□□ -0.47
HMGN1-215ENST00000485550 MTMR1Q13613 665 aa12.1□□□□□ -0.47
HMGN1-215ENST00000485550 RTN1Q16799 776 aa12.1□□□□□ -0.47
HMGN1-215ENST00000485550 TYW1BQ6NUM6 668 aa12.1□□□□□ -0.47
HMGN1-215ENST00000485550 DHX32Q7L7V1 743 aaKnown RBP12.1□□□□□ -0.47
HMGN1-215ENST00000485550 ADGRD2Q7Z7M1 963 aa12.1□□□□□ -0.47
HMGN1-215ENST00000485550 GIMAP8Q8ND71 665 aaPredicted RBP12.1□□□□□ -0.47
HMGN1-215ENST00000485550 CYP2W1Q8TAV3 490 aa12.1□□□□□ -0.47
HMGN1-215ENST00000485550 LMBR1Q8WVP7 490 aa12.1□□□□□ -0.47
HMGN1-215ENST00000485550 SEPT1Q8WYJ6 367 aa12.1□□□□□ -0.47
HMGN1-215ENST00000485550 GLG1Q92896 1179 aa12.1□□□□□ -0.47
HMGN1-215ENST00000485550 FNDC1Q4ZHG4 1894 aaPredicted RBP12.1□□□□□ -0.47
HMGN1-215ENST00000485550 ADGRA3Q8IWK6 1321 aa12.1□□□□□ -0.47
HMGN1-215ENST00000485550 CACNA1AO00555 2505 aa12.09□□□□□ -0.47
HMGN1-215ENST00000485550 KLF18A0A0U1RQI7 1052 aa12.09□□□□□ -0.47
HMGN1-215ENST00000485550 GOLGA8AA7E2F4 631 aa12.09□□□□□ -0.47
HMGN1-215ENST00000485550 GOLGA8BA8MQT2 603 aa12.09□□□□□ -0.47
HMGN1-215ENST00000485550 ZBTB43O43298 467 aa12.09□□□□□ -0.47
HMGN1-215ENST00000485550 CDC45O75419 566 aa12.09□□□□□ -0.47
HMGN1-215ENST00000485550 CDC27P30260 824 aa12.09□□□□□ -0.47
HMGN1-215ENST00000485550 IGBP1P78318 339 aa12.09□□□□□ -0.47
HMGN1-215ENST00000485550 ADAM17P78536 824 aa12.09□□□□□ -0.47
HMGN1-215ENST00000485550 CAMK1Q14012 370 aa12.09□□□□□ -0.47
HMGN1-215ENST00000485550 PKN1Q16512 942 aa12.09□□□□□ -0.47
HMGN1-215ENST00000485550 RUFY4Q6ZNE9 571 aa12.09□□□□□ -0.47
HMGN1-215ENST00000485550 APBB2Q92870 758 aa12.09□□□□□ -0.47
HMGN1-215ENST00000485550 ZBTB10Q96DT7 871 aa12.09□□□□□ -0.47
HMGN1-215ENST00000485550 CDHR1Q96JP9 859 aa12.09□□□□□ -0.47
HMGN1-215ENST00000485550 MSLNLQ96KJ4 702 aa12.09□□□□□ -0.47
HMGN1-215ENST00000485550 JADE2Q9NQC1 790 aa12.09□□□□□ -0.47
HMGN1-215ENST00000485550 RBM28Q9NW13 759 aaKnown RBP12.09□□□□□ -0.47
HMGN1-215ENST00000485550 TMEM260Q9NX78 707 aa12.09□□□□□ -0.47
HMGN1-215ENST00000485550 CLEC1BQ9P126 229 aa12.09□□□□□ -0.47
HMGN1-215ENST00000485550 RWDD3Q9Y3V2 267 aa12.09□□□□□ -0.47
HMGN1-215ENST00000485550 MYO15AQ9UKN7 3530 aa12.09□□□□□ -0.47
HMGN1-215ENST00000485550 CNTNAP5Q8WYK1 1306 aa12.09□□□□□ -0.47
HMGN1-215ENST00000485550 SMCO2A6NFE2 343 aa12.08□□□□□ -0.48
HMGN1-215ENST00000485550 LOC730098B7Z3J9 87 aa12.08□□□□□ -0.48
HMGN1-215ENST00000485550 H0Y858 1186 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms