RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 NACC1Q96RE7 527 aa19.66■□□□□ 0.74
CHMP3-207ENST00000485465 PYM1Q9BRP8 204 aaKnown RBP19.66■□□□□ 0.74
CHMP3-207ENST00000485465 ERAP1Q9NZ08 941 aa19.66■□□□□ 0.74
CHMP3-207ENST00000485465 A0A087WWV3 80 aa19.65■□□□□ 0.74
CHMP3-207ENST00000485465 H3BRB1 525 aa19.65■□□□□ 0.74
CHMP3-207ENST00000485465 STBD1O95210 358 aa19.65■□□□□ 0.74
CHMP3-207ENST00000485465 GJB1P08034 283 aa19.65■□□□□ 0.74
CHMP3-207ENST00000485465 PTMSP20962 102 aa19.65■□□□□ 0.74
CHMP3-207ENST00000485465 STAT6P42226 847 aa19.65■□□□□ 0.74
CHMP3-207ENST00000485465 PSMC6P62333 389 aa19.65■□□□□ 0.74
CHMP3-207ENST00000485465 PRKCEQ02156 737 aa19.65■□□□□ 0.74
CHMP3-207ENST00000485465 FAM160A1Q05DH4 1040 aa19.65■□□□□ 0.74
CHMP3-207ENST00000485465 SNW1Q13573 536 aaKnown RBP19.65■□□□□ 0.74
CHMP3-207ENST00000485465 E2F4Q16254 413 aa19.65■□□□□ 0.74
CHMP3-207ENST00000485465 KCNK18Q7Z418 384 aa19.65■□□□□ 0.74
CHMP3-207ENST00000485465 CKAP2LQ8IYA6 745 aa19.65■□□□□ 0.74
CHMP3-207ENST00000485465 FMR1NBQ8N0W7 255 aaPredicted RBP19.65■□□□□ 0.74
CHMP3-207ENST00000485465 IQUBQ8NA54 791 aa19.65■□□□□ 0.74
CHMP3-207ENST00000485465 LRRC15Q8TF66 581 aa19.65■□□□□ 0.74
CHMP3-207ENST00000485465 KAT2BQ92831 832 aa19.65■□□□□ 0.74
CHMP3-207ENST00000485465 DHX58Q96C10 678 aa19.65■□□□□ 0.74
CHMP3-207ENST00000485465 TSEN34Q9BSV6 310 aaKnown RBP19.65■□□□□ 0.74
CHMP3-207ENST00000485465 TUT1Q9H6E5 874 aaKnown RBP19.65■□□□□ 0.74
CHMP3-207ENST00000485465 ZNF215Q9UL58 517 aaPredicted RBP19.65■□□□□ 0.74
CHMP3-207ENST00000485465 OGDHLQ9ULD0 1010 aa19.65■□□□□ 0.74
CHMP3-207ENST00000485465 DNM3Q9UQ16 869 aa19.65■□□□□ 0.74
CHMP3-207ENST00000485465 E9PMD0 336 aa19.64■□□□□ 0.73
CHMP3-207ENST00000485465 ZBTB39O15060 712 aa19.64■□□□□ 0.73
CHMP3-207ENST00000485465 ZNF202O95125 648 aa19.64■□□□□ 0.73
CHMP3-207ENST00000485465 SGPL1O95470 568 aa19.64■□□□□ 0.73
CHMP3-207ENST00000485465 F2P00734 622 aa19.64■□□□□ 0.73
CHMP3-207ENST00000485465 OATP04181 439 aa19.64■□□□□ 0.73
CHMP3-207ENST00000485465 ASGR1P07306 291 aa19.64■□□□□ 0.73
CHMP3-207ENST00000485465 XRCC6P12956 609 aaKnown RBP eCLIP19.64■□□□□ 0.73
CHMP3-207ENST00000485465 MARK3P27448 753 aa19.64■□□□□ 0.73
CHMP3-207ENST00000485465 YWHABP31946 246 aaKnown RBP19.64■□□□□ 0.73
CHMP3-207ENST00000485465 PLCB4Q15147 1175 aa19.64■□□□□ 0.73
CHMP3-207ENST00000485465 NFKBIBQ15653 356 aa19.64■□□□□ 0.73
CHMP3-207ENST00000485465 NAALADL2Q58DX5 795 aa19.64■□□□□ 0.73
CHMP3-207ENST00000485465 XKR3Q5GH77 459 aa19.64■□□□□ 0.73
CHMP3-207ENST00000485465 PIGOQ8TEQ8 1089 aa19.64■□□□□ 0.73
CHMP3-207ENST00000485465 FAM167AQ96KS9 214 aa19.64■□□□□ 0.73
CHMP3-207ENST00000485465 MTG1Q9BT17 334 aaPredicted RBP19.64■□□□□ 0.73
CHMP3-207ENST00000485465 CRISPLD2Q9H0B8 497 aa19.64■□□□□ 0.73
CHMP3-207ENST00000485465 NRBP2Q9NSY0 501 aa19.64■□□□□ 0.73
CHMP3-207ENST00000485465 BLOC1S4Q9NUP1 217 aa19.64■□□□□ 0.73
CHMP3-207ENST00000485465 STK17AQ9UEE5 414 aa19.64■□□□□ 0.73
CHMP3-207ENST00000485465 USP25Q9UHP3 1055 aa19.64■□□□□ 0.73
CHMP3-207ENST00000485465 NR1I2O75469 434 aa19.63■□□□□ 0.73
CHMP3-207ENST00000485465 EYA4O95677 639 aa19.63■□□□□ 0.73
CHMP3-207ENST00000485465 LONRF3Q496Y0 759 aa19.63■□□□□ 0.73
CHMP3-207ENST00000485465 CXCL17Q6UXB2 119 aa19.63■□□□□ 0.73
CHMP3-207ENST00000485465 ANO5Q75V66 913 aa19.63■□□□□ 0.73
CHMP3-207ENST00000485465 OTUD6AQ7L8S5 288 aa19.63■□□□□ 0.73
CHMP3-207ENST00000485465 TRMT1LQ7Z2T5 733 aaKnown RBP19.63■□□□□ 0.73
CHMP3-207ENST00000485465 GPT2Q8TD30 523 aa19.63■□□□□ 0.73
CHMP3-207ENST00000485465 ATP8B4Q8TF62 1192 aa19.63■□□□□ 0.73
CHMP3-207ENST00000485465 U2AF1L4Q8WU68 220 aaKnown RBP19.63■□□□□ 0.73
CHMP3-207ENST00000485465 RAD54LQ92698 747 aa19.63■□□□□ 0.73
CHMP3-207ENST00000485465 RNPEPQ9H4A4 650 aa19.63■□□□□ 0.73
CHMP3-207ENST00000485465 ANKEF1Q9NU02 776 aa19.63■□□□□ 0.73
CHMP3-207ENST00000485465 SERTAD1Q9UHV2 236 aa19.63■□□□□ 0.73
CHMP3-207ENST00000485465 DBR1Q9UK59 544 aaKnown RBP19.63■□□□□ 0.73
CHMP3-207ENST00000485465 FRMPD3Q5JV73 1810 aa19.62■□□□□ 0.73
CHMP3-207ENST00000485465 MOXD2PA6NHM9 499 aa19.62■□□□□ 0.73
CHMP3-207ENST00000485465 HAS3O00219 553 aa19.62■□□□□ 0.73
CHMP3-207ENST00000485465 ACTN4O43707 911 aaKnown RBP19.62■□□□□ 0.73
CHMP3-207ENST00000485465 TFRCP02786 760 aaKnown RBP19.62■□□□□ 0.73
CHMP3-207ENST00000485465 PSEN2P49810 448 aa19.62■□□□□ 0.73
CHMP3-207ENST00000485465 ACLYP53396 1101 aa19.62■□□□□ 0.73
CHMP3-207ENST00000485465 MFSD10Q14728 455 aa19.62■□□□□ 0.73
CHMP3-207ENST00000485465 BBXQ8WY36 941 aaPredicted RBP19.62■□□□□ 0.73
CHMP3-207ENST00000485465 KATNAL1Q9BW62 490 aa19.62■□□□□ 0.73
CHMP3-207ENST00000485465 NIFKQ9BYG3 293 aaKnown RBP19.62■□□□□ 0.73
CHMP3-207ENST00000485465 CUEDC2Q9H467 287 aa19.62■□□□□ 0.73
CHMP3-207ENST00000485465 SEPT9Q9UHD8 586 aaPredicted RBP19.62■□□□□ 0.73
CHMP3-207ENST00000485465 TMEM150BA6NC51 233 aa19.61■□□□□ 0.73
CHMP3-207ENST00000485465 KBTBD13C9JR72 458 aa19.61■□□□□ 0.73
CHMP3-207ENST00000485465 DNM1LO00429 736 aa19.61■□□□□ 0.73
CHMP3-207ENST00000485465 HBP1O60381 514 aa19.61■□□□□ 0.73
CHMP3-207ENST00000485465 CABYRO75952 493 aa19.61■□□□□ 0.73
CHMP3-207ENST00000485465 MBD3O95983 291 aa19.61■□□□□ 0.73
CHMP3-207ENST00000485465 SLFN14P0C7P3 912 aa19.61■□□□□ 0.73
CHMP3-207ENST00000485465 PLA2G4BP0C869 781 aa19.61■□□□□ 0.73
CHMP3-207ENST00000485465 GJA8P48165 433 aa19.61■□□□□ 0.73
CHMP3-207ENST00000485465 MCM6Q14566 821 aa19.61■□□□□ 0.73
CHMP3-207ENST00000485465 KIAA0753Q2KHM9 967 aa19.61■□□□□ 0.73
CHMP3-207ENST00000485465 PLA2G4FQ68DD2 849 aa19.61■□□□□ 0.73
CHMP3-207ENST00000485465 CEP57L1Q8IYX8 460 aa19.61■□□□□ 0.73
CHMP3-207ENST00000485465 LARP4BQ92615 738 aaKnown RBP19.61■□□□□ 0.73
CHMP3-207ENST00000485465 TMEM106CQ9BVX2 250 aa19.61■□□□□ 0.73
CHMP3-207ENST00000485465 DACT1Q9NYF0 836 aa19.61■□□□□ 0.73
CHMP3-207ENST00000485465 TRPC6Q9Y210 931 aa19.61■□□□□ 0.73
CHMP3-207ENST00000485465 CENPFP49454 3210 aa19.61■□□□□ 0.73
CHMP3-207ENST00000485465 NPEPPSP55786 919 aa19.6■□□□□ 0.73
CHMP3-207ENST00000485465 XKR9Q5GH70 373 aa19.6■□□□□ 0.73
CHMP3-207ENST00000485465 KRBA2Q6ZNG9 492 aa19.6■□□□□ 0.73
CHMP3-207ENST00000485465 SYT2Q8N9I0 419 aaPredicted RBP19.6■□□□□ 0.73
CHMP3-207ENST00000485465 CNNM3Q8NE01 707 aa19.6■□□□□ 0.73
CHMP3-207ENST00000485465 CEP170P1Q96L14 293 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms