RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 TNPO1Q92973 898 aaKnown RBP21.93■■□□□ 1.1
COL27A1-205ENST00000485397 PABPC5Q96DU9 382 aaKnown RBP21.93■■□□□ 1.1
COL27A1-205ENST00000485397 UIMC1Q96RL1 719 aa21.93■■□□□ 1.1
COL27A1-205ENST00000485397 TTC3P53804 2025 aa21.92■■□□□ 1.1
COL27A1-205ENST00000485397 GRXCR2A6NFK2 248 aa21.92■■□□□ 1.1
COL27A1-205ENST00000485397 ADAMTS3O15072 1205 aa21.92■■□□□ 1.1
COL27A1-205ENST00000485397 DGKIO75912 1065 aa21.92■■□□□ 1.1
COL27A1-205ENST00000485397 RPLP2P05387 115 aaKnown RBP21.92■■□□□ 1.1
COL27A1-205ENST00000485397 MTHFD1LQ6UB35 978 aa21.92■■□□□ 1.1
COL27A1-205ENST00000485397 GJD3Q8N144 294 aa21.92■■□□□ 1.1
COL27A1-205ENST00000485397 CLP1Q92989 425 aaKnown RBP21.92■■□□□ 1.1
COL27A1-205ENST00000485397 CELF4Q9BZC1 486 aaKnown RBP21.92■■□□□ 1.1
COL27A1-205ENST00000485397 PADI3Q9ULW8 664 aa21.92■■□□□ 1.1
COL27A1-205ENST00000485397 RWDD3Q9Y3V2 267 aa21.92■■□□□ 1.1
COL27A1-205ENST00000485397 SQORQ9Y6N5 450 aa21.92■■□□□ 1.1
COL27A1-205ENST00000485397 RALGAPA2Q2PPJ7 1873 aa21.92■■□□□ 1.1
COL27A1-205ENST00000485397 IGKV6D-21A0A0A0MT36 114 aa21.91■■□□□ 1.1
COL27A1-205ENST00000485397 SMIM35A0A1B0GVV1 85 aa21.91■■□□□ 1.1
COL27A1-205ENST00000485397 FAM86B1E9PN63 330 aa21.91■■□□□ 1.1
COL27A1-205ENST00000485397 M0QZ92 97 aa21.91■■□□□ 1.1
COL27A1-205ENST00000485397 FAM86B2P0C5J1 330 aa21.91■■□□□ 1.1
COL27A1-205ENST00000485397 APOBRQ0VD83 1088 aa21.91■■□□□ 1.1
COL27A1-205ENST00000485397 COL19A1Q14993 1142 aa21.91■■□□□ 1.1
COL27A1-205ENST00000485397 TMEM31Q5JXX7 168 aa21.91■■□□□ 1.1
COL27A1-205ENST00000485397 ABHD15Q6UXT9 468 aa21.91■■□□□ 1.1
COL27A1-205ENST00000485397 PLA2G4DQ86XP0 818 aa21.91■■□□□ 1.1
COL27A1-205ENST00000485397 C11orf84Q9BUA3 381 aaPredicted RBP21.91■■□□□ 1.1
COL27A1-205ENST00000485397 GLT8D2Q9H1C3 349 aa21.91■■□□□ 1.1
COL27A1-205ENST00000485397 C11orf16Q9NQ32 467 aa21.91■■□□□ 1.1
COL27A1-205ENST00000485397 CLDND1Q9NY35 253 aa21.91■■□□□ 1.1
COL27A1-205ENST00000485397 IGSF9BQ9UPX0 1349 aa21.9■■□□□ 1.1
COL27A1-205ENST00000485397 FAM86C2PA6NEL3 165 aa21.9■■□□□ 1.1
COL27A1-205ENST00000485397 PI4K2BG5E9Z4 385 aa21.9■■□□□ 1.1
COL27A1-205ENST00000485397 BACH1O14867 736 aa21.9■■□□□ 1.1
COL27A1-205ENST00000485397 CSPG5O95196 566 aa21.9■■□□□ 1.1
COL27A1-205ENST00000485397 KLRC1P26715 233 aa21.9■■□□□ 1.1
COL27A1-205ENST00000485397 METAP2P50579 478 aaKnown RBP eCLIP21.9■■□□□ 1.1
COL27A1-205ENST00000485397 RCAN1P53805 252 aa21.9■■□□□ 1.1
COL27A1-205ENST00000485397 FGD1P98174 961 aa21.9■■□□□ 1.1
COL27A1-205ENST00000485397 PFKFB3Q16875 520 aaPredicted RBP21.9■■□□□ 1.1
COL27A1-205ENST00000485397 NIPA1Q7RTP0 329 aa21.9■■□□□ 1.1
COL27A1-205ENST00000485397 CCDC60Q8IWA6 550 aaPredicted RBP21.9■■□□□ 1.1
COL27A1-205ENST00000485397 CRIPAKQ8N1N5 446 aa21.9■■□□□ 1.1
COL27A1-205ENST00000485397 FTHL17Q9BXU8 183 aa21.9■■□□□ 1.1
COL27A1-205ENST00000485397 LMAN2LQ9H0V9 348 aa21.9■■□□□ 1.1
COL27A1-205ENST00000485397 MRPL42Q9Y6G3 142 aaKnown RBP21.9■■□□□ 1.1
COL27A1-205ENST00000485397 DHX15O43143 795 aaKnown RBP21.89■■□□□ 1.09
COL27A1-205ENST00000485397 HMGB1P09429 215 aaKnown RBP21.89■■□□□ 1.09
COL27A1-205ENST00000485397 SCG2P13521 617 aa21.89■■□□□ 1.09
COL27A1-205ENST00000485397 SSTR3P32745 418 aaPredicted RBP21.89■■□□□ 1.09
COL27A1-205ENST00000485397 SLC26A2P50443 739 aa21.89■■□□□ 1.09
COL27A1-205ENST00000485397 KRT76Q01546 638 aa21.89■■□□□ 1.09
COL27A1-205ENST00000485397 PAK2Q13177 524 aa21.89■■□□□ 1.09
COL27A1-205ENST00000485397 TMEM266Q2M3C6 531 aa21.89■■□□□ 1.09
COL27A1-205ENST00000485397 PUS10Q3MIT2 529 aaKnown RBP21.89■■□□□ 1.09
COL27A1-205ENST00000485397 Q6ZUG5 572 aa21.89■■□□□ 1.09
COL27A1-205ENST00000485397 NPAS4Q8IUM7 802 aa21.89■■□□□ 1.09
COL27A1-205ENST00000485397 NME8Q8N427 588 aa21.89■■□□□ 1.09
COL27A1-205ENST00000485397 ATP8B4Q8TF62 1192 aa21.89■■□□□ 1.09
COL27A1-205ENST00000485397 TMX1Q9H3N1 280 aa21.89■■□□□ 1.09
COL27A1-205ENST00000485397 ALG13Q9NP73 1137 aaKnown RBP21.89■■□□□ 1.09
COL27A1-205ENST00000485397 KDM3AQ9Y4C1 1321 aa21.88■■□□□ 1.09
COL27A1-205ENST00000485397 IGLV3-22A0A075B6J6 115 aa21.88■■□□□ 1.09
COL27A1-205ENST00000485397 HBP1O60381 514 aa21.88■■□□□ 1.09
COL27A1-205ENST00000485397 CYP3A4P08684 503 aa21.88■■□□□ 1.09
COL27A1-205ENST00000485397 IBSPP21815 317 aaPredicted RBP21.88■■□□□ 1.09
COL27A1-205ENST00000485397 LTBRP36941 435 aa21.88■■□□□ 1.09
COL27A1-205ENST00000485397 HYAL1Q12794 435 aa21.88■■□□□ 1.09
COL27A1-205ENST00000485397 PAN2Q504Q3 1202 aaKnown RBP21.88■■□□□ 1.09
COL27A1-205ENST00000485397 FAM160B1Q5W0V3 765 aa21.88■■□□□ 1.09
COL27A1-205ENST00000485397 SWSAP1Q6NVH7 229 aa21.88■■□□□ 1.09
COL27A1-205ENST00000485397 CMTR2Q8IYT2 770 aaKnown RBP21.88■■□□□ 1.09
COL27A1-205ENST00000485397 CRYGNQ8WXF5 182 aa21.88■■□□□ 1.09
COL27A1-205ENST00000485397 KCNB2Q92953 911 aa21.88■■□□□ 1.09
COL27A1-205ENST00000485397 BRF1Q92994 677 aa21.88■■□□□ 1.09
COL27A1-205ENST00000485397 CDHR5Q9HBB8 845 aa21.88■■□□□ 1.09
COL27A1-205ENST00000485397 ZNF302Q9NR11 478 aa21.88■■□□□ 1.09
COL27A1-205ENST00000485397 GINS2Q9Y248 185 aa21.88■■□□□ 1.09
COL27A1-205ENST00000485397 GPR37L1O60883 481 aa21.87■■□□□ 1.09
COL27A1-205ENST00000485397 ATP4AP20648 1035 aa21.87■■□□□ 1.09
COL27A1-205ENST00000485397 GATMP50440 423 aa21.87■■□□□ 1.09
COL27A1-205ENST00000485397 NFX1Q12986 1120 aaKnown RBP21.87■■□□□ 1.09
COL27A1-205ENST00000485397 CAMK1Q14012 370 aa21.87■■□□□ 1.09
COL27A1-205ENST00000485397 PKN1Q16512 942 aa21.87■■□□□ 1.09
COL27A1-205ENST00000485397 PDXDC2PQ6P474 469 aa21.87■■□□□ 1.09
COL27A1-205ENST00000485397 KIAA0319LQ8IZA0 1049 aa21.87■■□□□ 1.09
COL27A1-205ENST00000485397 JAKMIP1Q96N16 626 aaKnown RBP21.87■■□□□ 1.09
COL27A1-205ENST00000485397 PLVAPQ9BX97 442 aa21.87■■□□□ 1.09
COL27A1-205ENST00000485397 ZMYND12Q9H0C1 365 aa21.87■■□□□ 1.09
COL27A1-205ENST00000485397 PLAGL2Q9UPG8 496 aa21.87■■□□□ 1.09
COL27A1-205ENST00000485397 CCDC196A0A1B0GTZ2 297 aa21.86■■□□□ 1.09
COL27A1-205ENST00000485397 ESYT2A0FGR8 921 aa21.86■■□□□ 1.09
COL27A1-205ENST00000485397 IPO5O00410 1097 aaKnown RBP21.86■■□□□ 1.09
COL27A1-205ENST00000485397 PPFIA3O75145 1194 aa21.86■■□□□ 1.09
COL27A1-205ENST00000485397 MMP1P03956 469 aa21.86■■□□□ 1.09
COL27A1-205ENST00000485397 STAG3L1P0CL83 205 aa21.86■■□□□ 1.09
COL27A1-205ENST00000485397 GTF2F1P35269 517 aaKnown RBP eCLIP21.86■■□□□ 1.096e-6■■□□□ 12.3
COL27A1-205ENST00000485397 DLX2Q07687 328 aaPredicted RBP21.86■■□□□ 1.09
COL27A1-205ENST00000485397 CTC1Q2NKJ3 1217 aa21.86■■□□□ 1.09
COL27A1-205ENST00000485397 MIS18BP1Q6P0N0 1132 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms