RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 HABP4Q5JVS0 413 aaKnown RBP20.02■□□□□ 0.8
SREBF1-213ENST00000485080 TRAF7Q6Q0C0 670 aa20.02■□□□□ 0.8
SREBF1-213ENST00000485080 C16orf59Q7L2K0 433 aa20.02■□□□□ 0.8
SREBF1-213ENST00000485080 WNT8BQ93098 351 aa20.02■□□□□ 0.8
SREBF1-213ENST00000485080 TUBE1Q9UJT0 475 aa20.02■□□□□ 0.8
SREBF1-213ENST00000485080 PCDHA12Q9UN75 941 aa20.02■□□□□ 0.8
SREBF1-213ENST00000485080 ZBTB42B2RXF5 422 aa20.01■□□□□ 0.79
SREBF1-213ENST00000485080 EML1O00423 815 aa20.01■□□□□ 0.79
SREBF1-213ENST00000485080 CHMP2AO43633 222 aa20.01■□□□□ 0.79
SREBF1-213ENST00000485080 EPHA7Q15375 998 aa20.01■□□□□ 0.79
SREBF1-213ENST00000485080 TTC38Q5R3I4 469 aa20.01■□□□□ 0.79
SREBF1-213ENST00000485080 PSRC1Q6PGN9 363 aaPredicted RBP20.01■□□□□ 0.79
SREBF1-213ENST00000485080 LRRC8DQ7L1W4 858 aa20.01■□□□□ 0.79
SREBF1-213ENST00000485080 HSCBQ8IWL3 235 aa20.01■□□□□ 0.79
SREBF1-213ENST00000485080 TMEM60Q9H2L4 133 aa20.01■□□□□ 0.79
SREBF1-213ENST00000485080 CEP131Q9UPN4 1083 aa20.01■□□□□ 0.79
SREBF1-213ENST00000485080 PCDHA2Q9Y5H9 948 aa20.01■□□□□ 0.79
SREBF1-213ENST00000485080 TANC1Q9C0D5 1861 aa20.01■□□□□ 0.79
SREBF1-213ENST00000485080 CXCL10P02778 98 aa20■□□□□ 0.79
SREBF1-213ENST00000485080 MCM7P33993 719 aa20■□□□□ 0.79
SREBF1-213ENST00000485080 LRIT3Q3SXY7 679 aa20■□□□□ 0.79
SREBF1-213ENST00000485080 RILPL1Q5EBL4 403 aa20■□□□□ 0.79
SREBF1-213ENST00000485080 FAM26DQ5JW98 314 aa20■□□□□ 0.79
SREBF1-213ENST00000485080 TMEM240Q5SV17 173 aa20■□□□□ 0.79
SREBF1-213ENST00000485080 RASIP1Q5U651 963 aa20■□□□□ 0.79
SREBF1-213ENST00000485080 C4orf32Q8N8J7 132 aa20■□□□□ 0.79
SREBF1-213ENST00000485080 SCLYQ96I15 445 aa20■□□□□ 0.79
SREBF1-213ENST00000485080 NRBP2Q9NSY0 501 aa20■□□□□ 0.79
SREBF1-213ENST00000485080 SZT2Q5T011 3432 aa19.99■□□□□ 0.79
SREBF1-213ENST00000485080 TET1Q8NFU7 2136 aa19.99■□□□□ 0.79
SREBF1-213ENST00000485080 DKC1O60832 514 aaKnown RBP eCLIP19.99■□□□□ 0.79
SREBF1-213ENST00000485080 STBD1O95210 358 aa19.99■□□□□ 0.79
SREBF1-213ENST00000485080 OATP04181 439 aa19.99■□□□□ 0.79
SREBF1-213ENST00000485080 P4HBP07237 508 aaKnown RBP19.99■□□□□ 0.79
SREBF1-213ENST00000485080 ATP2B1P20020 1258 aa19.99■□□□□ 0.79
SREBF1-213ENST00000485080 PSMC5P62195 406 aa19.99■□□□□ 0.79
SREBF1-213ENST00000485080 GPNMBQ14956 572 aa19.99■□□□□ 0.79
SREBF1-213ENST00000485080 SHHQ15465 462 aa19.99■□□□□ 0.79
SREBF1-213ENST00000485080 ZNF174Q15697 407 aa19.99■□□□□ 0.79
SREBF1-213ENST00000485080 UGCGQ16739 394 aa19.99■□□□□ 0.79
SREBF1-213ENST00000485080 XKR3Q5GH77 459 aa19.99■□□□□ 0.79
SREBF1-213ENST00000485080 ZNF618Q5T7W0 954 aa19.99■□□□□ 0.79
SREBF1-213ENST00000485080 MCTP1Q6DN14 999 aa19.99■□□□□ 0.79
SREBF1-213ENST00000485080 CKAP2LQ8IYA6 745 aa19.99■□□□□ 0.79
SREBF1-213ENST00000485080 NIFKQ9BYG3 293 aaKnown RBP19.99■□□□□ 0.79
SREBF1-213ENST00000485080 TTC12Q9H892 705 aaPredicted RBP19.99■□□□□ 0.79
SREBF1-213ENST00000485080 SMIM35A0A1B0GVV1 85 aa19.98■□□□□ 0.79
SREBF1-213ENST00000485080 LAD1O00515 517 aa19.98■□□□□ 0.79
SREBF1-213ENST00000485080 OR52Z1P0C646 297 aa19.98■□□□□ 0.79
SREBF1-213ENST00000485080 PDIA4P13667 645 aaKnown RBP19.98■□□□□ 0.79
SREBF1-213ENST00000485080 SYT1P21579 422 aa19.98■□□□□ 0.79
SREBF1-213ENST00000485080 THPOP40225 353 aa19.98■□□□□ 0.79
SREBF1-213ENST00000485080 QARSP47897 775 aaKnown RBP19.98■□□□□ 0.79
SREBF1-213ENST00000485080 PRKCEQ02156 737 aa19.98■□□□□ 0.79
SREBF1-213ENST00000485080 TARBP2Q15633 366 aaKnown RBP19.98■□□□□ 0.79
SREBF1-213ENST00000485080 C9orf50Q5SZB4 431 aa19.98■□□□□ 0.79
SREBF1-213ENST00000485080 MTHFD1LQ6UB35 978 aa19.98■□□□□ 0.79
SREBF1-213ENST00000485080 BRAPQ7Z569 592 aa19.98■□□□□ 0.79
SREBF1-213ENST00000485080 RSPH3Q86UC2 560 aa19.98■□□□□ 0.79
SREBF1-213ENST00000485080 NME8Q8N427 588 aa19.98■□□□□ 0.79
SREBF1-213ENST00000485080 NEK9Q8TD19 979 aa19.98■□□□□ 0.79
SREBF1-213ENST00000485080 HERVK_113Q902F9 699 aa19.98■□□□□ 0.79
SREBF1-213ENST00000485080 HSD17B14Q9BPX1 270 aa19.98■□□□□ 0.79
SREBF1-213ENST00000485080 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.98■□□□□ 0.793e-8■■■■□ 25.2
SREBF1-213ENST00000485080 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.98■□□□□ 0.79
SREBF1-213ENST00000485080 RSPH10B2B2RC85 870 aa19.97■□□□□ 0.79
SREBF1-213ENST00000485080 MAGEB2O15479 319 aa19.97■□□□□ 0.79
SREBF1-213ENST00000485080 RSPH10BP0C881 870 aa19.97■□□□□ 0.79
SREBF1-213ENST00000485080 TXKP42681 527 aa19.97■□□□□ 0.79
SREBF1-213ENST00000485080 IGBP1P78318 339 aa19.97■□□□□ 0.79
SREBF1-213ENST00000485080 MBTPS1Q14703 1052 aa19.97■□□□□ 0.79
SREBF1-213ENST00000485080 RUFY4Q6ZNE9 571 aa19.97■□□□□ 0.79
SREBF1-213ENST00000485080 ZNF365Q70YC5 407 aa19.97■□□□□ 0.79
SREBF1-213ENST00000485080 C4orf19Q8IY42 314 aa19.97■□□□□ 0.79
SREBF1-213ENST00000485080 PPME1Q9Y570 386 aa19.97■□□□□ 0.79
SREBF1-213ENST00000485080 NBNO60934 754 aa19.96■□□□□ 0.79
SREBF1-213ENST00000485080 LYPLA2O95372 231 aa19.96■□□□□ 0.79
SREBF1-213ENST00000485080 C22orf31O95567 290 aa19.96■□□□□ 0.79
SREBF1-213ENST00000485080 FGBP02675 491 aa19.96■□□□□ 0.79
SREBF1-213ENST00000485080 KLRC1P26715 233 aa19.96■□□□□ 0.79
SREBF1-213ENST00000485080 ZNF710Q8N1W2 664 aa19.96■□□□□ 0.79
SREBF1-213ENST00000485080 TRAPPC12Q8WVT3 735 aa19.96■□□□□ 0.79
SREBF1-213ENST00000485080 ZSWIM4Q9H7M6 989 aa19.96■□□□□ 0.79
SREBF1-213ENST00000485080 PCDHB6Q9Y5E3 794 aa19.96■□□□□ 0.79
SREBF1-213ENST00000485080 SCN5AQ14524 2016 aa19.96■□□□□ 0.79
SREBF1-213ENST00000485080 SLITRK3O94933 977 aa19.95■□□□□ 0.78
SREBF1-213ENST00000485080 ACRP10323 421 aa19.95■□□□□ 0.78
SREBF1-213ENST00000485080 PRPHP41219 470 aa19.95■□□□□ 0.78
SREBF1-213ENST00000485080 FXR2P51116 673 aaKnown RBP eCLIP19.95■□□□□ 0.78
SREBF1-213ENST00000485080 MGAT3Q09327 533 aa19.95■□□□□ 0.78
SREBF1-213ENST00000485080 PTGDRQ13258 359 aa19.95■□□□□ 0.78
SREBF1-213ENST00000485080 NCAPH2Q6IBW4 605 aa19.95■□□□□ 0.78
SREBF1-213ENST00000485080 LINC01465Q8N7H1 131 aa19.95■□□□□ 0.78
SREBF1-213ENST00000485080 BANK1Q8NDB2 785 aa19.95■□□□□ 0.78
SREBF1-213ENST00000485080 CEP89Q96ST8 783 aa19.95■□□□□ 0.78
SREBF1-213ENST00000485080 EIF2AK1Q9BQI3 630 aaKnown RBP19.95■□□□□ 0.78
SREBF1-213ENST00000485080 SQORQ9Y6N5 450 aa19.95■□□□□ 0.78
SREBF1-213ENST00000485080 CHRNA1P02708 482 aa19.94■□□□□ 0.78
SREBF1-213ENST00000485080 PDIA5Q14554 519 aa19.94■□□□□ 0.78
SREBF1-213ENST00000485080 NBR1Q14596 966 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms