RNA–Protein interactions for RNA: ENST00000484546.1

CDK5RAP2-217, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

TSL 1 (best)

Gene CDK5RAP2, Length 1,269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-217ENST00000484546 PCDHA12Q9UN75 941 aa13.2□□□□□ -0.3
CDK5RAP2-217ENST00000484546 IGKV6D-21A0A0A0MT36 114 aa13.19□□□□□ -0.3
CDK5RAP2-217ENST00000484546 KIF28PB7ZC32 967 aa13.19□□□□□ -0.3
CDK5RAP2-217ENST00000484546 M0QZ92 97 aa13.19□□□□□ -0.3
CDK5RAP2-217ENST00000484546 PARNO95453 639 aaKnown RBP13.19□□□□□ -0.3
CDK5RAP2-217ENST00000484546 RPLP2P05387 115 aaKnown RBP13.19□□□□□ -0.3
CDK5RAP2-217ENST00000484546 PFKMP08237 780 aa13.19□□□□□ -0.3
CDK5RAP2-217ENST00000484546 ACRP10323 421 aa13.19□□□□□ -0.3
CDK5RAP2-217ENST00000484546 CKBP12277 381 aa13.19□□□□□ -0.3
CDK5RAP2-217ENST00000484546 U2AF2P26368 475 aaKnown RBP eCLIP13.19□□□□□ -0.31e-30■■■□□ 14.7
CDK5RAP2-217ENST00000484546 TXKP42681 527 aa13.19□□□□□ -0.3
CDK5RAP2-217ENST00000484546 PPP2R5CQ13362 524 aa13.19□□□□□ -0.3
CDK5RAP2-217ENST00000484546 ZNF174Q15697 407 aa13.19□□□□□ -0.3
CDK5RAP2-217ENST00000484546 TMEM266Q2M3C6 531 aa13.19□□□□□ -0.3
CDK5RAP2-217ENST00000484546 TRIM71Q2Q1W2 868 aaKnown RBP13.19□□□□□ -0.3
CDK5RAP2-217ENST00000484546 TMEM240Q5SV17 173 aa13.19□□□□□ -0.3
CDK5RAP2-217ENST00000484546 DEFB128Q7Z7B8 93 aa13.19□□□□□ -0.3
CDK5RAP2-217ENST00000484546 SERINC5Q86VE9 423 aa13.19□□□□□ -0.3
CDK5RAP2-217ENST00000484546 BBXQ8WY36 941 aaPredicted RBP13.19□□□□□ -0.3
CDK5RAP2-217ENST00000484546 LRCH3Q96II8 777 aa13.19□□□□□ -0.3
CDK5RAP2-217ENST00000484546 RNPC3Q96LT9 517 aaKnown RBP13.19□□□□□ -0.3
CDK5RAP2-217ENST00000484546 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.19□□□□□ -0.33e-9■■■■□ 21.6
CDK5RAP2-217ENST00000484546 NRBP2Q9NSY0 501 aa13.19□□□□□ -0.3
CDK5RAP2-217ENST00000484546 MAFBQ9Y5Q3 323 aaPredicted RBP13.19□□□□□ -0.3
CDK5RAP2-217ENST00000484546 LAMA3Q16787 3333 aa13.19□□□□□ -0.3
CDK5RAP2-217ENST00000484546 COL1A2P08123 1366 aa13.19□□□□□ -0.3
CDK5RAP2-217ENST00000484546 IGSF9BQ9UPX0 1349 aa13.18□□□□□ -0.3
CDK5RAP2-217ENST00000484546 CAND2O75155 1236 aa13.18□□□□□ -0.3
CDK5RAP2-217ENST00000484546 OATP04181 439 aa13.18□□□□□ -0.3
CDK5RAP2-217ENST00000484546 OR52Z1P0C646 297 aa13.18□□□□□ -0.3
CDK5RAP2-217ENST00000484546 IQCF3P0C7M6 154 aa13.18□□□□□ -0.3
CDK5RAP2-217ENST00000484546 ACTN1P12814 892 aa13.18□□□□□ -0.3
CDK5RAP2-217ENST00000484546 PSMC5P62195 406 aa13.18□□□□□ -0.3
CDK5RAP2-217ENST00000484546 PRKCEQ02156 737 aa13.18□□□□□ -0.3
CDK5RAP2-217ENST00000484546 RILPL1Q5EBL4 403 aa13.18□□□□□ -0.3
CDK5RAP2-217ENST00000484546 ZNF484Q5JVG2 852 aa13.18□□□□□ -0.3
CDK5RAP2-217ENST00000484546 ZNF365Q70YC5 407 aa13.18□□□□□ -0.3
CDK5RAP2-217ENST00000484546 BANK1Q8NDB2 785 aa13.18□□□□□ -0.3
CDK5RAP2-217ENST00000484546 VWCEQ96DN2 955 aa13.18□□□□□ -0.3
CDK5RAP2-217ENST00000484546 TTC12Q9H892 705 aaPredicted RBP13.18□□□□□ -0.3
CDK5RAP2-217ENST00000484546 SEPT9Q9UHD8 586 aaPredicted RBP13.18□□□□□ -0.3
CDK5RAP2-217ENST00000484546 RSPH10B2B2RC85 870 aa13.17□□□□□ -0.3
CDK5RAP2-217ENST00000484546 FGBP02675 491 aa13.17□□□□□ -0.3
CDK5RAP2-217ENST00000484546 CTSHP09668 335 aa13.17□□□□□ -0.3
CDK5RAP2-217ENST00000484546 RSPH10BP0C881 870 aa13.17□□□□□ -0.3
CDK5RAP2-217ENST00000484546 ADAM17P78536 824 aa13.17□□□□□ -0.3
CDK5RAP2-217ENST00000484546 ZNF618Q5T7W0 954 aa13.17□□□□□ -0.3
CDK5RAP2-217ENST00000484546 RASIP1Q5U651 963 aa13.17□□□□□ -0.3
CDK5RAP2-217ENST00000484546 TRAF7Q6Q0C0 670 aa13.17□□□□□ -0.3
CDK5RAP2-217ENST00000484546 TRAPPC12Q8WVT3 735 aa13.17□□□□□ -0.3
CDK5RAP2-217ENST00000484546 HAS1Q92839 578 aa13.17□□□□□ -0.3
CDK5RAP2-217ENST00000484546 CCDC43Q96MW1 224 aaKnown RBP13.17□□□□□ -0.3
CDK5RAP2-217ENST00000484546 RAB34Q9BZG1 259 aa13.17□□□□□ -0.3
CDK5RAP2-217ENST00000484546 FAM49AQ9H0Q0 323 aaPredicted RBP13.17□□□□□ -0.3
CDK5RAP2-217ENST00000484546 VAV3Q9UKW4 847 aa13.17□□□□□ -0.3
CDK5RAP2-217ENST00000484546 KAT6AQ92794 2004 aa13.17□□□□□ -0.3
CDK5RAP2-217ENST00000484546 WDR81Q562E7 1941 aa13.16□□□□□ -0.3
CDK5RAP2-217ENST00000484546 ZBBXA8MT70 800 aa13.16□□□□□ -0.3
CDK5RAP2-217ENST00000484546 P4HBP07237 508 aaKnown RBP13.16□□□□□ -0.3
CDK5RAP2-217ENST00000484546 QARSP47897 775 aaKnown RBP13.16□□□□□ -0.3
CDK5RAP2-217ENST00000484546 EPHA7Q15375 998 aa13.16□□□□□ -0.3
CDK5RAP2-217ENST00000484546 XKR3Q5GH77 459 aa13.16□□□□□ -0.3
CDK5RAP2-217ENST00000484546 MTHFD1LQ6UB35 978 aa13.16□□□□□ -0.3
CDK5RAP2-217ENST00000484546 BRAPQ7Z569 592 aa13.16□□□□□ -0.3
CDK5RAP2-217ENST00000484546 METTL13Q8N6R0 699 aa13.16□□□□□ -0.3
CDK5RAP2-217ENST00000484546 ERMNQ8TAM6 284 aa13.16□□□□□ -0.3
CDK5RAP2-217ENST00000484546 NEK9Q8TD19 979 aa13.16□□□□□ -0.3
CDK5RAP2-217ENST00000484546 HERVK_113Q902F9 699 aa13.16□□□□□ -0.3
CDK5RAP2-217ENST00000484546 MBLAC1A4D2B0 266 aaPredicted RBP13.15□□□□□ -0.3
CDK5RAP2-217ENST00000484546 DDX11L8A8MPP1 907 aa13.15□□□□□ -0.3
CDK5RAP2-217ENST00000484546 LAD1O00515 517 aa13.15□□□□□ -0.3
CDK5RAP2-217ENST00000484546 WNT7AO00755 349 aa13.15□□□□□ -0.3
CDK5RAP2-217ENST00000484546 MAGEB2O15479 319 aa13.15□□□□□ -0.3
CDK5RAP2-217ENST00000484546 KLRC1P26715 233 aa13.15□□□□□ -0.3
CDK5RAP2-217ENST00000484546 TMOD1P28289 359 aa13.15□□□□□ -0.3
CDK5RAP2-217ENST00000484546 TBC1D8BQ0IIM8 1120 aa13.15□□□□□ -0.3
CDK5RAP2-217ENST00000484546 BECN1Q14457 450 aa13.15□□□□□ -0.3
CDK5RAP2-217ENST00000484546 NBR1Q14596 966 aa13.15□□□□□ -0.3
CDK5RAP2-217ENST00000484546 GPNMBQ14956 572 aa13.15□□□□□ -0.3
CDK5RAP2-217ENST00000484546 UGCGQ16739 394 aa13.15□□□□□ -0.3
CDK5RAP2-217ENST00000484546 MTERF2Q49AM1 385 aa13.15□□□□□ -0.3
CDK5RAP2-217ENST00000484546 IER5Q5VY09 327 aa13.15□□□□□ -0.3
CDK5RAP2-217ENST00000484546 RUFY4Q6ZNE9 571 aa13.15□□□□□ -0.3
CDK5RAP2-217ENST00000484546 OTUD6AQ7L8S5 288 aa13.15□□□□□ -0.3
CDK5RAP2-217ENST00000484546 OTOP2Q7RTS6 562 aa13.15□□□□□ -0.3
CDK5RAP2-217ENST00000484546 FERMT3Q86UX7 667 aa13.15□□□□□ -0.3
CDK5RAP2-217ENST00000484546 TPH2Q8IWU9 490 aa13.15□□□□□ -0.3
CDK5RAP2-217ENST00000484546 DNAJB3Q8WWF6 145 aa13.15□□□□□ -0.3
CDK5RAP2-217ENST00000484546 MTMR9Q96QG7 549 aa13.15□□□□□ -0.3
CDK5RAP2-217ENST00000484546 MAP7D2Q96T17 732 aa13.15□□□□□ -0.3
CDK5RAP2-217ENST00000484546 LXNQ9BS40 222 aa13.15□□□□□ -0.3
CDK5RAP2-217ENST00000484546 CXXC1Q9P0U4 656 aaPredicted RBP13.15□□□□□ -0.3
CDK5RAP2-217ENST00000484546 PCDHA2Q9Y5H9 948 aa13.15□□□□□ -0.3
CDK5RAP2-217ENST00000484546 SIP14410 1827 aa13.15□□□□□ -0.3
CDK5RAP2-217ENST00000484546 TET1Q8NFU7 2136 aa13.15□□□□□ -0.3
CDK5RAP2-217ENST00000484546 MYH9P35579 1960 aaKnown RBP13.14□□□□□ -0.31
CDK5RAP2-217ENST00000484546 SMIM35A0A1B0GVV1 85 aa13.14□□□□□ -0.31
CDK5RAP2-217ENST00000484546 EML1O00423 815 aa13.14□□□□□ -0.31
CDK5RAP2-217ENST00000484546 NBNO60934 754 aa13.14□□□□□ -0.31
CDK5RAP2-217ENST00000484546 ATP4AP20648 1035 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms