RNA–Protein interactions for RNA: ENST00000484520.1

SPTA1-206, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-206ENST00000484520 ARHGAP45Q92619 1136 aa5.42□□□□□ -1.54
SPTA1-206ENST00000484520 DDX17Q92841 729 aaKnown RBP5.42□□□□□ -1.54
SPTA1-206ENST00000484520 PEX11GQ96HA9 241 aa5.42□□□□□ -1.54
SPTA1-206ENST00000484520 C8orf37Q96NL8 207 aa5.42□□□□□ -1.54
SPTA1-206ENST00000484520 TSPYL4Q9UJ04 414 aa5.42□□□□□ -1.54
SPTA1-206ENST00000484520 CRYBG1Q9Y4K1 1723 aa5.42□□□□□ -1.54
SPTA1-206ENST00000484520 COL14A1Q05707 1796 aaKnown RBP5.42□□□□□ -1.54
SPTA1-206ENST00000484520 COL16A1Q07092 1604 aaPredicted RBP5.41□□□□□ -1.54
SPTA1-206ENST00000484520 SMARCA5O60264 1052 aaPredicted RBP5.41□□□□□ -1.54
SPTA1-206ENST00000484520 PPP1R11O60927 126 aaPredicted RBP5.41□□□□□ -1.54
SPTA1-206ENST00000484520 PPP2R5DQ14738 602 aa5.41□□□□□ -1.54
SPTA1-206ENST00000484520 SLC9A5Q14940 896 aa5.41□□□□□ -1.54
SPTA1-206ENST00000484520 ZYXQ15942 572 aaKnown RBP5.41□□□□□ -1.54
SPTA1-206ENST00000484520 ZKSCAN2Q63HK3 967 aa5.41□□□□□ -1.54
SPTA1-206ENST00000484520 TAB3Q8N5C8 712 aaPredicted RBP5.41□□□□□ -1.54
SPTA1-206ENST00000484520 NETO2Q8NC67 525 aa5.41□□□□□ -1.54
SPTA1-206ENST00000484520 MCMBPQ9BTE3 642 aa5.41□□□□□ -1.54
SPTA1-206ENST00000484520 SMC4Q9NTJ3 1288 aa5.41□□□□□ -1.54
SPTA1-206ENST00000484520 NUDT5Q9UKK9 219 aa5.41□□□□□ -1.54
SPTA1-206ENST00000484520 TRPC5Q9UL62 973 aaPredicted RBP5.41□□□□□ -1.54
SPTA1-206ENST00000484520 PTPRCP08575 1304 aa5.41□□□□□ -1.54
SPTA1-206ENST00000484520 FAM83GA6ND36 823 aa5.4□□□□□ -1.54
SPTA1-206ENST00000484520 ERVV-2B6SEH9 535 aa5.4□□□□□ -1.54
SPTA1-206ENST00000484520 HMGB2P26583 209 aaKnown RBP5.4□□□□□ -1.54
SPTA1-206ENST00000484520 EXOSC9Q06265 439 aaKnown RBP5.4□□□□□ -1.54
SPTA1-206ENST00000484520 CHRNA2Q15822 529 aa5.4□□□□□ -1.54
SPTA1-206ENST00000484520 TWISTNBQ3B726 338 aaPredicted RBP5.4□□□□□ -1.54
SPTA1-206ENST00000484520 CCDC30Q5VVM6 783 aa5.4□□□□□ -1.54
SPTA1-206ENST00000484520 RCSD1Q6JBY9 416 aa5.4□□□□□ -1.54
SPTA1-206ENST00000484520 UNC5AQ6ZN44 842 aa5.4□□□□□ -1.54
SPTA1-206ENST00000484520 KIAA0825Q8IV33 1275 aa5.4□□□□□ -1.54
SPTA1-206ENST00000484520 FTSJ3Q8IY81 847 aaKnown RBP5.4□□□□□ -1.54
SPTA1-206ENST00000484520 LINC00482Q8N8I6 264 aa5.4□□□□□ -1.54
SPTA1-206ENST00000484520 CHST13Q8NET6 341 aa5.4□□□□□ -1.54
SPTA1-206ENST00000484520 SORCS2Q96PQ0 1159 aa5.4□□□□□ -1.54
SPTA1-206ENST00000484520 TM9SF2Q99805 663 aa5.4□□□□□ -1.54
SPTA1-206ENST00000484520 SYT3Q9BQG1 590 aa5.4□□□□□ -1.54
SPTA1-206ENST00000484520 SPON2Q9BUD6 331 aa5.4□□□□□ -1.54
SPTA1-206ENST00000484520 STK31Q9BXU1 1019 aa5.4□□□□□ -1.54
SPTA1-206ENST00000484520 API5Q9BZZ5 524 aaKnown RBP5.4□□□□□ -1.54
SPTA1-206ENST00000484520 SCAND2PQ9GZW5 306 aaPredicted RBP5.4□□□□□ -1.54
SPTA1-206ENST00000484520 INVSQ9Y283 1065 aa5.4□□□□□ -1.54
SPTA1-206ENST00000484520 LAS1LQ9Y4W2 734 aaKnown RBP5.4□□□□□ -1.54
SPTA1-206ENST00000484520 LRRC37A3O60309 1634 aa5.4□□□□□ -1.55
SPTA1-206ENST00000484520 PHLPP1O60346 1717 aa5.4□□□□□ -1.55
SPTA1-206ENST00000484520 ABCA3Q99758 1704 aa5.4□□□□□ -1.55
SPTA1-206ENST00000484520 COL18A1P39060 1754 aa5.39□□□□□ -1.55
SPTA1-206ENST00000484520 MRC1P22897 1456 aa5.39□□□□□ -1.55
SPTA1-206ENST00000484520 A0A087WZG4 1122 aa5.39□□□□□ -1.55
SPTA1-206ENST00000484520 AURKAO14965 403 aa5.39□□□□□ -1.55
SPTA1-206ENST00000484520 RNMTO43148 476 aaKnown RBP5.39□□□□□ -1.55
SPTA1-206ENST00000484520 ZBTB7AO95365 584 aa5.39□□□□□ -1.55
SPTA1-206ENST00000484520 IMPDH2P12268 514 aa5.39□□□□□ -1.55
SPTA1-206ENST00000484520 PHKG2P15735 406 aa5.39□□□□□ -1.55
SPTA1-206ENST00000484520 TCEAL1Q15170 157 aa5.39□□□□□ -1.55
SPTA1-206ENST00000484520 EEF1DP3Q658K8 133 aa5.39□□□□□ -1.55
SPTA1-206ENST00000484520 ATF7IPQ6VMQ6 1270 aa5.39□□□□□ -1.55
SPTA1-206ENST00000484520 RUFY4Q6ZNE9 571 aa5.39□□□□□ -1.55
SPTA1-206ENST00000484520 MCM10Q7L590 875 aa5.39□□□□□ -1.55
SPTA1-206ENST00000484520 ZCRB1Q8TBF4 217 aaKnown RBP5.39□□□□□ -1.55
SPTA1-206ENST00000484520 TSR2Q969E8 191 aaKnown RBP5.39□□□□□ -1.55
SPTA1-206ENST00000484520 GORASP1Q9BQQ3 440 aa5.39□□□□□ -1.55
SPTA1-206ENST00000484520 MTA3Q9BTC8 594 aa5.39□□□□□ -1.55
SPTA1-206ENST00000484520 BTG4Q9NY30 223 aa5.39□□□□□ -1.55
SPTA1-206ENST00000484520 GULP1Q9UBP9 304 aa5.39□□□□□ -1.55
SPTA1-206ENST00000484520 DIS3Q9Y2L1 958 aaKnown RBP5.39□□□□□ -1.55
SPTA1-206ENST00000484520 MEGF6O75095 1541 aa5.38□□□□□ -1.55
SPTA1-206ENST00000484520 PARP4Q9UKK3 1724 aaKnown RBP5.38□□□□□ -1.55
SPTA1-206ENST00000484520 STXBP3O00186 592 aa5.38□□□□□ -1.55
SPTA1-206ENST00000484520 VAMP4O75379 141 aa5.38□□□□□ -1.55
SPTA1-206ENST00000484520 C8BP07358 591 aa5.38□□□□□ -1.55
SPTA1-206ENST00000484520 CYP2C8P10632 490 aa5.38□□□□□ -1.55
SPTA1-206ENST00000484520 C6P13671 934 aa5.38□□□□□ -1.55
SPTA1-206ENST00000484520 KIAA2012Q0VF49 1180 aa5.38□□□□□ -1.55
SPTA1-206ENST00000484520 SPRED1Q7Z699 444 aa5.38□□□□□ -1.55
SPTA1-206ENST00000484520 CPNE8Q86YQ8 564 aa5.38□□□□□ -1.55
SPTA1-206ENST00000484520 UNC5CLQ8IV45 518 aa5.38□□□□□ -1.55
SPTA1-206ENST00000484520 TTC5Q8N0Z6 440 aa5.38□□□□□ -1.55
SPTA1-206ENST00000484520 LGI4Q8N135 537 aa5.38□□□□□ -1.55
SPTA1-206ENST00000484520 ADCY4Q8NFM4 1077 aa5.38□□□□□ -1.55
SPTA1-206ENST00000484520 IL17REQ8NFR9 667 aa5.38□□□□□ -1.55
SPTA1-206ENST00000484520 USP33Q8TEY7 942 aa5.38□□□□□ -1.55
SPTA1-206ENST00000484520 DVL3Q92997 716 aaPredicted RBP5.38□□□□□ -1.55
SPTA1-206ENST00000484520 CCDC136Q96JN2 1154 aa5.38□□□□□ -1.55
SPTA1-206ENST00000484520 FERD3LQ96RJ6 166 aa5.38□□□□□ -1.55
SPTA1-206ENST00000484520 THUMPD2Q9BTF0 503 aaKnown RBP5.38□□□□□ -1.55
SPTA1-206ENST00000484520 C11orf84Q9BUA3 381 aaPredicted RBP5.38□□□□□ -1.55
SPTA1-206ENST00000484520 SSBP3Q9BWW4 388 aaPredicted RBP5.38□□□□□ -1.55
SPTA1-206ENST00000484520 SLC52A2Q9HAB3 445 aa5.38□□□□□ -1.55
SPTA1-206ENST00000484520 ST6GALNAC2Q9UJ37 374 aa5.38□□□□□ -1.55
SPTA1-206ENST00000484520 ZNF214Q9UL59 606 aaPredicted RBP5.38□□□□□ -1.55
SPTA1-206ENST00000484520 DDX19BQ9UMR2 479 aa5.38□□□□□ -1.55
SPTA1-206ENST00000484520 HDAC5Q9UQL6 1122 aa5.38□□□□□ -1.55
SPTA1-206ENST00000484520 SIT1Q9Y3P8 196 aa5.38□□□□□ -1.55
SPTA1-206ENST00000484520 ZNF536O15090 1300 aa5.38□□□□□ -1.55
SPTA1-206ENST00000484520 IBTKQ9P2D0 1353 aaPredicted RBP5.38□□□□□ -1.55
SPTA1-206ENST00000484520 DISP2A7MBM2 1401 aa5.38□□□□□ -1.55
SPTA1-206ENST00000484520 RGS12O14924 1447 aa5.38□□□□□ -1.55
SPTA1-206ENST00000484520 TNS2Q63HR2 1409 aa5.38□□□□□ -1.55
SPTA1-206ENST00000484520 SLIT2O94813 1529 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms