RNA–Protein interactions for RNA: ENST00000484252.5

LIMS2-215, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,099 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-215ENST00000484252 POLR3CQ9BUI4 534 aaPredicted RBP21.57■■□□□ 1.04
LIMS2-215ENST00000484252 LCMT1Q9UIC8 334 aa21.57■■□□□ 1.04
LIMS2-215ENST00000484252 FKBP1AP62942 108 aaKnown RBP21.57■■□□□ 1.04
LIMS2-215ENST00000484252 MRPS25P82663 173 aaKnown RBP21.57■■□□□ 1.04
LIMS2-215ENST00000484252 HDLBPQ00341 1268 aaKnown RBP21.57■■□□□ 1.04
LIMS2-215ENST00000484252 ICA1Q05084 483 aa21.57■■□□□ 1.04
LIMS2-215ENST00000484252 PTK2Q05397 1052 aa21.57■■□□□ 1.04
LIMS2-215ENST00000484252 PODNQ7Z5L7 613 aa21.57■■□□□ 1.04
LIMS2-215ENST00000484252 TEX2Q8IWB9 1127 aa21.57■■□□□ 1.04
LIMS2-215ENST00000484252 PBKQ96KB5 322 aa21.57■■□□□ 1.04
LIMS2-215ENST00000484252 SIPA1L1O43166 1804 aa21.56■■□□□ 1.04
LIMS2-215ENST00000484252 GLI1P08151 1106 aa21.56■■□□□ 1.04
LIMS2-215ENST00000484252 PON1P27169 355 aa21.56■■□□□ 1.04
LIMS2-215ENST00000484252 PSMC6P62333 389 aa21.56■■□□□ 1.04
LIMS2-215ENST00000484252 RPS6KA1Q15418 735 aa21.56■■□□□ 1.04
LIMS2-215ENST00000484252 EIF1ADQ8N9N8 165 aaKnown RBP21.56■■□□□ 1.04
LIMS2-215ENST00000484252 PACSIN1Q9BY11 444 aa21.56■■□□□ 1.04
LIMS2-215ENST00000484252 ANKRD31Q8N7Z5 1873 aa21.56■■□□□ 1.04
LIMS2-215ENST00000484252 F5H6K3 240 aa21.56■■□□□ 1.04
LIMS2-215ENST00000484252 SLC9A1P19634 815 aa21.56■■□□□ 1.04
LIMS2-215ENST00000484252 HOXD13P35453 343 aa21.56■■□□□ 1.04
LIMS2-215ENST00000484252 KLRC3Q07444 240 aa21.56■■□□□ 1.04
LIMS2-215ENST00000484252 SYDE2Q5VT97 1194 aa21.56■■□□□ 1.04
LIMS2-215ENST00000484252 ZNF571Q7Z3V5 609 aaPredicted RBP21.56■■□□□ 1.04
LIMS2-215ENST00000484252 SIAH1Q8IUQ4 282 aa21.56■■□□□ 1.04
LIMS2-215ENST00000484252 USP38Q8NB14 1042 aa21.56■■□□□ 1.04
LIMS2-215ENST00000484252 P2RX7Q99572 595 aaKnown RBP21.56■■□□□ 1.04
LIMS2-215ENST00000484252 EPB41L5Q9HCM4 733 aa21.56■■□□□ 1.04
LIMS2-215ENST00000484252 GTPBP10A4D1E9 387 aaKnown RBP21.55■■□□□ 1.04
LIMS2-215ENST00000484252 MEIS1O00470 390 aa21.55■■□□□ 1.04
LIMS2-215ENST00000484252 TBCAO75347 108 aaKnown RBP21.55■■□□□ 1.04
LIMS2-215ENST00000484252 FLOT1O75955 427 aa21.55■■□□□ 1.04
LIMS2-215ENST00000484252 EYA4O95677 639 aa21.55■■□□□ 1.04
LIMS2-215ENST00000484252 NR3C1P04150 777 aa21.55■■□□□ 1.04
LIMS2-215ENST00000484252 CYP3A4P08684 503 aa21.55■■□□□ 1.04
LIMS2-215ENST00000484252 ACTN1P12814 892 aa21.55■■□□□ 1.04
LIMS2-215ENST00000484252 GAP43P17677 238 aa21.55■■□□□ 1.04
LIMS2-215ENST00000484252 NOP2P46087 812 aaKnown RBP21.55■■□□□ 1.04
LIMS2-215ENST00000484252 IRAK1P51617 712 aa21.55■■□□□ 1.04
LIMS2-215ENST00000484252 GUCY2DQ02846 1103 aa21.55■■□□□ 1.04
LIMS2-215ENST00000484252 EPHA7Q15375 998 aa21.55■■□□□ 1.04
LIMS2-215ENST00000484252 VPS36Q86VN1 386 aa21.55■■□□□ 1.04
LIMS2-215ENST00000484252 WHAMMQ8TF30 809 aa21.55■■□□□ 1.04
LIMS2-215ENST00000484252 CAPS2Q9BXY5 557 aa21.55■■□□□ 1.04
LIMS2-215ENST00000484252 VAV3Q9UKW4 847 aa21.55■■□□□ 1.04
LIMS2-215ENST00000484252 DDTLA6NHG4 134 aaPredicted RBP21.54■■□□□ 1.04
LIMS2-215ENST00000484252 FAM86B1E9PN63 330 aa21.54■■□□□ 1.04
LIMS2-215ENST00000484252 FAM86B2P0C5J1 330 aa21.54■■□□□ 1.04
LIMS2-215ENST00000484252 MYBP10242 640 aa21.54■■□□□ 1.04
LIMS2-215ENST00000484252 SKOR1P84550 965 aa21.54■■□□□ 1.04
LIMS2-215ENST00000484252 ENOX2Q16206 610 aaKnown RBP21.54■■□□□ 1.04
LIMS2-215ENST00000484252 KRT12Q99456 494 aa21.54■■□□□ 1.04
LIMS2-215ENST00000484252 FAM198AQ9UFP1 575 aa21.54■■□□□ 1.04
LIMS2-215ENST00000484252 NAGPAQ9UK23 515 aa21.54■■□□□ 1.04
LIMS2-215ENST00000484252 TMEM59LQ9UK28 342 aa21.54■■□□□ 1.04
LIMS2-215ENST00000484252 TRPC5Q9UL62 973 aaPredicted RBP21.54■■□□□ 1.04
LIMS2-215ENST00000484252 MSH4O15457 936 aa21.54■■□□□ 1.04
LIMS2-215ENST00000484252 SLURP2P0DP57 97 aa21.54■■□□□ 1.04
LIMS2-215ENST00000484252 CARSP49589 748 aaKnown RBP21.54■■□□□ 1.04
LIMS2-215ENST00000484252 TCP10Q12799 353 aa21.54■■□□□ 1.04
LIMS2-215ENST00000484252 DNAJC21Q5F1R6 531 aaKnown RBP21.54■■□□□ 1.04
LIMS2-215ENST00000484252 C10orf67Q8IYJ2 551 aa21.54■■□□□ 1.04
LIMS2-215ENST00000484252 OLFML3Q9NRN5 406 aa21.54■■□□□ 1.04
LIMS2-215ENST00000484252 INTUQ9ULD6 942 aa21.54■■□□□ 1.04
LIMS2-215ENST00000484252 NFU1Q9UMS0 254 aa21.54■■□□□ 1.04
LIMS2-215ENST00000484252 NRXN2Q9P2S2 1712 aa21.54■■□□□ 1.04
LIMS2-215ENST00000484252 ASTN1O14525 1302 aa21.53■■□□□ 1.04
LIMS2-215ENST00000484252 AKAP3O75969 853 aa21.53■■□□□ 1.04
LIMS2-215ENST00000484252 KIF4AO95239 1232 aa21.53■■□□□ 1.04
LIMS2-215ENST00000484252 CFAP58Q5T655 872 aa21.53■■□□□ 1.04
LIMS2-215ENST00000484252 BTNL9Q6UXG8 535 aa21.53■■□□□ 1.04
LIMS2-215ENST00000484252 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.53■■□□□ 1.04
LIMS2-215ENST00000484252 CD302Q8IX05 232 aa21.53■■□□□ 1.04
LIMS2-215ENST00000484252 IQCKQ8N0W5 287 aa21.53■■□□□ 1.04
LIMS2-215ENST00000484252 LMBR1Q8WVP7 490 aa21.53■■□□□ 1.04
LIMS2-215ENST00000484252 ZIM3Q96PE6 472 aa21.53■■□□□ 1.04
LIMS2-215ENST00000484252 FAM107BQ9H098 131 aa21.53■■□□□ 1.04
LIMS2-215ENST00000484252 NENFQ9UMX5 172 aa21.53■■□□□ 1.04
LIMS2-215ENST00000484252 RABGAP1Q9Y3P9 1069 aa21.53■■□□□ 1.04
LIMS2-215ENST00000484252 A0A0A6YYK5 440 aaPredicted RBP21.52■■□□□ 1.04
LIMS2-215ENST00000484252 FAM196BA6NMK8 535 aa21.52■■□□□ 1.04
LIMS2-215ENST00000484252 EIF3DO15371 548 aaKnown RBP eCLIP21.52■■□□□ 1.04
LIMS2-215ENST00000484252 GFPT2O94808 682 aa21.52■■□□□ 1.04
LIMS2-215ENST00000484252 NDUFB10O96000 172 aa21.52■■□□□ 1.04
LIMS2-215ENST00000484252 TRAF1Q13077 416 aa21.52■■□□□ 1.04
LIMS2-215ENST00000484252 NFIL3Q16649 462 aa21.52■■□□□ 1.04
LIMS2-215ENST00000484252 ABCB5Q2M3G0 1257 aa21.52■■□□□ 1.04
LIMS2-215ENST00000484252 DCAF17Q5H9S7 520 aaPredicted RBP21.52■■□□□ 1.04
LIMS2-215ENST00000484252 ALKBH5Q6P6C2 394 aaKnown RBP21.52■■□□□ 1.04
LIMS2-215ENST00000484252 ACTRT1Q8TDG2 376 aa21.52■■□□□ 1.04
LIMS2-215ENST00000484252 CALR3Q96L12 384 aaKnown RBP21.52■■□□□ 1.04
LIMS2-215ENST00000484252 BHMT2Q9H2M3 363 aa21.52■■□□□ 1.04
LIMS2-215ENST00000484252 SYNPO2Q9UMS6 1093 aa21.52■■□□□ 1.04
LIMS2-215ENST00000484252 PIK3CDO00329 1044 aa21.52■■□□□ 1.04
LIMS2-215ENST00000484252 PDE6BP35913 854 aa21.52■■□□□ 1.04
LIMS2-215ENST00000484252 DNA2P51530 1060 aa21.52■■□□□ 1.04
LIMS2-215ENST00000484252 JAM2P57087 298 aa21.52■■□□□ 1.04
LIMS2-215ENST00000484252 IKQ13123 557 aaPredicted RBP21.52■■□□□ 1.04
LIMS2-215ENST00000484252 USH1GQ495M9 461 aa21.52■■□□□ 1.04
LIMS2-215ENST00000484252 TTMPQ5BVD1 217 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms