RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 DNM2P50570 870 aa9.78□□□□□ -0.84
CDC42SE1-204ENST00000483763 ERVK-24P63145 666 aa9.78□□□□□ -0.84
CDC42SE1-204ENST00000483763 FKBP3Q00688 224 aaKnown RBP9.78□□□□□ -0.84
CDC42SE1-204ENST00000483763 SYCP1Q15431 976 aa9.78□□□□□ -0.84
CDC42SE1-204ENST00000483763 LBX2Q6XYB7 198 aa9.78□□□□□ -0.84
CDC42SE1-204ENST00000483763 MIER3Q7Z3K6 550 aa9.78□□□□□ -0.84
CDC42SE1-204ENST00000483763 SAMD3Q8N6K7 520 aa9.78□□□□□ -0.84
CDC42SE1-204ENST00000483763 TSC1Q92574 1164 aa9.78□□□□□ -0.84
CDC42SE1-204ENST00000483763 ZNF592Q92610 1267 aa9.78□□□□□ -0.84
CDC42SE1-204ENST00000483763 NACC1Q96RE7 527 aa9.78□□□□□ -0.84
CDC42SE1-204ENST00000483763 TTYH3Q9C0H2 523 aa9.78□□□□□ -0.84
CDC42SE1-204ENST00000483763 PPP2R2CQ9Y2T4 447 aa9.78□□□□□ -0.84
CDC42SE1-204ENST00000483763 SAMM50Q9Y512 469 aa9.78□□□□□ -0.84
CDC42SE1-204ENST00000483763 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.78□□□□□ -0.84
CDC42SE1-204ENST00000483763 PAPPA2Q9BXP8 1791 aa9.78□□□□□ -0.84
CDC42SE1-204ENST00000483763 OTOFQ9HC10 1997 aa9.78□□□□□ -0.84
CDC42SE1-204ENST00000483763 NMT1P30419 496 aaKnown RBP9.78□□□□□ -0.84
CDC42SE1-204ENST00000483763 CNTN2Q02246 1040 aa9.78□□□□□ -0.84
CDC42SE1-204ENST00000483763 VWA3BQ502W6 1294 aa9.78□□□□□ -0.84
CDC42SE1-204ENST00000483763 ZC2HC1CQ53FD0 456 aaPredicted RBP9.78□□□□□ -0.84
CDC42SE1-204ENST00000483763 CYP4F22Q6NT55 531 aa9.78□□□□□ -0.84
CDC42SE1-204ENST00000483763 DAW1Q8N136 415 aa9.78□□□□□ -0.84
CDC42SE1-204ENST00000483763 CHP1Q99653 195 aa9.78□□□□□ -0.84
CDC42SE1-204ENST00000483763 NDST4Q9H3R1 872 aa9.78□□□□□ -0.84
CDC42SE1-204ENST00000483763 MRPL44Q9H9J2 332 aaKnown RBP9.78□□□□□ -0.84
CDC42SE1-204ENST00000483763 PTPRFP10586 1907 aa9.77□□□□□ -0.85
CDC42SE1-204ENST00000483763 RIOK3O14730 519 aaKnown RBP9.77□□□□□ -0.85
CDC42SE1-204ENST00000483763 NRDCO43847 1150 aa9.77□□□□□ -0.85
CDC42SE1-204ENST00000483763 P4HBP07237 508 aaKnown RBP9.77□□□□□ -0.85
CDC42SE1-204ENST00000483763 FECHP22830 423 aa9.77□□□□□ -0.85
CDC42SE1-204ENST00000483763 MKRN3Q13064 507 aaKnown RBP9.77□□□□□ -0.85
CDC42SE1-204ENST00000483763 MAPK7Q13164 816 aa9.77□□□□□ -0.85
CDC42SE1-204ENST00000483763 KNOP1Q1ED39 458 aaKnown RBP9.77□□□□□ -0.85
CDC42SE1-204ENST00000483763 UTP14CQ5TAP6 766 aaKnown RBP9.77□□□□□ -0.85
CDC42SE1-204ENST00000483763 TRIM65Q6PJ69 517 aa9.77□□□□□ -0.85
CDC42SE1-204ENST00000483763 WDR59Q6PJI9 974 aa9.77□□□□□ -0.85
CDC42SE1-204ENST00000483763 MAEAQ7L5Y9 396 aa9.77□□□□□ -0.85
CDC42SE1-204ENST00000483763 CNGA4Q8IV77 575 aa9.77□□□□□ -0.85
CDC42SE1-204ENST00000483763 FAM114A1Q8IWE2 563 aa9.77□□□□□ -0.85
CDC42SE1-204ENST00000483763 ANKRD13AQ8IZ07 590 aa9.77□□□□□ -0.85
CDC42SE1-204ENST00000483763 NSUN6Q8TEA1 469 aaKnown RBP9.77□□□□□ -0.85
CDC42SE1-204ENST00000483763 INPP4AQ96PE3 977 aaPredicted RBP9.77□□□□□ -0.85
CDC42SE1-204ENST00000483763 ACAD9Q9H845 621 aa9.77□□□□□ -0.85
CDC42SE1-204ENST00000483763 PNMA2Q9UL42 364 aa9.77□□□□□ -0.85
CDC42SE1-204ENST00000483763 UQCRHLA0A096LP55 91 aa9.77□□□□□ -0.85
CDC42SE1-204ENST00000483763 A0A0G2JLL6 359 aaPredicted RBP9.77□□□□□ -0.85
CDC42SE1-204ENST00000483763 SORBS3O60504 671 aa9.77□□□□□ -0.85
CDC42SE1-204ENST00000483763 AOC2O75106 756 aa9.77□□□□□ -0.85
CDC42SE1-204ENST00000483763 GCNT3O95395 438 aa9.77□□□□□ -0.85
CDC42SE1-204ENST00000483763 ABL1P00519 1130 aa9.77□□□□□ -0.85
CDC42SE1-204ENST00000483763 UQCRHP07919 91 aa9.77□□□□□ -0.85
CDC42SE1-204ENST00000483763 VEGFBP49765 207 aa9.77□□□□□ -0.85
CDC42SE1-204ENST00000483763 SP2Q02086 613 aa9.77□□□□□ -0.85
CDC42SE1-204ENST00000483763 PPATQ06203 517 aa9.77□□□□□ -0.85
CDC42SE1-204ENST00000483763 ADAM9Q13443 819 aa9.77□□□□□ -0.85
CDC42SE1-204ENST00000483763 MOGSQ13724 837 aa9.77□□□□□ -0.85
CDC42SE1-204ENST00000483763 FOXR2Q6PJQ5 311 aa9.77□□□□□ -0.85
CDC42SE1-204ENST00000483763 GADL1Q6ZQY3 521 aa9.77□□□□□ -0.85
CDC42SE1-204ENST00000483763 PRRT2Q7Z6L0 340 aaPredicted RBP9.77□□□□□ -0.85
CDC42SE1-204ENST00000483763 KCTD17Q8N5Z5 321 aa9.77□□□□□ -0.85
CDC42SE1-204ENST00000483763 MYCT1Q8N699 235 aa9.77□□□□□ -0.85
CDC42SE1-204ENST00000483763 ERGIC2Q96RQ1 377 aa9.77□□□□□ -0.85
CDC42SE1-204ENST00000483763 ZSWIM4Q9H7M6 989 aa9.77□□□□□ -0.85
CDC42SE1-204ENST00000483763 TXNRD2Q9NNW7 524 aa9.77□□□□□ -0.85
CDC42SE1-204ENST00000483763 OLFML3Q9NRN5 406 aa9.77□□□□□ -0.85
CDC42SE1-204ENST00000483763 TBC1D22BQ9NU19 505 aa9.77□□□□□ -0.85
CDC42SE1-204ENST00000483763 SIK3Q9Y2K2 1263 aa9.77□□□□□ -0.85
CDC42SE1-204ENST00000483763 COL4A3BPQ9Y5P4 624 aa9.77□□□□□ -0.85
CDC42SE1-204ENST00000483763 MYPNQ86TC9 1320 aa9.76□□□□□ -0.85
CDC42SE1-204ENST00000483763 SPDYE5A6NIY4 337 aa9.76□□□□□ -0.85
CDC42SE1-204ENST00000483763 TMEM88BA6NKF7 163 aa9.76□□□□□ -0.85
CDC42SE1-204ENST00000483763 TGFB1I1O43294 461 aa9.76□□□□□ -0.85
CDC42SE1-204ENST00000483763 TBCAO75347 108 aaKnown RBP9.76□□□□□ -0.85
CDC42SE1-204ENST00000483763 CHRM1P11229 460 aaPredicted RBP9.76□□□□□ -0.85
CDC42SE1-204ENST00000483763 KCNA2P16389 499 aa9.76□□□□□ -0.85
CDC42SE1-204ENST00000483763 NR2F2P24468 414 aa9.76□□□□□ -0.85
CDC42SE1-204ENST00000483763 HOXA7P31268 230 aaPredicted RBP9.76□□□□□ -0.85
CDC42SE1-204ENST00000483763 QARSP47897 775 aaKnown RBP9.76□□□□□ -0.85
CDC42SE1-204ENST00000483763 RARRES1P49788 294 aa9.76□□□□□ -0.85
CDC42SE1-204ENST00000483763 ZNF131P52739 623 aa9.76□□□□□ -0.85
CDC42SE1-204ENST00000483763 TERF1P54274 439 aa9.76□□□□□ -0.85
CDC42SE1-204ENST00000483763 APBA1Q02410 837 aa9.76□□□□□ -0.85
CDC42SE1-204ENST00000483763 MAN2A1Q16706 1144 aa9.76□□□□□ -0.85
CDC42SE1-204ENST00000483763 PADI6Q6TGC4 694 aa9.76□□□□□ -0.85
CDC42SE1-204ENST00000483763 SYT10Q6XYQ8 523 aa9.76□□□□□ -0.85
CDC42SE1-204ENST00000483763 ARMC9Q7Z3E5 817 aa9.76□□□□□ -0.85
CDC42SE1-204ENST00000483763 ERO1BQ86YB8 467 aa9.76□□□□□ -0.85
CDC42SE1-204ENST00000483763 ZC3H3Q8IXZ2 948 aaKnown RBP9.76□□□□□ -0.85
CDC42SE1-204ENST00000483763 SMCR8Q8TEV9 937 aaPredicted RBP9.76□□□□□ -0.85
CDC42SE1-204ENST00000483763 PRIMPOLQ96LW4 560 aa9.76□□□□□ -0.85
CDC42SE1-204ENST00000483763 TSG101Q99816 390 aa9.76□□□□□ -0.85
CDC42SE1-204ENST00000483763 IRX2Q9BZI1 471 aaPredicted RBP9.76□□□□□ -0.85
CDC42SE1-204ENST00000483763 PARVGQ9HBI0 331 aa9.76□□□□□ -0.85
CDC42SE1-204ENST00000483763 TSKSQ9UJT2 592 aa9.76□□□□□ -0.85
CDC42SE1-204ENST00000483763 CAPN11Q9UMQ6 739 aa9.76□□□□□ -0.85
CDC42SE1-204ENST00000483763 TRAF3IP3Q9Y228 551 aa9.76□□□□□ -0.85
CDC42SE1-204ENST00000483763 TRIM21P19474 475 aaKnown RBP9.75□□□□□ -0.85
CDC42SE1-204ENST00000483763 MUTP22033 750 aa9.75□□□□□ -0.85
CDC42SE1-204ENST00000483763 CCND2P30279 289 aa9.75□□□□□ -0.85
CDC42SE1-204ENST00000483763 GJA5P36382 358 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms