RNA–Protein interactions for RNA: ENST00000483148.5

APTX-226, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,764 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-226ENST00000483148 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.12□□□□□ -0.63
APTX-226ENST00000483148 HERC5Q9UII4 1024 aaKnown RBP11.12□□□□□ -0.63
APTX-226ENST00000483148 SERPINB13Q9UIV8 391 aa11.12□□□□□ -0.63
APTX-226ENST00000483148 ANAPC4Q9UJX5 808 aa11.12□□□□□ -0.63
APTX-226ENST00000483148 CEP131Q9UPN4 1083 aa11.12□□□□□ -0.63
APTX-226ENST00000483148 SH2B2O14492 632 aaPredicted RBP11.11□□□□□ -0.63
APTX-226ENST00000483148 ACTN4O43707 911 aaKnown RBP11.11□□□□□ -0.63
APTX-226ENST00000483148 PPFIA3O75145 1194 aa11.11□□□□□ -0.63
APTX-226ENST00000483148 DNAJC8O75937 253 aaPredicted RBP11.11□□□□□ -0.63
APTX-226ENST00000483148 ABL1P00519 1130 aa11.11□□□□□ -0.63
APTX-226ENST00000483148 KRT9P35527 623 aa11.11□□□□□ -0.63
APTX-226ENST00000483148 RWDD2BP57060 319 aa11.11□□□□□ -0.63
APTX-226ENST00000483148 SH3D19Q5HYK7 790 aa11.11□□□□□ -0.63
APTX-226ENST00000483148 CRELD2Q6UXH1 353 aaPredicted RBP11.11□□□□□ -0.63
APTX-226ENST00000483148 CEP57Q86XR8 500 aa11.11□□□□□ -0.63
APTX-226ENST00000483148 MB21D2Q8IYB1 491 aaPredicted RBP11.11□□□□□ -0.63
APTX-226ENST00000483148 GSPT2Q8IYD1 628 aaKnown RBP11.11□□□□□ -0.63
APTX-226ENST00000483148 NCOA7Q8NI08 942 aa11.11□□□□□ -0.63
APTX-226ENST00000483148 ZNF483Q8TF39 744 aaPredicted RBP11.11□□□□□ -0.63
APTX-226ENST00000483148 USP6NLQ92738 828 aa11.11□□□□□ -0.63
APTX-226ENST00000483148 ARL8AQ96BM9 186 aa11.11□□□□□ -0.63
APTX-226ENST00000483148 FAM210AQ96ND0 272 aa11.11□□□□□ -0.63
APTX-226ENST00000483148 GSDMAQ96QA5 445 aa11.11□□□□□ -0.63
APTX-226ENST00000483148 CDX2Q99626 313 aaPredicted RBP11.11□□□□□ -0.63
APTX-226ENST00000483148 PRDM6Q9NQX0 595 aa11.11□□□□□ -0.63
APTX-226ENST00000483148 ETAA1Q9NY74 926 aa11.11□□□□□ -0.63
APTX-226ENST00000483148 FBXO2Q9UK22 296 aaPredicted RBP11.11□□□□□ -0.63
APTX-226ENST00000483148 TPX2Q9ULW0 747 aaKnown RBP11.11□□□□□ -0.63
APTX-226ENST00000483148 REXO2Q9Y3B8 237 aaKnown RBP11.11□□□□□ -0.63
APTX-226ENST00000483148 STK36Q9NRP7 1315 aa11.11□□□□□ -0.63
APTX-226ENST00000483148 MINDY4BA8MYZ0 360 aa11.11□□□□□ -0.63
APTX-226ENST00000483148 N4BP3O15049 544 aa11.11□□□□□ -0.63
APTX-226ENST00000483148 POLR2DO15514 142 aaKnown RBP11.11□□□□□ -0.63
APTX-226ENST00000483148 MGRN1O60291 552 aa11.11□□□□□ -0.63
APTX-226ENST00000483148 XRCC5P13010 732 aaKnown RBP11.11□□□□□ -0.63
APTX-226ENST00000483148 NR1D1P20393 614 aa11.11□□□□□ -0.63
APTX-226ENST00000483148 JAG1P78504 1218 aa11.11□□□□□ -0.63
APTX-226ENST00000483148 IFT88Q13099 833 aa11.11□□□□□ -0.63
APTX-226ENST00000483148 NAA25Q14CX7 972 aa11.11□□□□□ -0.63
APTX-226ENST00000483148 CFAP58Q5T655 872 aa11.11□□□□□ -0.63
APTX-226ENST00000483148 C16orf86Q6ZW13 317 aa11.11□□□□□ -0.63
APTX-226ENST00000483148 CCDC170Q8IYT3 715 aa11.11□□□□□ -0.63
APTX-226ENST00000483148 CCDC155Q8N6L0 562 aa11.11□□□□□ -0.63
APTX-226ENST00000483148 WASF1Q92558 559 aa11.11□□□□□ -0.63
APTX-226ENST00000483148 TATDN2Q93075 761 aa11.11□□□□□ -0.63
APTX-226ENST00000483148 RNPC3Q96LT9 517 aaKnown RBP11.11□□□□□ -0.63
APTX-226ENST00000483148 PURBQ96QR8 312 aaKnown RBP11.11□□□□□ -0.63
APTX-226ENST00000483148 RABEP2Q9H5N1 569 aa11.11□□□□□ -0.63
APTX-226ENST00000483148 SLC24A3Q9HC58 644 aa11.11□□□□□ -0.63
APTX-226ENST00000483148 RBPJLQ9UBG7 517 aa11.11□□□□□ -0.63
APTX-226ENST00000483148 HDAC6Q9UBN7 1215 aa11.11□□□□□ -0.63
APTX-226ENST00000483148 A0A1W2PQC6 194 aa11.1□□□□□ -0.63
APTX-226ENST00000483148 LIN7AO14910 233 aaPredicted RBP11.1□□□□□ -0.63
APTX-226ENST00000483148 FGRP09769 529 aa11.1□□□□□ -0.63
APTX-226ENST00000483148 SHMT1P34896 483 aa11.1□□□□□ -0.63
APTX-226ENST00000483148 CAP2P40123 477 aa11.1□□□□□ -0.63
APTX-226ENST00000483148 COPB1P53618 953 aaKnown RBP11.1□□□□□ -0.63
APTX-226ENST00000483148 RBBP5Q15291 538 aaKnown RBP11.1□□□□□ -0.63
APTX-226ENST00000483148 RILPL1Q5EBL4 403 aa11.1□□□□□ -0.63
APTX-226ENST00000483148 SPECC1Q5M775 1068 aa11.1□□□□□ -0.63
APTX-226ENST00000483148 TATDN1Q6P1N9 297 aa11.1□□□□□ -0.63
APTX-226ENST00000483148 FAM228AQ86W67 206 aa11.1□□□□□ -0.63
APTX-226ENST00000483148 STK11IPQ8N1F8 1099 aa11.1□□□□□ -0.63
APTX-226ENST00000483148 SLC44A5Q8NCS7 719 aa11.1□□□□□ -0.63
APTX-226ENST00000483148 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.1□□□□□ -0.63
APTX-226ENST00000483148 CCDC47Q96A33 483 aaKnown RBP11.1□□□□□ -0.63
APTX-226ENST00000483148 DYNLL2Q96FJ2 89 aa11.1□□□□□ -0.63
APTX-226ENST00000483148 CAPZA3Q96KX2 299 aa11.1□□□□□ -0.63
APTX-226ENST00000483148 GDAP1L1Q96MZ0 367 aa11.1□□□□□ -0.63
APTX-226ENST00000483148 ZIM3Q96PE6 472 aa11.1□□□□□ -0.63
APTX-226ENST00000483148 DNAJC7Q99615 494 aa11.1□□□□□ -0.63
APTX-226ENST00000483148 NUDT12Q9BQG2 462 aa11.1□□□□□ -0.63
APTX-226ENST00000483148 SEMA6BQ9H3T3 888 aa11.1□□□□□ -0.63
APTX-226ENST00000483148 SWAP70Q9UH65 585 aa11.1□□□□□ -0.63
APTX-226ENST00000483148 SRPRBQ9Y5M8 271 aaKnown RBP11.1□□□□□ -0.63
APTX-226ENST00000483148 LOC285556D6RIA3 1793 aa11.09□□□□□ -0.63
APTX-226ENST00000483148 C5orf60A6NFR6 353 aa11.09□□□□□ -0.63
APTX-226ENST00000483148 USP17L5A8MUK1 530 aa11.09□□□□□ -0.63
APTX-226ENST00000483148 ENC1O14682 589 aa11.09□□□□□ -0.63
APTX-226ENST00000483148 ZNF213O14771 459 aa11.09□□□□□ -0.63
APTX-226ENST00000483148 ZMYND10O75800 440 aa11.09□□□□□ -0.63
APTX-226ENST00000483148 IPO7O95373 1038 aaKnown RBP11.09□□□□□ -0.63
APTX-226ENST00000483148 TCP1P17987 556 aaKnown RBP11.09□□□□□ -0.63
APTX-226ENST00000483148 GCKP35557 465 aa11.09□□□□□ -0.63
APTX-226ENST00000483148 CDK8P49336 464 aa11.09□□□□□ -0.63
APTX-226ENST00000483148 CCNHP51946 323 aaPredicted RBP11.09□□□□□ -0.63
APTX-226ENST00000483148 VAV2P52735 878 aa11.09□□□□□ -0.63
APTX-226ENST00000483148 HAND2P61296 217 aa11.09□□□□□ -0.63
APTX-226ENST00000483148 HERVK_113P62684 666 aa11.09□□□□□ -0.63
APTX-226ENST00000483148 C2orf54Q08AI8 447 aa11.09□□□□□ -0.63
APTX-226ENST00000483148 TRAF1Q13077 416 aa11.09□□□□□ -0.63
APTX-226ENST00000483148 PABPC4Q13310 644 aaKnown RBP eCLIP11.09□□□□□ -0.63
APTX-226ENST00000483148 RIPK1Q13546 671 aa11.09□□□□□ -0.63
APTX-226ENST00000483148 KRT31Q15323 416 aa11.09□□□□□ -0.63
APTX-226ENST00000483148 SHROOM1Q2M3G4 852 aaPredicted RBP11.09□□□□□ -0.63
APTX-226ENST00000483148 ANKRD20A8PQ5CZ79 823 aa11.09□□□□□ -0.63
APTX-226ENST00000483148 MORN1Q5T089 497 aa11.09□□□□□ -0.63
APTX-226ENST00000483148 CDCA2Q69YH5 1023 aaPredicted RBP11.09□□□□□ -0.63
APTX-226ENST00000483148 CHST3Q7LGC8 479 aa11.09□□□□□ -0.63
APTX-226ENST00000483148 SH3RF1Q7Z6J0 888 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms