RNA–Protein interactions for RNA: ENST00000482878.5

CCDC78-213, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-213ENST00000482878 TRMT1LQ7Z2T5 733 aaKnown RBP13.56□□□□□ -0.24
CCDC78-213ENST00000482878 AMIGO3Q86WK7 504 aa13.56□□□□□ -0.24
CCDC78-213ENST00000482878 CCDC26Q8TAB7 109 aa13.56□□□□□ -0.24
CCDC78-213ENST00000482878 LSM14BQ9BX40 385 aaKnown RBP13.56□□□□□ -0.24
CCDC78-213ENST00000482878 SERPING1P05155 500 aa13.55□□□□□ -0.24
CCDC78-213ENST00000482878 SCTRP47872 440 aa13.55□□□□□ -0.24
CCDC78-213ENST00000482878 TNNI2P48788 182 aa13.55□□□□□ -0.24
CCDC78-213ENST00000482878 RNASE9P60153 205 aaKnown RBP13.55□□□□□ -0.24
CCDC78-213ENST00000482878 TRADDQ15628 312 aa13.55□□□□□ -0.24
CCDC78-213ENST00000482878 ENOX2Q16206 610 aaKnown RBP13.55□□□□□ -0.24
CCDC78-213ENST00000482878 PROM2Q8N271 834 aa13.55□□□□□ -0.24
CCDC78-213ENST00000482878 TBC1D5Q92609 795 aa13.55□□□□□ -0.24
CCDC78-213ENST00000482878 PACSIN1Q9BY11 444 aa13.55□□□□□ -0.24
CCDC78-213ENST00000482878 RAB34Q9BZG1 259 aa13.55□□□□□ -0.24
CCDC78-213ENST00000482878 MYH1P12882 1939 aa13.55□□□□□ -0.24
CCDC78-213ENST00000482878 CNTNAP4Q9C0A0 1308 aa13.55□□□□□ -0.24
CCDC78-213ENST00000482878 HLTFQ14527 1009 aaKnown RBP eCLIP13.55□□□□□ -0.24
CCDC78-213ENST00000482878 NAB2Q15742 525 aa13.55□□□□□ -0.24
CCDC78-213ENST00000482878 UBE2SQ16763 222 aa13.55□□□□□ -0.24
CCDC78-213ENST00000482878 ANKRD20A8PQ5CZ79 823 aa13.55□□□□□ -0.24
CCDC78-213ENST00000482878 THEMIS2Q5TEJ8 643 aa13.55□□□□□ -0.24
CCDC78-213ENST00000482878 IFT20Q8IY31 132 aa13.55□□□□□ -0.24
CCDC78-213ENST00000482878 IQCKQ8N0W5 287 aa13.55□□□□□ -0.24
CCDC78-213ENST00000482878 HVCN1Q96D96 273 aa13.55□□□□□ -0.24
CCDC78-213ENST00000482878 A0A087X0T9 212 aa13.55□□□□□ -0.24
CCDC78-213ENST00000482878 ZNF233A6NK53 670 aa13.55□□□□□ -0.24
CCDC78-213ENST00000482878 FAM228BP0C875 321 aa13.55□□□□□ -0.24
CCDC78-213ENST00000482878 GTF2IP78347 998 aa13.55□□□□□ -0.24
CCDC78-213ENST00000482878 CLEC10AQ8IUN9 316 aa13.55□□□□□ -0.24
CCDC78-213ENST00000482878 NELFCDQ8IXH7 590 aa13.55□□□□□ -0.24
CCDC78-213ENST00000482878 LRRC47Q8N1G4 583 aaKnown RBP13.55□□□□□ -0.24
CCDC78-213ENST00000482878 ARFGAP2Q8N6H7 521 aa13.55□□□□□ -0.24
CCDC78-213ENST00000482878 HAS1Q92839 578 aa13.55□□□□□ -0.24
CCDC78-213ENST00000482878 KRT12Q99456 494 aa13.55□□□□□ -0.24
CCDC78-213ENST00000482878 OSBPL7Q9BZF2 842 aa13.55□□□□□ -0.24
CCDC78-213ENST00000482878 TSKSQ9UJT2 592 aa13.55□□□□□ -0.24
CCDC78-213ENST00000482878 LEMD3Q9Y2U8 911 aa13.55□□□□□ -0.24
CCDC78-213ENST00000482878 L3MBTL1Q9Y468 752 aa13.55□□□□□ -0.24
CCDC78-213ENST00000482878 ATP6V0A2Q9Y487 856 aa13.55□□□□□ -0.24
CCDC78-213ENST00000482878 CCDC88AQ3V6T2 1871 aa13.55□□□□□ -0.24
CCDC78-213ENST00000482878 TCP10Q12799 353 aa13.54□□□□□ -0.24
CCDC78-213ENST00000482878 FAM26FQ5R3K3 315 aa13.54□□□□□ -0.24
CCDC78-213ENST00000482878 NUCKS1Q9H1E3 243 aaKnown RBP13.54□□□□□ -0.24
CCDC78-213ENST00000482878 PANK4Q9NVE7 773 aa13.54□□□□□ -0.24
CCDC78-213ENST00000482878 GPR75-ASB3A0A0A6YYF3 556 aa13.54□□□□□ -0.24
CCDC78-213ENST00000482878 GMNCA6NCL1 334 aa13.54□□□□□ -0.24
CCDC78-213ENST00000482878 MYBL1P10243 752 aa13.54□□□□□ -0.24
CCDC78-213ENST00000482878 NOVP48745 357 aa13.54□□□□□ -0.24
CCDC78-213ENST00000482878 CACNB1Q02641 598 aaPredicted RBP13.54□□□□□ -0.24
CCDC78-213ENST00000482878 TLDC1Q6P9B6 456 aa13.54□□□□□ -0.24
CCDC78-213ENST00000482878 ZNF804AQ7Z570 1209 aa13.54□□□□□ -0.24
CCDC78-213ENST00000482878 PIK3R5Q8WYR1 880 aa13.54□□□□□ -0.24
CCDC78-213ENST00000482878 SYN2Q92777 582 aaPredicted RBP13.54□□□□□ -0.24
CCDC78-213ENST00000482878 HOOK2Q96ED9 719 aa13.54□□□□□ -0.24
CCDC78-213ENST00000482878 FAM167BQ9BTA0 163 aa13.54□□□□□ -0.24
CCDC78-213ENST00000482878 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.54□□□□□ -0.24
CCDC78-213ENST00000482878 GPCPD1Q9NPB8 672 aa13.54□□□□□ -0.24
CCDC78-213ENST00000482878 RNF14Q9UBS8 474 aa13.54□□□□□ -0.24
CCDC78-213ENST00000482878 ADAMTS1Q9UHI8 967 aa13.54□□□□□ -0.24
CCDC78-213ENST00000482878 COL5A3P25940 1745 aaPredicted RBP13.54□□□□□ -0.24
CCDC78-213ENST00000482878 SPATA31A5Q5VU36 1347 aa13.54□□□□□ -0.24
CCDC78-213ENST00000482878 SPATA31A7Q8IWB4 1347 aa13.54□□□□□ -0.24
CCDC78-213ENST00000482878 ATP6V1G2O95670 118 aa13.54□□□□□ -0.24
CCDC78-213ENST00000482878 RHBDL3P58872 404 aa13.54□□□□□ -0.24
CCDC78-213ENST00000482878 SLC18A3Q16572 532 aa13.54□□□□□ -0.24
CCDC78-213ENST00000482878 MEI1Q5TIA1 1274 aa13.54□□□□□ -0.24
CCDC78-213ENST00000482878 CASKIN2Q8WXE0 1202 aa13.54□□□□□ -0.24
CCDC78-213ENST00000482878 ATP6V1G3Q96LB4 118 aa13.54□□□□□ -0.24
CCDC78-213ENST00000482878 BATF3Q9NR55 127 aa13.54□□□□□ -0.24
CCDC78-213ENST00000482878 TRPC6Q9Y210 931 aa13.54□□□□□ -0.24
CCDC78-213ENST00000482878 NPHP3-ACAD11A0A0J9YXS1 232 aa13.53□□□□□ -0.24
CCDC78-213ENST00000482878 TMOD1P28289 359 aa13.53□□□□□ -0.24
CCDC78-213ENST00000482878 RAPGEF1Q13905 1077 aa13.53□□□□□ -0.24
CCDC78-213ENST00000482878 KIAA0753Q2KHM9 967 aa13.53□□□□□ -0.24
CCDC78-213ENST00000482878 FOXR2Q6PJQ5 311 aa13.53□□□□□ -0.24
CCDC78-213ENST00000482878 FAM133AQ8N9E0 248 aa13.53□□□□□ -0.24
CCDC78-213ENST00000482878 CUL5Q93034 780 aa13.53□□□□□ -0.24
CCDC78-213ENST00000482878 INPP4AQ96PE3 977 aaPredicted RBP13.53□□□□□ -0.24
CCDC78-213ENST00000482878 LRRC27Q9C0I9 530 aa13.53□□□□□ -0.24
CCDC78-213ENST00000482878 DDX25Q9UHL0 483 aaKnown RBP13.53□□□□□ -0.24
CCDC78-213ENST00000482878 PCDHGC5Q9Y5F6 944 aa13.53□□□□□ -0.24
CCDC78-213ENST00000482878 E9PMD0 336 aa13.53□□□□□ -0.24
CCDC78-213ENST00000482878 RGL2O15211 777 aa13.53□□□□□ -0.24
CCDC78-213ENST00000482878 PPP1R11O60927 126 aaPredicted RBP13.53□□□□□ -0.24
CCDC78-213ENST00000482878 RPS6KA4O75676 772 aa13.53□□□□□ -0.24
CCDC78-213ENST00000482878 MFSD14BQ5SR56 506 aa13.53□□□□□ -0.24
CCDC78-213ENST00000482878 ARHGAP27Q6ZUM4 889 aa13.53□□□□□ -0.24
CCDC78-213ENST00000482878 TBC1D1Q86TI0 1168 aaPredicted RBP13.53□□□□□ -0.24
CCDC78-213ENST00000482878 TRIM59Q8IWR1 403 aa13.53□□□□□ -0.24
CCDC78-213ENST00000482878 CCDC63Q8NA47 563 aa13.53□□□□□ -0.24
CCDC78-213ENST00000482878 SEC16BQ96JE7 1060 aa13.53□□□□□ -0.24
CCDC78-213ENST00000482878 MXD3Q9BW11 206 aa13.53□□□□□ -0.24
CCDC78-213ENST00000482878 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.53□□□□□ -0.24
CCDC78-213ENST00000482878 MYH10P35580 1976 aa13.53□□□□□ -0.24
CCDC78-213ENST00000482878 DDX60LQ5H9U9 1706 aaKnown RBP13.52□□□□□ -0.24
CCDC78-213ENST00000482878 ANP32DO95626 131 aa13.52□□□□□ -0.24
CCDC78-213ENST00000482878 SLURP2P0DP57 97 aa13.52□□□□□ -0.24
CCDC78-213ENST00000482878 PAK2Q13177 524 aa13.52□□□□□ -0.24
CCDC78-213ENST00000482878 GRAPQ13588 217 aa13.52□□□□□ -0.24
CCDC78-213ENST00000482878 BZW1Q7L1Q6 419 aaKnown RBP13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms