RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 ZNF174Q15697 407 aa18.66■□□□□ 0.58
HMGN1-214ENST00000482733 HABP4Q5JVS0 413 aaKnown RBP18.66■□□□□ 0.58
HMGN1-214ENST00000482733 LRRC8DQ7L1W4 858 aa18.66■□□□□ 0.58
HMGN1-214ENST00000482733 RPAINQ86UA6 219 aa18.66■□□□□ 0.58
HMGN1-214ENST00000482733 RSPH3Q86UC2 560 aa18.66■□□□□ 0.58
HMGN1-214ENST00000482733 SCLYQ96I15 445 aa18.66■□□□□ 0.58
HMGN1-214ENST00000482733 TTC12Q9H892 705 aaPredicted RBP18.66■□□□□ 0.58
HMGN1-214ENST00000482733 OATP04181 439 aa18.65■□□□□ 0.58
HMGN1-214ENST00000482733 P4HBP07237 508 aaKnown RBP18.65■□□□□ 0.58
HMGN1-214ENST00000482733 OR52Z1P0C646 297 aa18.65■□□□□ 0.58
HMGN1-214ENST00000482733 TXKP42681 527 aa18.65■□□□□ 0.58
HMGN1-214ENST00000482733 EPHB4P54760 987 aa18.65■□□□□ 0.58
HMGN1-214ENST00000482733 PSMC5P62195 406 aa18.65■□□□□ 0.58
HMGN1-214ENST00000482733 MARCH8Q5T0T0 291 aa18.65■□□□□ 0.58
HMGN1-214ENST00000482733 WNT8BQ93098 351 aa18.65■□□□□ 0.58
HMGN1-214ENST00000482733 PCDHA2Q9Y5H9 948 aa18.65■□□□□ 0.58
HMGN1-214ENST00000482733 RSPH10B2B2RC85 870 aa18.64■□□□□ 0.57
HMGN1-214ENST00000482733 EML1O00423 815 aa18.64■□□□□ 0.57
HMGN1-214ENST00000482733 HSP90AA1P07900 732 aaKnown RBP18.64■□□□□ 0.57
HMGN1-214ENST00000482733 RSPH10BP0C881 870 aa18.64■□□□□ 0.57
HMGN1-214ENST00000482733 QARSP47897 775 aaKnown RBP18.64■□□□□ 0.57
HMGN1-214ENST00000482733 TOB1P50616 345 aaPredicted RBP18.64■□□□□ 0.57
HMGN1-214ENST00000482733 PRKCEQ02156 737 aa18.64■□□□□ 0.57
HMGN1-214ENST00000482733 SPIRE1Q08AE8 756 aa18.64■□□□□ 0.57
HMGN1-214ENST00000482733 XKR3Q5GH77 459 aa18.64■□□□□ 0.57
HMGN1-214ENST00000482733 ZNF618Q5T7W0 954 aa18.64■□□□□ 0.57
HMGN1-214ENST00000482733 NCAPH2Q6IBW4 605 aa18.64■□□□□ 0.57
HMGN1-214ENST00000482733 BRAPQ7Z569 592 aa18.64■□□□□ 0.57
HMGN1-214ENST00000482733 TMEM60Q9H2L4 133 aa18.64■□□□□ 0.57
HMGN1-214ENST00000482733 RANBP2P49792 3224 aaKnown RBP18.63■□□□□ 0.57
HMGN1-214ENST00000482733 VPS37CA5D8V6 355 aaPredicted RBP18.63■□□□□ 0.57
HMGN1-214ENST00000482733 LAD1O00515 517 aa18.63■□□□□ 0.57
HMGN1-214ENST00000482733 ZNF862O60290 1169 aa18.63■□□□□ 0.57
HMGN1-214ENST00000482733 FGBP02675 491 aa18.63■□□□□ 0.57
HMGN1-214ENST00000482733 PDIA4P13667 645 aaKnown RBP18.63■□□□□ 0.57
HMGN1-214ENST00000482733 SYT1P21579 422 aa18.63■□□□□ 0.57
HMGN1-214ENST00000482733 SHHQ15465 462 aa18.63■□□□□ 0.57
HMGN1-214ENST00000482733 UGCGQ16739 394 aa18.63■□□□□ 0.57
HMGN1-214ENST00000482733 TMEM240Q5SV17 173 aa18.63■□□□□ 0.57
HMGN1-214ENST00000482733 MTHFD1LQ6UB35 978 aa18.63■□□□□ 0.57
HMGN1-214ENST00000482733 C16orf59Q7L2K0 433 aa18.63■□□□□ 0.57
HMGN1-214ENST00000482733 NEK9Q8TD19 979 aa18.63■□□□□ 0.57
HMGN1-214ENST00000482733 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.63■□□□□ 0.574e-7■■■□□ 17.3
HMGN1-214ENST00000482733 MTIF3Q9H2K0 278 aaKnown RBP18.63■□□□□ 0.57
HMGN1-214ENST00000482733 SMIM35A0A1B0GVV1 85 aa18.62■□□□□ 0.57
HMGN1-214ENST00000482733 MAGEB2O15479 319 aa18.62■□□□□ 0.57
HMGN1-214ENST00000482733 ACRP10323 421 aa18.62■□□□□ 0.57
HMGN1-214ENST00000482733 ACTN1P12814 892 aa18.62■□□□□ 0.57
HMGN1-214ENST00000482733 KLRC1P26715 233 aa18.62■□□□□ 0.57
HMGN1-214ENST00000482733 TMEM266Q2M3C6 531 aa18.62■□□□□ 0.57
HMGN1-214ENST00000482733 LRIT3Q3SXY7 679 aa18.62■□□□□ 0.57
HMGN1-214ENST00000482733 FAM26DQ5JW98 314 aa18.62■□□□□ 0.57
HMGN1-214ENST00000482733 C9orf50Q5SZB4 431 aa18.62■□□□□ 0.57
HMGN1-214ENST00000482733 TRAF7Q6Q0C0 670 aa18.62■□□□□ 0.57
HMGN1-214ENST00000482733 RUFY4Q6ZNE9 571 aa18.62■□□□□ 0.57
HMGN1-214ENST00000482733 NME8Q8N427 588 aa18.62■□□□□ 0.57
HMGN1-214ENST00000482733 BANK1Q8NDB2 785 aa18.62■□□□□ 0.57
HMGN1-214ENST00000482733 TRAPPC12Q8WVT3 735 aa18.62■□□□□ 0.57
HMGN1-214ENST00000482733 RNPC3Q96LT9 517 aaKnown RBP18.62■□□□□ 0.57
HMGN1-214ENST00000482733 NIFKQ9BYG3 293 aaKnown RBP18.62■□□□□ 0.57
HMGN1-214ENST00000482733 ZSWIM4Q9H7M6 989 aa18.62■□□□□ 0.57
HMGN1-214ENST00000482733 FOXD4L1Q9NU39 408 aa18.62■□□□□ 0.57
HMGN1-214ENST00000482733 PCDHB6Q9Y5E3 794 aa18.62■□□□□ 0.57
HMGN1-214ENST00000482733 ZBTB42B2RXF5 422 aa18.61■□□□□ 0.57
HMGN1-214ENST00000482733 CXCL10P02778 98 aa18.61■□□□□ 0.57
HMGN1-214ENST00000482733 NBR1Q14596 966 aa18.61■□□□□ 0.57
HMGN1-214ENST00000482733 IER5Q5VY09 327 aa18.61■□□□□ 0.57
HMGN1-214ENST00000482733 ZNF365Q70YC5 407 aa18.61■□□□□ 0.57
HMGN1-214ENST00000482733 TRMT1LQ7Z2T5 733 aaKnown RBP18.61■□□□□ 0.57
HMGN1-214ENST00000482733 DEFB128Q7Z7B8 93 aa18.61■□□□□ 0.57
HMGN1-214ENST00000482733 C4orf19Q8IY42 314 aa18.61■□□□□ 0.57
HMGN1-214ENST00000482733 C4orf32Q8N8J7 132 aa18.61■□□□□ 0.57
HMGN1-214ENST00000482733 DNAJB3Q8WWF6 145 aa18.61■□□□□ 0.57
HMGN1-214ENST00000482733 HERVK_113Q902F9 699 aa18.61■□□□□ 0.57
HMGN1-214ENST00000482733 FTOQ9C0B1 505 aaKnown RBP eCLIP18.61■□□□□ 0.577e-6■■□□□ 12.9
HMGN1-214ENST00000482733 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.61■□□□□ 0.57
HMGN1-214ENST00000482733 SEPT9Q9UHD8 586 aaPredicted RBP18.61■□□□□ 0.57
HMGN1-214ENST00000482733 PPME1Q9Y570 386 aa18.61■□□□□ 0.57
HMGN1-214ENST00000482733 DDX11L8A8MPP1 907 aa18.6■□□□□ 0.57
HMGN1-214ENST00000482733 C22orf31O95567 290 aa18.6■□□□□ 0.57
HMGN1-214ENST00000482733 PRPHP41219 470 aa18.6■□□□□ 0.57
HMGN1-214ENST00000482733 TECP42680 631 aa18.6■□□□□ 0.57
HMGN1-214ENST00000482733 PTGDRQ13258 359 aa18.6■□□□□ 0.57
HMGN1-214ENST00000482733 ERMNQ8TAM6 284 aa18.6■□□□□ 0.57
HMGN1-214ENST00000482733 DYDC2Q96IM9 177 aa18.6■□□□□ 0.57
HMGN1-214ENST00000482733 HSD17B14Q9BPX1 270 aa18.6■□□□□ 0.57
HMGN1-214ENST00000482733 EIF2AK1Q9BQI3 630 aaKnown RBP18.6■□□□□ 0.57
HMGN1-214ENST00000482733 LXNQ9BS40 222 aa18.6■□□□□ 0.57
HMGN1-214ENST00000482733 RAB34Q9BZG1 259 aa18.6■□□□□ 0.57
HMGN1-214ENST00000482733 FAM49AQ9H0Q0 323 aaPredicted RBP18.6■□□□□ 0.57
HMGN1-214ENST00000482733 STK24Q9Y6E0 443 aa18.6■□□□□ 0.57
HMGN1-214ENST00000482733 M0QZ92 97 aa18.59■□□□□ 0.57
HMGN1-214ENST00000482733 STX6O43752 255 aa18.59■□□□□ 0.57
HMGN1-214ENST00000482733 NBNO60934 754 aa18.59■□□□□ 0.57
HMGN1-214ENST00000482733 SLITRK3O94933 977 aa18.59■□□□□ 0.57
HMGN1-214ENST00000482733 STBD1O95210 358 aa18.59■□□□□ 0.57
HMGN1-214ENST00000482733 CTSHP09668 335 aa18.59■□□□□ 0.57
HMGN1-214ENST00000482733 TMOD1P28289 359 aa18.59■□□□□ 0.57
HMGN1-214ENST00000482733 FXR2P51116 673 aaKnown RBP eCLIP18.59■□□□□ 0.57
HMGN1-214ENST00000482733 MRPS6P82932 125 aaKnown RBP18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms