RNA–Protein interactions for RNA: ENST00000482596.1

CHD6-209, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best)

Gene CHD6, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-209ENST00000482596 USP17L12C9JPN9 530 aa7.87□□□□□ -1.15
CHD6-209ENST00000482596 USP17L21D6R901 530 aa7.87□□□□□ -1.15
CHD6-209ENST00000482596 FSCN2O14926 492 aa7.87□□□□□ -1.15
CHD6-209ENST00000482596 DGKIO75912 1065 aa7.87□□□□□ -1.15
CHD6-209ENST00000482596 THPOP40225 353 aa7.87□□□□□ -1.15
CHD6-209ENST00000482596 GUCA2AQ02747 115 aa7.87□□□□□ -1.15
CHD6-209ENST00000482596 PDE4DQ08499 809 aa7.87□□□□□ -1.15
CHD6-209ENST00000482596 MSS51Q4VC12 460 aa7.87□□□□□ -1.15
CHD6-209ENST00000482596 PAN2Q504Q3 1202 aaKnown RBP7.87□□□□□ -1.15
CHD6-209ENST00000482596 KIAA1841Q6NSI8 718 aa7.87□□□□□ -1.15
CHD6-209ENST00000482596 DCLRE1AQ6PJP8 1040 aa7.87□□□□□ -1.15
CHD6-209ENST00000482596 LIAT1Q6ZQX7 453 aa7.87□□□□□ -1.15
CHD6-209ENST00000482596 SPIRE2Q8WWL2 714 aa7.87□□□□□ -1.15
CHD6-209ENST00000482596 EMID1Q96A84 441 aaPredicted RBP7.87□□□□□ -1.15
CHD6-209ENST00000482596 NUP88Q99567 741 aaPredicted RBP7.87□□□□□ -1.15
CHD6-209ENST00000482596 USB1Q9BQ65 265 aaKnown RBP7.87□□□□□ -1.15
CHD6-209ENST00000482596 BCO2Q9BYV7 579 aa7.87□□□□□ -1.15
CHD6-209ENST00000482596 VTA1Q9NP79 307 aa7.87□□□□□ -1.15
CHD6-209ENST00000482596 A1CFQ9NQ94 594 aaKnown RBP7.87□□□□□ -1.15
CHD6-209ENST00000482596 IFT57Q9NWB7 429 aa7.87□□□□□ -1.15
CHD6-209ENST00000482596 HMG20BQ9P0W2 317 aa7.87□□□□□ -1.15
CHD6-209ENST00000482596 HCFC2Q9Y5Z7 792 aa7.87□□□□□ -1.15
CHD6-209ENST00000482596 KPNA6O60684 536 aa7.86□□□□□ -1.15
CHD6-209ENST00000482596 BAG3O95817 575 aa7.86□□□□□ -1.15
CHD6-209ENST00000482596 CTSHP09668 335 aa7.86□□□□□ -1.15
CHD6-209ENST00000482596 SRFP11831 508 aa7.86□□□□□ -1.15
CHD6-209ENST00000482596 CCR10P46092 362 aa7.86□□□□□ -1.15
CHD6-209ENST00000482596 RFX5P48382 616 aaPredicted RBP7.86□□□□□ -1.15
CHD6-209ENST00000482596 SRSF5Q13243 272 aaKnown RBP7.86□□□□□ -1.15
CHD6-209ENST00000482596 LAPTM4AQ15012 233 aa7.86□□□□□ -1.15
CHD6-209ENST00000482596 SLC44A3Q8N4M1 653 aa7.86□□□□□ -1.15
CHD6-209ENST00000482596 CELF5Q8N6W0 485 aaKnown RBP7.86□□□□□ -1.15
CHD6-209ENST00000482596 ACSF2Q96CM8 615 aaPredicted RBP7.86□□□□□ -1.15
CHD6-209ENST00000482596 UBL7Q96S82 380 aaPredicted RBP7.86□□□□□ -1.15
CHD6-209ENST00000482596 ALG1Q9BT22 464 aa7.86□□□□□ -1.15
CHD6-209ENST00000482596 MKNK1Q9BUB5 465 aa7.86□□□□□ -1.15
CHD6-209ENST00000482596 PRDM9Q9NQV7 894 aa7.86□□□□□ -1.15
CHD6-209ENST00000482596 COG6Q9Y2V7 657 aa7.86□□□□□ -1.15
CHD6-209ENST00000482596 FRMPD2Q68DX3 1309 aaPredicted RBP7.85□□□□□ -1.15
CHD6-209ENST00000482596 ATP2A1O14983 1001 aa7.85□□□□□ -1.15
CHD6-209ENST00000482596 RAD21O60216 631 aa7.85□□□□□ -1.15
CHD6-209ENST00000482596 N4BP1O75113 896 aaKnown RBP7.85□□□□□ -1.15
CHD6-209ENST00000482596 FDX1P10109 184 aa7.85□□□□□ -1.15
CHD6-209ENST00000482596 TDGF1P13385 188 aa7.85□□□□□ -1.15
CHD6-209ENST00000482596 GATMP50440 423 aa7.85□□□□□ -1.15
CHD6-209ENST00000482596 STARD6P59095 220 aa7.85□□□□□ -1.15
CHD6-209ENST00000482596 TIMM10P62072 90 aa7.85□□□□□ -1.15
CHD6-209ENST00000482596 GNAI1P63096 354 aa7.85□□□□□ -1.15
CHD6-209ENST00000482596 ICA1Q05084 483 aa7.85□□□□□ -1.15
CHD6-209ENST00000482596 BRDTQ58F21 947 aaPredicted RBP7.85□□□□□ -1.15
CHD6-209ENST00000482596 PLA2G2CQ5R387 149 aa7.85□□□□□ -1.15
CHD6-209ENST00000482596 SH3PXD2AQ5TCZ1 1133 aa7.85□□□□□ -1.15
CHD6-209ENST00000482596 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.85□□□□□ -1.15
CHD6-209ENST00000482596 C12orf50Q8NA57 414 aaPredicted RBP7.85□□□□□ -1.15
CHD6-209ENST00000482596 CHST13Q8NET6 341 aa7.85□□□□□ -1.15
CHD6-209ENST00000482596 CASP10Q92851 521 aa7.85□□□□□ -1.15
CHD6-209ENST00000482596 SLF1Q9BQI6 1058 aa7.85□□□□□ -1.15
CHD6-209ENST00000482596 CHMP4AQ9BY43 222 aa7.85□□□□□ -1.15
CHD6-209ENST00000482596 SMOC1Q9H4F8 434 aa7.85□□□□□ -1.15
CHD6-209ENST00000482596 ARHGEF10LQ9HCE6 1279 aa7.85□□□□□ -1.15
CHD6-209ENST00000482596 PRMT8Q9NR22 394 aaPredicted RBP7.85□□□□□ -1.15
CHD6-209ENST00000482596 IGSF9Q9P2J2 1179 aa7.85□□□□□ -1.15
CHD6-209ENST00000482596 FBXO40Q9UH90 709 aa7.85□□□□□ -1.15
CHD6-209ENST00000482596 FCF1Q9Y324 198 aaKnown RBP7.85□□□□□ -1.15
CHD6-209ENST00000482596 PTPRQQ9UMZ3 2332 aa7.85□□□□□ -1.15
CHD6-209ENST00000482596 RBM47A0AV96 593 aaKnown RBP7.84□□□□□ -1.15
CHD6-209ENST00000482596 FOXD2O60548 495 aaPredicted RBP7.84□□□□□ -1.15
CHD6-209ENST00000482596 MS4A1P11836 297 aa7.84□□□□□ -1.15
CHD6-209ENST00000482596 CDK11BP21127 795 aaKnown RBP7.84□□□□□ -1.15
CHD6-209ENST00000482596 GABPAQ06546 454 aa7.84□□□□□ -1.15
CHD6-209ENST00000482596 SIM2Q14190 667 aaPredicted RBP7.84□□□□□ -1.15
CHD6-209ENST00000482596 ATAT1Q5SQI0 421 aa7.84□□□□□ -1.15
CHD6-209ENST00000482596 NAA16Q6N069 864 aaPredicted RBP7.84□□□□□ -1.15
CHD6-209ENST00000482596 TMEM179Q6ZVK1 233 aa7.84□□□□□ -1.15
CHD6-209ENST00000482596 ZNF598Q86UK7 904 aaKnown RBP7.84□□□□□ -1.15
CHD6-209ENST00000482596 ST13P5Q8NFI4 369 aaPredicted RBP7.84□□□□□ -1.15
CHD6-209ENST00000482596 TMEM260Q9NX78 707 aa7.84□□□□□ -1.15
CHD6-209ENST00000482596 RAXQ9Y2V3 346 aa7.84□□□□□ -1.15
CHD6-209ENST00000482596 RAD50Q92878 1312 aa7.83□□□□□ -1.16
CHD6-209ENST00000482596 KANSL1LA0AUZ9 987 aa7.83□□□□□ -1.16
CHD6-209ENST00000482596 ENPP3O14638 875 aa7.83□□□□□ -1.16
CHD6-209ENST00000482596 ATXN7O15265 892 aaPredicted RBP7.83□□□□□ -1.16
CHD6-209ENST00000482596 FGF18O76093 207 aa7.83□□□□□ -1.16
CHD6-209ENST00000482596 AKR1B1P15121 316 aa7.83□□□□□ -1.16
CHD6-209ENST00000482596 NDUFV2P19404 249 aa7.83□□□□□ -1.16
CHD6-209ENST00000482596 CD72P21854 359 aa7.83□□□□□ -1.16
CHD6-209ENST00000482596 RIPPLY3P57055 190 aa7.83□□□□□ -1.16
CHD6-209ENST00000482596 UBE3AQ05086 875 aa7.83□□□□□ -1.16
CHD6-209ENST00000482596 SCAPQ12770 1279 aa7.83□□□□□ -1.16
CHD6-209ENST00000482596 UBXN2BQ14CS0 331 aa7.83□□□□□ -1.16
CHD6-209ENST00000482596 PTPN14Q15678 1187 aa7.83□□□□□ -1.16
CHD6-209ENST00000482596 Q6ZNB5 142 aa7.83□□□□□ -1.16
CHD6-209ENST00000482596 RUFY4Q6ZNE9 571 aa7.83□□□□□ -1.16
CHD6-209ENST00000482596 OTOP3Q7RTS5 596 aa7.83□□□□□ -1.16
CHD6-209ENST00000482596 CMTR2Q8IYT2 770 aaKnown RBP7.83□□□□□ -1.16
CHD6-209ENST00000482596 C7orf31Q8N865 590 aa7.83□□□□□ -1.16
CHD6-209ENST00000482596 SPATA5Q8NB90 893 aa7.83□□□□□ -1.16
CHD6-209ENST00000482596 MORC4Q8TE76 937 aa7.83□□□□□ -1.16
CHD6-209ENST00000482596 AFG1LQ8WV93 481 aa7.83□□□□□ -1.16
CHD6-209ENST00000482596 TSR2Q969E8 191 aaKnown RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms