RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 GOLGA6DP0CG33 693 aa16.35■□□□□ 0.21
ATG4B-220ENST00000482507 ACTN1P12814 892 aa16.35■□□□□ 0.21
ATG4B-220ENST00000482507 GCFC2P16383 781 aaKnown RBP16.35■□□□□ 0.21
ATG4B-220ENST00000482507 HOXA7P31268 230 aaPredicted RBP16.35■□□□□ 0.21
ATG4B-220ENST00000482507 PAFAH1B1P43034 410 aa16.35■□□□□ 0.21
ATG4B-220ENST00000482507 EPHB4P54760 987 aa16.35■□□□□ 0.21
ATG4B-220ENST00000482507 SLC12A3P55017 1021 aa16.35■□□□□ 0.21
ATG4B-220ENST00000482507 PSMC6P62333 389 aa16.35■□□□□ 0.21
ATG4B-220ENST00000482507 RAPGEF1Q13905 1077 aa16.35■□□□□ 0.21
ATG4B-220ENST00000482507 QRICH1Q2TAL8 776 aa16.35■□□□□ 0.21
ATG4B-220ENST00000482507 C8orf74Q6P047 294 aa16.35■□□□□ 0.21
ATG4B-220ENST00000482507 CCDC65Q8IXS2 484 aa16.35■□□□□ 0.21
ATG4B-220ENST00000482507 FAM76AQ8TAV0 307 aa16.35■□□□□ 0.21
ATG4B-220ENST00000482507 RUBCNQ92622 972 aa16.35■□□□□ 0.21
ATG4B-220ENST00000482507 IDI2Q9BXS1 227 aa16.35■□□□□ 0.21
ATG4B-220ENST00000482507 NT5C3AQ9H0P0 336 aa16.35■□□□□ 0.21
ATG4B-220ENST00000482507 BCAS3Q9H6U6 928 aa16.35■□□□□ 0.21
ATG4B-220ENST00000482507 GOLGA6AQ9NYA3 693 aa16.35■□□□□ 0.21
ATG4B-220ENST00000482507 ADAMTS1Q9UHI8 967 aa16.35■□□□□ 0.21
ATG4B-220ENST00000482507 KDM3AQ9Y4C1 1321 aa16.34■□□□□ 0.21
ATG4B-220ENST00000482507 ESYT3A0FGR9 886 aa16.34■□□□□ 0.21
ATG4B-220ENST00000482507 FRMD3A2A2Y4 597 aa16.34■□□□□ 0.21
ATG4B-220ENST00000482507 HOXD13P35453 343 aa16.34■□□□□ 0.21
ATG4B-220ENST00000482507 SLC18A3Q16572 532 aa16.34■□□□□ 0.21
ATG4B-220ENST00000482507 GPATCH4Q5T3I0 446 aaKnown RBP16.34■□□□□ 0.21
ATG4B-220ENST00000482507 DNAAF5Q86Y56 855 aa16.34■□□□□ 0.21
ATG4B-220ENST00000482507 ARL8AQ96BM9 186 aa16.34■□□□□ 0.21
ATG4B-220ENST00000482507 TMEM39BQ9GZU3 492 aa16.34■□□□□ 0.21
ATG4B-220ENST00000482507 BMP2KQ9NSY1 1161 aaPredicted RBP16.34■□□□□ 0.21
ATG4B-220ENST00000482507 FAM153BP0C7A2 387 aa16.34■□□□□ 0.21
ATG4B-220ENST00000482507 CARSP49589 748 aaKnown RBP16.34■□□□□ 0.21
ATG4B-220ENST00000482507 SPIRE1Q08AE8 756 aa16.34■□□□□ 0.21
ATG4B-220ENST00000482507 ADAM9Q13443 819 aa16.34■□□□□ 0.21
ATG4B-220ENST00000482507 FAM153CQ494X1 144 aa16.34■□□□□ 0.21
ATG4B-220ENST00000482507 TTMPQ5BVD1 217 aa16.34■□□□□ 0.21
ATG4B-220ENST00000482507 ANO3Q9BYT9 981 aa16.34■□□□□ 0.21
ATG4B-220ENST00000482507 SWAP70Q9UH65 585 aa16.34■□□□□ 0.21
ATG4B-220ENST00000482507 FAM153AQ9UHL3 310 aa16.34■□□□□ 0.21
ATG4B-220ENST00000482507 PCDHGC5Q9Y5F6 944 aa16.34■□□□□ 0.21
ATG4B-220ENST00000482507 GREB1LQ9C091 1923 aaPredicted RBP16.33■□□□□ 0.21
ATG4B-220ENST00000482507 PPFIA4O75335 1185 aa16.33■□□□□ 0.2
ATG4B-220ENST00000482507 RPS12P25398 132 aaKnown RBP16.33■□□□□ 0.2
ATG4B-220ENST00000482507 TNFRSF8P28908 595 aa16.33■□□□□ 0.2
ATG4B-220ENST00000482507 ZNF280AP59817 542 aaPredicted RBP16.33■□□□□ 0.2
ATG4B-220ENST00000482507 SNAP25P60880 206 aa16.33■□□□□ 0.2
ATG4B-220ENST00000482507 KCNH2Q12809 1159 aa16.33■□□□□ 0.2
ATG4B-220ENST00000482507 TRADDQ15628 312 aa16.33■□□□□ 0.2
ATG4B-220ENST00000482507 SKIDA1Q1XH10 827 aa16.33■□□□□ 0.2
ATG4B-220ENST00000482507 CFAP221Q4G0U5 840 aa16.33■□□□□ 0.2
ATG4B-220ENST00000482507 MEI1Q5TIA1 1274 aa16.33■□□□□ 0.2
ATG4B-220ENST00000482507 GPC2Q8N158 579 aa16.33■□□□□ 0.2
ATG4B-220ENST00000482507 TRPM4Q8TD43 1214 aa16.33■□□□□ 0.2
ATG4B-220ENST00000482507 CAVIN3Q969G5 261 aa16.33■□□□□ 0.2
ATG4B-220ENST00000482507 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.33■□□□□ 0.2
ATG4B-220ENST00000482507 NUCKS1Q9H1E3 243 aaKnown RBP16.33■□□□□ 0.2
ATG4B-220ENST00000482507 ZHX3Q9H4I2 956 aa16.33■□□□□ 0.2
ATG4B-220ENST00000482507 AIPL1Q9NZN9 384 aa16.33■□□□□ 0.2
ATG4B-220ENST00000482507 PCDHA1Q9Y5I3 950 aa16.33■□□□□ 0.2
ATG4B-220ENST00000482507 GRID2IPA4D2P6 1211 aa16.33■□□□□ 0.2
ATG4B-220ENST00000482507 MEIS1O00470 390 aa16.33■□□□□ 0.2
ATG4B-220ENST00000482507 MEIS2O14770 477 aa16.33■□□□□ 0.2
ATG4B-220ENST00000482507 RAD21O60216 631 aa16.33■□□□□ 0.2
ATG4B-220ENST00000482507 TAL1P17542 331 aaPredicted RBP16.33■□□□□ 0.2
ATG4B-220ENST00000482507 RNASE9P60153 205 aaKnown RBP16.33■□□□□ 0.2
ATG4B-220ENST00000482507 SLC20A2Q08357 652 aa16.33■□□□□ 0.2
ATG4B-220ENST00000482507 SPDYE2Q495Y8 402 aa16.33■□□□□ 0.2
ATG4B-220ENST00000482507 EMBQ6PCB8 327 aa16.33■□□□□ 0.2
ATG4B-220ENST00000482507 MBOAT7Q96N66 472 aa16.33■□□□□ 0.2
ATG4B-220ENST00000482507 INPP4AQ96PE3 977 aaPredicted RBP16.33■□□□□ 0.2
ATG4B-220ENST00000482507 RASSF4Q9H2L5 321 aa16.33■□□□□ 0.2
ATG4B-220ENST00000482507 DHX36Q9H2U1 1008 aaKnown RBP16.33■□□□□ 0.2
ATG4B-220ENST00000482507 GDF3Q9NR23 364 aa16.33■□□□□ 0.2
ATG4B-220ENST00000482507 MYH4Q9Y623 1939 aa16.32■□□□□ 0.2
ATG4B-220ENST00000482507 GNA14O95837 355 aa16.32■□□□□ 0.2
ATG4B-220ENST00000482507 SLC9A1P19634 815 aa16.32■□□□□ 0.2
ATG4B-220ENST00000482507 IRAK1P51617 712 aa16.32■□□□□ 0.2
ATG4B-220ENST00000482507 KLHL30Q0D2K2 578 aa16.32■□□□□ 0.2
ATG4B-220ENST00000482507 KIAA0753Q2KHM9 967 aa16.32■□□□□ 0.2
ATG4B-220ENST00000482507 CATSPER3Q86XQ3 398 aa16.32■□□□□ 0.2
ATG4B-220ENST00000482507 ETNPPLQ8TBG4 499 aa16.32■□□□□ 0.2
ATG4B-220ENST00000482507 CRYGNQ8WXF5 182 aa16.32■□□□□ 0.2
ATG4B-220ENST00000482507 ZBED3Q96IU2 234 aaPredicted RBP16.32■□□□□ 0.2
ATG4B-220ENST00000482507 POLD4Q9HCU8 107 aa16.32■□□□□ 0.2
ATG4B-220ENST00000482507 GPRC5DQ9NZD1 345 aa16.32■□□□□ 0.2
ATG4B-220ENST00000482507 NFU1Q9UMS0 254 aa16.32■□□□□ 0.2
ATG4B-220ENST00000482507 GRIN2DO15399 1336 aa16.32■□□□□ 0.2
ATG4B-220ENST00000482507 CYP3A7-CYP3A51PA0A087WV96 503 aa16.31■□□□□ 0.2
ATG4B-220ENST00000482507 CYP3A7P24462 503 aa16.31■□□□□ 0.2
ATG4B-220ENST00000482507 NR2F2P24468 414 aa16.31■□□□□ 0.2
ATG4B-220ENST00000482507 GIT2Q14161 759 aa16.31■□□□□ 0.2
ATG4B-220ENST00000482507 PRAMEF18Q5VWM3 479 aa16.31■□□□□ 0.2
ATG4B-220ENST00000482507 IRF2BP2Q7Z5L9 587 aa16.31■□□□□ 0.2
ATG4B-220ENST00000482507 ZIM3Q96PE6 472 aa16.31■□□□□ 0.2
ATG4B-220ENST00000482507 TSPYL1Q9H0U9 437 aa16.31■□□□□ 0.2
ATG4B-220ENST00000482507 GOLPH3Q9H4A6 298 aa16.31■□□□□ 0.2
ATG4B-220ENST00000482507 TMOD2Q9NZR1 351 aa16.31■□□□□ 0.2
ATG4B-220ENST00000482507 TSKSQ9UJT2 592 aa16.31■□□□□ 0.2
ATG4B-220ENST00000482507 SPATA31C1P0DKV0 1188 aa16.31■□□□□ 0.2
ATG4B-220ENST00000482507 HIRAP54198 1017 aaPredicted RBP16.31■□□□□ 0.2
ATG4B-220ENST00000482507 GUCY2DQ02846 1103 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms