RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 GOLGA6L22H0YM25 854 aa7.85□□□□□ -1.15
SF3B1-210ENST00000482158 MC4RP32245 332 aa7.85□□□□□ -1.15
SF3B1-210ENST00000482158 LSP1P33241 339 aa7.85□□□□□ -1.15
SF3B1-210ENST00000482158 LCE3BQ5TA77 95 aa7.85□□□□□ -1.15
SF3B1-210ENST00000482158 RASSF3Q86WH2 238 aa7.85□□□□□ -1.15
SF3B1-210ENST00000482158 CMIPQ8IY22 773 aa7.85□□□□□ -1.15
SF3B1-210ENST00000482158 CBARPQ8N350 705 aaPredicted RBP7.85□□□□□ -1.15
SF3B1-210ENST00000482158 MZB1Q8WU39 189 aa7.85□□□□□ -1.15
SF3B1-210ENST00000482158 ZNF496Q96IT1 587 aaPredicted RBP7.85□□□□□ -1.15
SF3B1-210ENST00000482158 SEMA4AQ9H3S1 761 aa7.85□□□□□ -1.15
SF3B1-210ENST00000482158 SLC39A2Q9NP94 309 aa7.85□□□□□ -1.15
SF3B1-210ENST00000482158 TOPORSQ9NS56 1045 aaPredicted RBP7.85□□□□□ -1.15
SF3B1-210ENST00000482158 NKX3-2P78367 333 aa7.84□□□□□ -1.15
SF3B1-210ENST00000482158 TARBP2Q15633 366 aaKnown RBP7.84□□□□□ -1.15
SF3B1-210ENST00000482158 INAVAQ3KP66 663 aa7.84□□□□□ -1.15
SF3B1-210ENST00000482158 CILP2Q8IUL8 1156 aa7.84□□□□□ -1.15
SF3B1-210ENST00000482158 ZDHHC5Q9C0B5 715 aa7.84□□□□□ -1.15
SF3B1-210ENST00000482158 TRHDEQ9UKU6 1024 aa7.84□□□□□ -1.15
SF3B1-210ENST00000482158 ASB1Q9Y576 335 aa7.84□□□□□ -1.15
SF3B1-210ENST00000482158 ZNF839A8K0R7 811 aa7.83□□□□□ -1.16
SF3B1-210ENST00000482158 NFIBO00712 420 aa7.83□□□□□ -1.16
SF3B1-210ENST00000482158 GABRDO14764 452 aa7.83□□□□□ -1.16
SF3B1-210ENST00000482158 N4BP3O15049 544 aa7.83□□□□□ -1.16
SF3B1-210ENST00000482158 PFKPQ01813 784 aa7.83□□□□□ -1.16
SF3B1-210ENST00000482158 ITKQ08881 620 aa7.83□□□□□ -1.16
SF3B1-210ENST00000482158 PDCD1Q15116 288 aa7.83□□□□□ -1.16
SF3B1-210ENST00000482158 SYDE2Q5VT97 1194 aa7.83□□□□□ -1.16
SF3B1-210ENST00000482158 TMC5Q6UXY8 1006 aa7.83□□□□□ -1.16
SF3B1-210ENST00000482158 B3GNT8Q7Z7M8 397 aa7.83□□□□□ -1.16
SF3B1-210ENST00000482158 ZZZ3Q8IYH5 903 aa7.83□□□□□ -1.16
SF3B1-210ENST00000482158 SMARCC2Q8TAQ2 1214 aa7.83□□□□□ -1.16
SF3B1-210ENST00000482158 ERCC4Q92889 916 aaPredicted RBP7.83□□□□□ -1.16
SF3B1-210ENST00000482158 DDX11Q96FC9 970 aa7.83□□□□□ -1.16
SF3B1-210ENST00000482158 AMNQ9BXJ7 453 aa7.83□□□□□ -1.16
SF3B1-210ENST00000482158 NGRNQ9NPE2 291 aaKnown RBP7.83□□□□□ -1.16
SF3B1-210ENST00000482158 PRAMEF22A3QJZ6 481 aa7.82□□□□□ -1.16
SF3B1-210ENST00000482158 SEMA7AO75326 666 aa7.82□□□□□ -1.16
SF3B1-210ENST00000482158 ENO2P09104 434 aaPredicted RBP7.82□□□□□ -1.16
SF3B1-210ENST00000482158 PTGS1P23219 599 aa7.82□□□□□ -1.16
SF3B1-210ENST00000482158 CD40P25942 277 aa7.82□□□□□ -1.16
SF3B1-210ENST00000482158 MESP2Q0VG99 397 aa7.82□□□□□ -1.16
SF3B1-210ENST00000482158 MOGSQ13724 837 aa7.82□□□□□ -1.16
SF3B1-210ENST00000482158 RTP5Q14D33 572 aa7.82□□□□□ -1.16
SF3B1-210ENST00000482158 PRAMEF18Q5VWM3 479 aa7.82□□□□□ -1.16
SF3B1-210ENST00000482158 MCTP1Q6DN14 999 aa7.82□□□□□ -1.16
SF3B1-210ENST00000482158 TMEM132EQ6IEE7 984 aa7.82□□□□□ -1.16
SF3B1-210ENST00000482158 ZC3H18Q86VM9 953 aaKnown RBP7.82□□□□□ -1.16
SF3B1-210ENST00000482158 DTX3Q8N9I9 347 aa7.82□□□□□ -1.16
SF3B1-210ENST00000482158 FBXO15Q8NCQ5 510 aaPredicted RBP7.82□□□□□ -1.16
SF3B1-210ENST00000482158 MTMR8Q96EF0 704 aa7.82□□□□□ -1.16
SF3B1-210ENST00000482158 GORASP1Q9BQQ3 440 aa7.82□□□□□ -1.16
SF3B1-210ENST00000482158 MENTQ9BUN1 341 aa7.82□□□□□ -1.16
SF3B1-210ENST00000482158 UCKL1Q9NWZ5 548 aa7.82□□□□□ -1.16
SF3B1-210ENST00000482158 THRAP3Q9Y2W1 955 aaKnown RBP7.82□□□□□ -1.16
SF3B1-210ENST00000482158 HMGB1P09429 215 aaKnown RBP7.81□□□□□ -1.16
SF3B1-210ENST00000482158 CYP2C8P10632 490 aa7.81□□□□□ -1.16
SF3B1-210ENST00000482158 ITGA1P56199 1179 aa7.81□□□□□ -1.16
SF3B1-210ENST00000482158 DLG4P78352 724 aa7.81□□□□□ -1.16
SF3B1-210ENST00000482158 FAPQ12884 760 aa7.81□□□□□ -1.16
SF3B1-210ENST00000482158 ADAM9Q13443 819 aa7.81□□□□□ -1.16
SF3B1-210ENST00000482158 FRMD7Q6ZUT3 714 aa7.81□□□□□ -1.16
SF3B1-210ENST00000482158 STK32CQ86UX6 486 aa7.81□□□□□ -1.16
SF3B1-210ENST00000482158 TMEFF1Q8IYR6 380 aa7.81□□□□□ -1.16
SF3B1-210ENST00000482158 HIPK4Q8NE63 616 aa7.81□□□□□ -1.16
SF3B1-210ENST00000482158 IGDCC4Q8TDY8 1250 aa7.81□□□□□ -1.16
SF3B1-210ENST00000482158 AHCYL2Q96HN2 611 aaKnown RBP7.81□□□□□ -1.16
SF3B1-210ENST00000482158 NOX5Q96PH1 765 aa7.81□□□□□ -1.16
SF3B1-210ENST00000482158 C14orf119Q9NWQ9 140 aa7.81□□□□□ -1.16
SF3B1-210ENST00000482158 KLHL42Q9P2K6 505 aa7.81□□□□□ -1.16
SF3B1-210ENST00000482158 ARHGAP28Q9P2N2 729 aa7.81□□□□□ -1.16
SF3B1-210ENST00000482158 MSRAQ9UJ68 235 aa7.81□□□□□ -1.16
SF3B1-210ENST00000482158 NOC2LQ9Y3T9 749 aaKnown RBP7.81□□□□□ -1.16
SF3B1-210ENST00000482158 ELL2O00472 640 aaPredicted RBP7.8□□□□□ -1.16
SF3B1-210ENST00000482158 KDM1AO60341 852 aa7.8□□□□□ -1.16
SF3B1-210ENST00000482158 PRLP01236 227 aa7.8□□□□□ -1.16
SF3B1-210ENST00000482158 PFKLP17858 780 aa7.8□□□□□ -1.16
SF3B1-210ENST00000482158 FOXO4P98177 505 aa7.8□□□□□ -1.16
SF3B1-210ENST00000482158 ALDH6A1Q02252 535 aaKnown RBP7.8□□□□□ -1.16
SF3B1-210ENST00000482158 ADCY1Q08828 1119 aa7.8□□□□□ -1.16
SF3B1-210ENST00000482158 SKIDA1Q1XH10 827 aa7.8□□□□□ -1.16
SF3B1-210ENST00000482158 PHF19Q5T6S3 580 aa7.8□□□□□ -1.16
SF3B1-210ENST00000482158 VASNQ6EMK4 673 aa7.8□□□□□ -1.16
SF3B1-210ENST00000482158 LRSAM1Q6UWE0 723 aa7.8□□□□□ -1.16
SF3B1-210ENST00000482158 NME9Q86XW9 330 aa7.8□□□□□ -1.16
SF3B1-210ENST00000482158 LMBR1Q8WVP7 490 aa7.8□□□□□ -1.16
SF3B1-210ENST00000482158 INCENPQ9NQS7 918 aa7.8□□□□□ -1.16
SF3B1-210ENST00000482158 TNKSO95271 1327 aa7.79□□□□□ -1.16
SF3B1-210ENST00000482158 FZD9O00144 591 aa7.79□□□□□ -1.16
SF3B1-210ENST00000482158 ETV2O00321 342 aaPredicted RBP7.79□□□□□ -1.16
SF3B1-210ENST00000482158 ALDH1L1O75891 902 aa7.79□□□□□ -1.16
SF3B1-210ENST00000482158 IL18BPO95998 194 aa7.79□□□□□ -1.16
SF3B1-210ENST00000482158 KRT1P04264 644 aa7.79□□□□□ -1.16
SF3B1-210ENST00000482158 KLF1Q13351 362 aaPredicted RBP7.79□□□□□ -1.16
SF3B1-210ENST00000482158 MYBPC3Q14896 1274 aa7.79□□□□□ -1.16
SF3B1-210ENST00000482158 PHYKPLQ8IUZ5 450 aa7.79□□□□□ -1.16
SF3B1-210ENST00000482158 RAVER1Q8IY67 606 aaKnown RBP7.79□□□□□ -1.16
SF3B1-210ENST00000482158 LINC00482Q8N8I6 264 aa7.79□□□□□ -1.16
SF3B1-210ENST00000482158 MAML3Q96JK9 1138 aa7.79□□□□□ -1.16
SF3B1-210ENST00000482158 FOXB1Q99853 325 aa7.79□□□□□ -1.16
SF3B1-210ENST00000482158 C11orf84Q9BUA3 381 aaPredicted RBP7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms