RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 CHMP4BP1P59074 171 aa15.95■□□□□ 0.14
CHD3-211ENST00000481999 MTMR1Q13613 665 aa15.95■□□□□ 0.14
CHD3-211ENST00000481999 C9orf131Q5VYM1 1079 aa15.95■□□□□ 0.14
CHD3-211ENST00000481999 REPS2Q8NFH8 660 aa15.95■□□□□ 0.14
CHD3-211ENST00000481999 CLMNQ96JQ2 1002 aa15.95■□□□□ 0.14
CHD3-211ENST00000481999 CRACR2AQ9BSW2 395 aa15.95■□□□□ 0.14
CHD3-211ENST00000481999 PARD6BQ9BYG5 372 aa15.95■□□□□ 0.14
CHD3-211ENST00000481999 LRRC27Q9C0I9 530 aa15.95■□□□□ 0.14
CHD3-211ENST00000481999 ARFGAP3Q9NP61 516 aa15.95■□□□□ 0.14
CHD3-211ENST00000481999 A0A1W2PQC6 194 aa15.94■□□□□ 0.14
CHD3-211ENST00000481999 ZBED4O75132 1171 aa15.94■□□□□ 0.14
CHD3-211ENST00000481999 EYA4O95677 639 aa15.94■□□□□ 0.14
CHD3-211ENST00000481999 SP4Q02446 784 aa15.94■□□□□ 0.14
CHD3-211ENST00000481999 FSTL1Q12841 308 aa15.94■□□□□ 0.14
CHD3-211ENST00000481999 PSMD2Q13200 908 aa15.94■□□□□ 0.14
CHD3-211ENST00000481999 UGCGQ16739 394 aa15.94■□□□□ 0.14
CHD3-211ENST00000481999 B3GNT9Q6UX72 402 aa15.94■□□□□ 0.14
CHD3-211ENST00000481999 NOC3LQ8WTT2 800 aaKnown RBP15.94■□□□□ 0.14
CHD3-211ENST00000481999 TEKT3Q9BXF9 490 aa15.94■□□□□ 0.14
CHD3-211ENST00000481999 TTYH3Q9C0H2 523 aa15.94■□□□□ 0.14
CHD3-211ENST00000481999 EPC1Q9H2F5 836 aa15.94■□□□□ 0.14
CHD3-211ENST00000481999 TRIM10Q9UDY6 481 aa15.94■□□□□ 0.14
CHD3-211ENST00000481999 SNCAIPQ9Y6H5 919 aa15.94■□□□□ 0.14
CHD3-211ENST00000481999 DICER1Q9UPY3 1922 aaKnown RBP15.94■□□□□ 0.14
CHD3-211ENST00000481999 CLIC2O15247 247 aa15.94■□□□□ 0.14
CHD3-211ENST00000481999 GCNT3O95395 438 aa15.94■□□□□ 0.14
CHD3-211ENST00000481999 PLEKP08567 350 aaPredicted RBP15.94■□□□□ 0.14
CHD3-211ENST00000481999 LRRC63Q05C16 580 aa15.94■□□□□ 0.14
CHD3-211ENST00000481999 VWA3BQ502W6 1294 aa15.94■□□□□ 0.14
CHD3-211ENST00000481999 PDCD2LQ9BRP1 358 aa15.94■□□□□ 0.14
CHD3-211ENST00000481999 PXMP2Q9NR77 195 aa15.94■□□□□ 0.14
CHD3-211ENST00000481999 ST7Q9NRC1 585 aa15.94■□□□□ 0.14
CHD3-211ENST00000481999 AFG3L2Q9Y4W6 797 aa15.94■□□□□ 0.14
CHD3-211ENST00000481999 DOCK5Q9H7D0 1870 aa15.93■□□□□ 0.14
CHD3-211ENST00000481999 SEC31AO94979 1220 aaKnown RBP15.93■□□□□ 0.14
CHD3-211ENST00000481999 COG2Q14746 738 aa15.93■□□□□ 0.14
CHD3-211ENST00000481999 C1orf186Q6ZWK4 172 aa15.93■□□□□ 0.14
CHD3-211ENST00000481999 EHMT1Q9H9B1 1298 aa15.93■□□□□ 0.14
CHD3-211ENST00000481999 AS3MTQ9HBK9 375 aa15.93■□□□□ 0.14
CHD3-211ENST00000481999 AGO4Q9HCK5 861 aaKnown RBP15.93■□□□□ 0.14
CHD3-211ENST00000481999 LUC7L2Q9Y383 392 aaKnown RBP15.93■□□□□ 0.14
CHD3-211ENST00000481999 PITPNM2Q9BZ72 1349 aa15.93■□□□□ 0.14
CHD3-211ENST00000481999 SPDYE16A6NNV3 312 aaPredicted RBP15.93■□□□□ 0.14
CHD3-211ENST00000481999 POTEB2H3BUK9 544 aa15.93■□□□□ 0.14
CHD3-211ENST00000481999 TBC1D8O95759 1140 aa15.93■□□□□ 0.14
CHD3-211ENST00000481999 ARHGEF16Q5VV41 709 aa15.93■□□□□ 0.14
CHD3-211ENST00000481999 PCNX4Q63HM2 1172 aa15.93■□□□□ 0.14
CHD3-211ENST00000481999 MCF2L2Q86YR7 1114 aa15.93■□□□□ 0.14
CHD3-211ENST00000481999 CCDC151A5D8V7 595 aa15.92■□□□□ 0.14
CHD3-211ENST00000481999 TFRCP02786 760 aaKnown RBP15.92■□□□□ 0.14
CHD3-211ENST00000481999 NR2F2P24468 414 aa15.92■□□□□ 0.14
CHD3-211ENST00000481999 DSG3P32926 999 aa15.92■□□□□ 0.14
CHD3-211ENST00000481999 CASP4P49662 377 aa15.92■□□□□ 0.14
CHD3-211ENST00000481999 FKBP3Q00688 224 aaKnown RBP15.92■□□□□ 0.14
CHD3-211ENST00000481999 SETQ01105 290 aaPredicted RBP15.92■□□□□ 0.14
CHD3-211ENST00000481999 BRD3Q15059 726 aa15.92■□□□□ 0.14
CHD3-211ENST00000481999 CCDC40Q4G0X9 1142 aa15.92■□□□□ 0.14
CHD3-211ENST00000481999 MIER3Q7Z3K6 550 aa15.92■□□□□ 0.14
CHD3-211ENST00000481999 FAM114A1Q8IWE2 563 aa15.92■□□□□ 0.14
CHD3-211ENST00000481999 SLC35F6Q8N357 371 aa15.92■□□□□ 0.14
CHD3-211ENST00000481999 MYCT1Q8N699 235 aa15.92■□□□□ 0.14
CHD3-211ENST00000481999 OR8K1Q8NGG5 319 aa15.92■□□□□ 0.14
CHD3-211ENST00000481999 NAPGQ99747 312 aaPredicted RBP15.92■□□□□ 0.14
CHD3-211ENST00000481999 MMRN2Q9H8L6 949 aa15.92■□□□□ 0.14
CHD3-211ENST00000481999 REXO2Q9Y3B8 237 aaKnown RBP15.92■□□□□ 0.14
CHD3-211ENST00000481999 UBIAD1Q9Y5Z9 338 aa15.92■□□□□ 0.14
CHD3-211ENST00000481999 TBCAO75347 108 aaKnown RBP15.92■□□□□ 0.14
CHD3-211ENST00000481999 CCNE2O96020 404 aa15.92■□□□□ 0.14
CHD3-211ENST00000481999 ARHGAP25P42331 645 aa15.92■□□□□ 0.14
CHD3-211ENST00000481999 ADAM9Q13443 819 aa15.92■□□□□ 0.14
CHD3-211ENST00000481999 TSG101Q99816 390 aa15.92■□□□□ 0.14
CHD3-211ENST00000481999 CAPN11Q9UMQ6 739 aa15.92■□□□□ 0.14
CHD3-211ENST00000481999 SIK3Q9Y2K2 1263 aa15.92■□□□□ 0.14
CHD3-211ENST00000481999 COL4A3BPQ9Y5P4 624 aa15.92■□□□□ 0.14
CHD3-211ENST00000481999 RGS20O76081 388 aa15.91■□□□□ 0.14
CHD3-211ENST00000481999 PPP1R2P41236 205 aa15.91■□□□□ 0.14
CHD3-211ENST00000481999 MAN2A1Q16706 1144 aa15.91■□□□□ 0.14
CHD3-211ENST00000481999 TSR1Q2NL82 804 aaKnown RBP15.91■□□□□ 0.14
CHD3-211ENST00000481999 CATSPERGQ6ZRH7 1159 aa15.91■□□□□ 0.14
CHD3-211ENST00000481999 KRT26Q7Z3Y9 468 aa15.91■□□□□ 0.14
CHD3-211ENST00000481999 OTUD5Q96G74 571 aa15.91■□□□□ 0.14
CHD3-211ENST00000481999 DNAJC7Q99615 494 aa15.91■□□□□ 0.14
CHD3-211ENST00000481999 ELP3Q9H9T3 547 aa15.91■□□□□ 0.14
CHD3-211ENST00000481999 TUFT1Q9NNX1 390 aa15.91■□□□□ 0.14
CHD3-211ENST00000481999 A1CFQ9NQ94 594 aaKnown RBP15.91■□□□□ 0.14
CHD3-211ENST00000481999 JADE2Q9NQC1 790 aa15.91■□□□□ 0.14
CHD3-211ENST00000481999 EPN1Q9Y6I3 576 aaPredicted RBP15.91■□□□□ 0.14
CHD3-211ENST00000481999 IRF6O14896 467 aa15.91■□□□□ 0.14
CHD3-211ENST00000481999 KCNMA1Q12791 1236 aa15.91■□□□□ 0.14
CHD3-211ENST00000481999 WHAMMP3Q1A5X7 153 aa15.91■□□□□ 0.14
CHD3-211ENST00000481999 EPM2AIP1Q7L775 607 aaPredicted RBP15.91■□□□□ 0.14
CHD3-211ENST00000481999 DAW1Q8N136 415 aa15.91■□□□□ 0.14
CHD3-211ENST00000481999 FIZ1Q96SL8 496 aa15.91■□□□□ 0.14
CHD3-211ENST00000481999 PUF60Q9UHX1 559 aaKnown RBP15.91■□□□□ 0.14
CHD3-211ENST00000481999 ASTN1O14525 1302 aa15.9■□□□□ 0.14
CHD3-211ENST00000481999 TISP43B9A030 160 aa15.9■□□□□ 0.14
CHD3-211ENST00000481999 NDUFA10O95299 355 aa15.9■□□□□ 0.14
CHD3-211ENST00000481999 EPHA7Q15375 998 aa15.9■□□□□ 0.14
CHD3-211ENST00000481999 PLA2G4FQ68DD2 849 aa15.9■□□□□ 0.14
CHD3-211ENST00000481999 SULF1Q8IWU6 871 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms