RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 KCNA3P22001 575 aa3.98□□□□□ -1.77
SMC6-208ENST00000481708 PIK3CBP42338 1070 aa3.98□□□□□ -1.77
SMC6-208ENST00000481708 CASP2P42575 452 aa3.98□□□□□ -1.77
SMC6-208ENST00000481708 TUBP50607 506 aa3.98□□□□□ -1.77
SMC6-208ENST00000481708 PDCD1Q15116 288 aa3.98□□□□□ -1.77
SMC6-208ENST00000481708 GNPTABQ3T906 1256 aa3.98□□□□□ -1.77
SMC6-208ENST00000481708 RRP12Q5JTH9 1297 aaKnown RBP3.98□□□□□ -1.77
SMC6-208ENST00000481708 L1TD1Q5T7N2 865 aaKnown RBP3.98□□□□□ -1.77
SMC6-208ENST00000481708 KIAA1614Q5VZ46 1190 aa3.98□□□□□ -1.77
SMC6-208ENST00000481708 MAP1SQ66K74 1059 aaPredicted RBP3.98□□□□□ -1.77
SMC6-208ENST00000481708 MYCT1Q8N699 235 aa3.98□□□□□ -1.77
SMC6-208ENST00000481708 GPR161Q8N6U8 529 aaKnown RBP3.98□□□□□ -1.77
SMC6-208ENST00000481708 NANOS1Q8WY41 292 aaKnown RBP3.98□□□□□ -1.77
SMC6-208ENST00000481708 BRF1Q92994 677 aa3.98□□□□□ -1.77
SMC6-208ENST00000481708 AKAP11Q9UKA4 1901 aa3.98□□□□□ -1.77
SMC6-208ENST00000481708 ATAD5Q96QE3 1844 aa3.98□□□□□ -1.77
SMC6-208ENST00000481708 SPEF2Q9C093 1822 aa3.98□□□□□ -1.77
SMC6-208ENST00000481708 TCERG1O14776 1098 aaKnown RBP3.98□□□□□ -1.77
SMC6-208ENST00000481708 TP53P04637 393 aaPredicted RBP3.98□□□□□ -1.77
SMC6-208ENST00000481708 ABCB4P21439 1286 aa3.98□□□□□ -1.77
SMC6-208ENST00000481708 NME2P22392 152 aa3.98□□□□□ -1.77
SMC6-208ENST00000481708 IGFALSP35858 605 aa3.98□□□□□ -1.77
SMC6-208ENST00000481708 RECQLP46063 649 aaPredicted RBP3.98□□□□□ -1.77
SMC6-208ENST00000481708 SLC7A5Q01650 507 aa3.98□□□□□ -1.77
SMC6-208ENST00000481708 SEMA5AQ13591 1074 aa3.98□□□□□ -1.77
SMC6-208ENST00000481708 CFAP100Q494V2 611 aa3.98□□□□□ -1.77
SMC6-208ENST00000481708 AGAP9Q5VTM2 703 aa3.98□□□□□ -1.77
SMC6-208ENST00000481708 KCT2Q8NC54 265 aa3.98□□□□□ -1.77
SMC6-208ENST00000481708 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.98□□□□□ -1.77
SMC6-208ENST00000481708 CHTF18Q8WVB6 975 aa3.98□□□□□ -1.77
SMC6-208ENST00000481708 DIO2Q92813 273 aa3.98□□□□□ -1.77
SMC6-208ENST00000481708 TEKT5Q96M29 485 aa3.98□□□□□ -1.77
SMC6-208ENST00000481708 TBCBQ99426 244 aa3.98□□□□□ -1.77
SMC6-208ENST00000481708 ITM2CQ9NQX7 267 aa3.98□□□□□ -1.77
SMC6-208ENST00000481708 PCDHA9Q9Y5H5 950 aa3.98□□□□□ -1.77
SMC6-208ENST00000481708 A0A1W2PRQ8 180 aa3.97□□□□□ -1.77
SMC6-208ENST00000481708 GFPT2O94808 682 aa3.97□□□□□ -1.77
SMC6-208ENST00000481708 CPP00450 1065 aa3.97□□□□□ -1.77
SMC6-208ENST00000481708 NCAM1P13591 858 aa3.97□□□□□ -1.77
SMC6-208ENST00000481708 ATP2A2P16615 1042 aaKnown RBP3.97□□□□□ -1.77
SMC6-208ENST00000481708 MAPK9P45984 424 aa3.97□□□□□ -1.77
SMC6-208ENST00000481708 TBC1D8BQ0IIM8 1120 aa3.97□□□□□ -1.77
SMC6-208ENST00000481708 DDX10Q13206 875 aaKnown RBP3.97□□□□□ -1.77
SMC6-208ENST00000481708 SLC45A4Q5BKX6 768 aa3.97□□□□□ -1.77
SMC6-208ENST00000481708 FAM26FQ5R3K3 315 aa3.97□□□□□ -1.77
SMC6-208ENST00000481708 LLGL2Q6P1M3 1020 aa3.97□□□□□ -1.77
SMC6-208ENST00000481708 NSMFQ6X4W1 530 aa3.97□□□□□ -1.77
SMC6-208ENST00000481708 OR2C3Q8N628 320 aa3.97□□□□□ -1.77
SMC6-208ENST00000481708 LRRN4CLQ8ND94 238 aa3.97□□□□□ -1.77
SMC6-208ENST00000481708 UBE2OQ9C0C9 1292 aaKnown RBP3.97□□□□□ -1.77
SMC6-208ENST00000481708 NRSN2Q9GZP1 204 aa3.97□□□□□ -1.77
SMC6-208ENST00000481708 KLHL25Q9H0H3 589 aa3.97□□□□□ -1.77
SMC6-208ENST00000481708 LRRC10BA6NIK2 292 aa3.97□□□□□ -1.77
SMC6-208ENST00000481708 SIN3BO75182 1162 aa3.97□□□□□ -1.77
SMC6-208ENST00000481708 ATP1A3P13637 1013 aa3.97□□□□□ -1.77
SMC6-208ENST00000481708 CPB1P15086 417 aa3.97□□□□□ -1.77
SMC6-208ENST00000481708 BIRC3Q13489 604 aa3.97□□□□□ -1.77
SMC6-208ENST00000481708 SLC10A5Q5PT55 438 aa3.97□□□□□ -1.77
SMC6-208ENST00000481708 KCNT2Q6UVM3 1135 aa3.97□□□□□ -1.77
SMC6-208ENST00000481708 KRT28Q7Z3Y7 464 aa3.97□□□□□ -1.77
SMC6-208ENST00000481708 FCHSD1Q86WN1 690 aa3.97□□□□□ -1.77
SMC6-208ENST00000481708 OR10H5Q8NGA6 315 aa3.97□□□□□ -1.77
SMC6-208ENST00000481708 DIS3LQ8TF46 1054 aaKnown RBP3.97□□□□□ -1.77
SMC6-208ENST00000481708 BTN2A2Q8WVV5 523 aa3.97□□□□□ -1.77
SMC6-208ENST00000481708 USP7Q93009 1102 aa3.97□□□□□ -1.77
SMC6-208ENST00000481708 TNFRSF25Q93038 417 aa3.97□□□□□ -1.77
SMC6-208ENST00000481708 ACSF2Q96CM8 615 aaPredicted RBP3.97□□□□□ -1.77
SMC6-208ENST00000481708 IRX2Q9BZI1 471 aaPredicted RBP3.97□□□□□ -1.77
SMC6-208ENST00000481708 RETREG1Q9H6L5 497 aa3.97□□□□□ -1.77
SMC6-208ENST00000481708 APOBEC2Q9Y235 224 aaKnown RBP3.97□□□□□ -1.77
SMC6-208ENST00000481708 COQ6Q9Y2Z9 468 aa3.97□□□□□ -1.77
SMC6-208ENST00000481708 SNCAIPQ9Y6H5 919 aa3.97□□□□□ -1.77
SMC6-208ENST00000481708 ZEB2O60315 1214 aa3.97□□□□□ -1.77
SMC6-208ENST00000481708 CKMT1AP12532 417 aa3.97□□□□□ -1.77
SMC6-208ENST00000481708 EIF2AK2P19525 551 aaKnown RBP3.97□□□□□ -1.77
SMC6-208ENST00000481708 HMGB2P26583 209 aaKnown RBP3.97□□□□□ -1.77
SMC6-208ENST00000481708 SUMO1P63165 101 aaKnown RBP3.97□□□□□ -1.77
SMC6-208ENST00000481708 WDR45BQ5MNZ6 344 aa3.97□□□□□ -1.77
SMC6-208ENST00000481708 LMBRD2Q68DH5 695 aaPredicted RBP3.97□□□□□ -1.77
SMC6-208ENST00000481708 TLDC1Q6P9B6 456 aa3.97□□□□□ -1.77
SMC6-208ENST00000481708 FAM35AQ86V20 835 aa3.97□□□□□ -1.77
SMC6-208ENST00000481708 ZNF354CQ86Y25 554 aa3.97□□□□□ -1.77
SMC6-208ENST00000481708 NKAIN3Q8N8D7 197 aa3.97□□□□□ -1.77
SMC6-208ENST00000481708 MARCH10Q8NA82 808 aaPredicted RBP3.97□□□□□ -1.77
SMC6-208ENST00000481708 RSPH1Q8WYR4 309 aa3.97□□□□□ -1.77
SMC6-208ENST00000481708 JADE3Q92613 823 aa3.97□□□□□ -1.77
SMC6-208ENST00000481708 SLC6A18Q96N87 628 aa3.97□□□□□ -1.77
SMC6-208ENST00000481708 TESK2Q96S53 571 aa3.97□□□□□ -1.77
SMC6-208ENST00000481708 PPP4R2Q9NY27 417 aa3.97□□□□□ -1.77
SMC6-208ENST00000481708 NOL7Q9UMY1 257 aaKnown RBP3.97□□□□□ -1.77
SMC6-208ENST00000481708 CYP8B1Q9UNU6 501 aa3.97□□□□□ -1.77
SMC6-208ENST00000481708 TRIM33Q9UPN9 1127 aa3.97□□□□□ -1.77
SMC6-208ENST00000481708 PHF24Q9UPV7 400 aa3.97□□□□□ -1.77
SMC6-208ENST00000481708 SPEF1Q9Y4P9 236 aa3.97□□□□□ -1.77
SMC6-208ENST00000481708 CNTNAP4Q9C0A0 1308 aa3.97□□□□□ -1.77
SMC6-208ENST00000481708 USP47Q96K76 1375 aa3.97□□□□□ -1.77
SMC6-208ENST00000481708 ERC2O15083 957 aa3.96□□□□□ -1.77
SMC6-208ENST00000481708 MBD4O95243 580 aa3.96□□□□□ -1.77
SMC6-208ENST00000481708 CT47B1P0C2W7 299 aaPredicted RBP3.96□□□□□ -1.77
SMC6-208ENST00000481708 MECP2P51608 486 aaKnown RBP3.96□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms