RNA–Protein interactions for RNA: ENST00000481260.1

RAPGEF1-207, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 1,034 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-207ENST00000481260 CCDC155Q8N6L0 562 aa12.91□□□□□ -0.34
RAPGEF1-207ENST00000481260 DBF4BQ8NFT6 615 aa12.91□□□□□ -0.34
RAPGEF1-207ENST00000481260 MYLIPQ8WY64 445 aa12.91□□□□□ -0.34
RAPGEF1-207ENST00000481260 HAS1Q92839 578 aa12.91□□□□□ -0.34
RAPGEF1-207ENST00000481260 TBC1D32Q96NH3 1257 aa12.91□□□□□ -0.34
RAPGEF1-207ENST00000481260 PPP1R16BQ96T49 567 aa12.91□□□□□ -0.34
RAPGEF1-207ENST00000481260 CDX2Q99626 313 aaPredicted RBP12.91□□□□□ -0.34
RAPGEF1-207ENST00000481260 SH2D3AQ9BRG2 576 aa12.91□□□□□ -0.34
RAPGEF1-207ENST00000481260 AZI2Q9H6S1 392 aa12.91□□□□□ -0.34
RAPGEF1-207ENST00000481260 CDHR5Q9HBB8 845 aa12.91□□□□□ -0.34
RAPGEF1-207ENST00000481260 DDX25Q9UHL0 483 aaKnown RBP12.91□□□□□ -0.34
RAPGEF1-207ENST00000481260 VAV3Q9UKW4 847 aa12.91□□□□□ -0.34
RAPGEF1-207ENST00000481260 VCANP13611 3396 aa12.9□□□□□ -0.34
RAPGEF1-207ENST00000481260 CCDC194A0A1B0GVG4 234 aa12.9□□□□□ -0.34
RAPGEF1-207ENST00000481260 EPOPA6NHQ4 379 aa12.9□□□□□ -0.34
RAPGEF1-207ENST00000481260 KIF28PB7ZC32 967 aa12.9□□□□□ -0.34
RAPGEF1-207ENST00000481260 GAS7O60861 476 aa12.9□□□□□ -0.34
RAPGEF1-207ENST00000481260 STBD1O95210 358 aa12.9□□□□□ -0.34
RAPGEF1-207ENST00000481260 MMP1P03956 469 aa12.9□□□□□ -0.34
RAPGEF1-207ENST00000481260 GHRP10912 638 aa12.9□□□□□ -0.34
RAPGEF1-207ENST00000481260 KRT2P35908 639 aa12.9□□□□□ -0.34
RAPGEF1-207ENST00000481260 LPIN1Q14693 890 aa12.9□□□□□ -0.34
RAPGEF1-207ENST00000481260 FAM26DQ5JW98 314 aa12.9□□□□□ -0.34
RAPGEF1-207ENST00000481260 ZNF746Q6NUN9 644 aaPredicted RBP12.9□□□□□ -0.34
RAPGEF1-207ENST00000481260 FAM117BQ6P1L5 589 aa12.9□□□□□ -0.34
RAPGEF1-207ENST00000481260 MTHFD1LQ6UB35 978 aa12.9□□□□□ -0.34
RAPGEF1-207ENST00000481260 DIS3L2Q8IYB7 885 aaKnown RBP12.9□□□□□ -0.34
RAPGEF1-207ENST00000481260 ATP8B4Q8TF62 1192 aa12.9□□□□□ -0.34
RAPGEF1-207ENST00000481260 AGO3Q9H9G7 860 aaKnown RBP12.9□□□□□ -0.34
RAPGEF1-207ENST00000481260 CERS4Q9HA82 394 aa12.9□□□□□ -0.34
RAPGEF1-207ENST00000481260 DISC1Q9NRI5 854 aa12.9□□□□□ -0.34
RAPGEF1-207ENST00000481260 TBC1D22BQ9NU19 505 aa12.9□□□□□ -0.34
RAPGEF1-207ENST00000481260 WRAP73Q9P2S5 460 aaPredicted RBP12.9□□□□□ -0.34
RAPGEF1-207ENST00000481260 MAFBQ9Y5Q3 323 aaPredicted RBP12.9□□□□□ -0.34
RAPGEF1-207ENST00000481260 XIRP2A4UGR9 3374 aa12.9□□□□□ -0.34
RAPGEF1-207ENST00000481260 IGSF9BQ9UPX0 1349 aa12.89□□□□□ -0.35
RAPGEF1-207ENST00000481260 RFXAPO00287 272 aa12.89□□□□□ -0.35
RAPGEF1-207ENST00000481260 CCNT1O60563 726 aaKnown RBP12.89□□□□□ -0.35
RAPGEF1-207ENST00000481260 PFKMP08237 780 aa12.89□□□□□ -0.35
RAPGEF1-207ENST00000481260 GNAT1P11488 350 aa12.89□□□□□ -0.35
RAPGEF1-207ENST00000481260 KLRC1P26715 233 aa12.89□□□□□ -0.35
RAPGEF1-207ENST00000481260 KRT76Q01546 638 aa12.89□□□□□ -0.35
RAPGEF1-207ENST00000481260 RABEP1Q15276 862 aa12.89□□□□□ -0.35
RAPGEF1-207ENST00000481260 PLEKHG4Q58EX7 1191 aa12.89□□□□□ -0.35
RAPGEF1-207ENST00000481260 CNKSR3Q6P9H4 555 aa12.89□□□□□ -0.35
RAPGEF1-207ENST00000481260 NEK8Q86SG6 692 aa12.89□□□□□ -0.35
RAPGEF1-207ENST00000481260 HERC6Q8IVU3 1022 aa12.89□□□□□ -0.35
RAPGEF1-207ENST00000481260 BANK1Q8NDB2 785 aa12.89□□□□□ -0.35
RAPGEF1-207ENST00000481260 ZNF668Q96K58 619 aaPredicted RBP12.89□□□□□ -0.35
RAPGEF1-207ENST00000481260 RIT2Q99578 217 aa12.89□□□□□ -0.35
RAPGEF1-207ENST00000481260 TEKT3Q9BXF9 490 aa12.89□□□□□ -0.35
RAPGEF1-207ENST00000481260 ZNF576Q9H609 170 aa12.89□□□□□ -0.35
RAPGEF1-207ENST00000481260 KCNMB3Q9NPA1 279 aa12.89□□□□□ -0.35
RAPGEF1-207ENST00000481260 SAMM50Q9Y512 469 aa12.89□□□□□ -0.35
RAPGEF1-207ENST00000481260 PCDHA10Q9Y5I2 948 aa12.89□□□□□ -0.35
RAPGEF1-207ENST00000481260 CDY2AQ9Y6F7 541 aa12.89□□□□□ -0.35
RAPGEF1-207ENST00000481260 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.88□□□□□ -0.35
RAPGEF1-207ENST00000481260 WDR64B1ANS9 1081 aa12.88□□□□□ -0.35
RAPGEF1-207ENST00000481260 EIF5BO60841 1220 aaKnown RBP12.88□□□□□ -0.35
RAPGEF1-207ENST00000481260 C22orf31O95567 290 aa12.88□□□□□ -0.35
RAPGEF1-207ENST00000481260 CA3P07451 260 aa12.88□□□□□ -0.35
RAPGEF1-207ENST00000481260 PSAPP07602 524 aa12.88□□□□□ -0.35
RAPGEF1-207ENST00000481260 ATP2B1P20020 1258 aa12.88□□□□□ -0.35
RAPGEF1-207ENST00000481260 PRKCEQ02156 737 aa12.88□□□□□ -0.35
RAPGEF1-207ENST00000481260 ADGRE1Q14246 886 aa12.88□□□□□ -0.35
RAPGEF1-207ENST00000481260 NBR1Q14596 966 aa12.88□□□□□ -0.35
RAPGEF1-207ENST00000481260 FAM160B1Q5W0V3 765 aa12.88□□□□□ -0.35
RAPGEF1-207ENST00000481260 KIAA0319LQ8IZA0 1049 aa12.88□□□□□ -0.35
RAPGEF1-207ENST00000481260 ZNF579Q8NAF0 562 aaKnown RBP12.88□□□□□ -0.35
RAPGEF1-207ENST00000481260 LINC01599Q8WXQ3 324 aa12.88□□□□□ -0.35
RAPGEF1-207ENST00000481260 WASF1Q92558 559 aa12.88□□□□□ -0.35
RAPGEF1-207ENST00000481260 TMX3Q96JJ7 454 aa12.88□□□□□ -0.35
RAPGEF1-207ENST00000481260 TMEM60Q9H2L4 133 aa12.88□□□□□ -0.35
RAPGEF1-207ENST00000481260 PRDM12Q9H4Q4 367 aa12.88□□□□□ -0.35
RAPGEF1-207ENST00000481260 PCDHA2Q9Y5H9 948 aa12.88□□□□□ -0.35
RAPGEF1-207ENST00000481260 A0A087WWV3 80 aa12.87□□□□□ -0.35
RAPGEF1-207ENST00000481260 HBP1O60381 514 aa12.87□□□□□ -0.35
RAPGEF1-207ENST00000481260 ACTN1P12814 892 aa12.87□□□□□ -0.35
RAPGEF1-207ENST00000481260 CLCN3P51790 818 aa12.87□□□□□ -0.35
RAPGEF1-207ENST00000481260 MRPS6P82932 125 aaKnown RBP12.87□□□□□ -0.35
RAPGEF1-207ENST00000481260 DRP2Q13474 957 aa12.87□□□□□ -0.35
RAPGEF1-207ENST00000481260 TMEM266Q2M3C6 531 aa12.87□□□□□ -0.35
RAPGEF1-207ENST00000481260 FBXO47Q5MNV8 452 aa12.87□□□□□ -0.35
RAPGEF1-207ENST00000481260 MOXD1Q6UVY6 613 aa12.87□□□□□ -0.35
RAPGEF1-207ENST00000481260 MIER3Q7Z3K6 550 aa12.87□□□□□ -0.35
RAPGEF1-207ENST00000481260 RPAINQ86UA6 219 aa12.87□□□□□ -0.35
RAPGEF1-207ENST00000481260 CKAP2LQ8IYA6 745 aa12.87□□□□□ -0.35
RAPGEF1-207ENST00000481260 SMAP1Q8IYB5 467 aaPredicted RBP12.87□□□□□ -0.35
RAPGEF1-207ENST00000481260 FAM177A1Q8N128 213 aaPredicted RBP12.87□□□□□ -0.35
RAPGEF1-207ENST00000481260 LRRC71Q8N4P6 559 aa12.87□□□□□ -0.35
RAPGEF1-207ENST00000481260 TMEM40Q8WWA1 233 aa12.87□□□□□ -0.35
RAPGEF1-207ENST00000481260 CEP89Q96ST8 783 aa12.87□□□□□ -0.35
RAPGEF1-207ENST00000481260 BACH2Q9BYV9 841 aa12.87□□□□□ -0.35
RAPGEF1-207ENST00000481260 RRN3P2A6NIE6 340 aa12.86□□□□□ -0.35
RAPGEF1-207ENST00000481260 ZBTB39O15060 712 aa12.86□□□□□ -0.35
RAPGEF1-207ENST00000481260 BAIAP3O94812 1187 aa12.86□□□□□ -0.35
RAPGEF1-207ENST00000481260 VTNP04004 478 aa12.86□□□□□ -0.35
RAPGEF1-207ENST00000481260 OATP04181 439 aa12.86□□□□□ -0.35
RAPGEF1-207ENST00000481260 XBP1P17861 261 aa12.86□□□□□ -0.35
RAPGEF1-207ENST00000481260 CD52P31358 61 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms