RNA–Protein interactions for RNA: ENST00000480923.5

VPS36-204, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-204ENST00000480923 LLPHQ9BRT6 129 aaKnown RBP22.76■■□□□ 1.23
VPS36-204ENST00000480923 FAM49AQ9H0Q0 323 aaPredicted RBP22.76■■□□□ 1.23
VPS36-204ENST00000480923 NKX2-4Q9H2Z4 354 aa22.76■■□□□ 1.23
VPS36-204ENST00000480923 UNC45AQ9H3U1 944 aa22.76■■□□□ 1.23
VPS36-204ENST00000480923 MAFBQ9Y5Q3 323 aaPredicted RBP22.76■■□□□ 1.23
VPS36-204ENST00000480923 ABHD14A-ACY1A0A1B0GW23 586 aa22.75■■□□□ 1.23
VPS36-204ENST00000480923 SLC37A4O43826 429 aa22.75■■□□□ 1.23
VPS36-204ENST00000480923 ST18O60284 1047 aa22.75■■□□□ 1.23
VPS36-204ENST00000480923 CCNT1O60563 726 aaKnown RBP22.75■■□□□ 1.23
VPS36-204ENST00000480923 PSMD10O75832 226 aa22.75■■□□□ 1.23
VPS36-204ENST00000480923 GCFC2P16383 781 aaKnown RBP22.75■■□□□ 1.23
VPS36-204ENST00000480923 SFNP31947 248 aa22.75■■□□□ 1.23
VPS36-204ENST00000480923 JAK3P52333 1124 aa22.75■■□□□ 1.23
VPS36-204ENST00000480923 WDR5P61964 334 aaKnown RBP22.75■■□□□ 1.23
VPS36-204ENST00000480923 EARS2Q5JPH6 523 aaKnown RBP22.75■■□□□ 1.23
VPS36-204ENST00000480923 FAM26DQ5JW98 314 aa22.75■■□□□ 1.23
VPS36-204ENST00000480923 RPAINQ86UA6 219 aa22.75■■□□□ 1.23
VPS36-204ENST00000480923 DIS3L2Q8IYB7 885 aaKnown RBP22.75■■□□□ 1.23
VPS36-204ENST00000480923 DBF4BQ8NFT6 615 aa22.75■■□□□ 1.23
VPS36-204ENST00000480923 ETNPPLQ8TBG4 499 aa22.75■■□□□ 1.23
VPS36-204ENST00000480923 PHOSPHO2Q8TCD6 241 aa22.75■■□□□ 1.23
VPS36-204ENST00000480923 NAP1L4Q99733 375 aaKnown RBP22.75■■□□□ 1.23
VPS36-204ENST00000480923 ZNF576Q9H609 170 aa22.75■■□□□ 1.23
VPS36-204ENST00000480923 YBX2Q9Y2T7 364 aaKnown RBP22.75■■□□□ 1.23
VPS36-204ENST00000480923 PCDHA11Q9Y5I1 949 aa22.75■■□□□ 1.23
VPS36-204ENST00000480923 FAM205CA6NFA0 338 aa22.74■■□□□ 1.23
VPS36-204ENST00000480923 EFCAB14O75071 495 aa22.74■■□□□ 1.23
VPS36-204ENST00000480923 ATP4AP20648 1035 aa22.74■■□□□ 1.23
VPS36-204ENST00000480923 ZNF484Q5JVG2 852 aa22.74■■□□□ 1.23
VPS36-204ENST00000480923 PPP4R3AQ6IN85 833 aa22.74■■□□□ 1.23
VPS36-204ENST00000480923 MTHFD1LQ6UB35 978 aa22.74■■□□□ 1.23
VPS36-204ENST00000480923 MIER3Q7Z3K6 550 aa22.74■■□□□ 1.23
VPS36-204ENST00000480923 SEPT8Q92599 483 aa22.74■■□□□ 1.23
VPS36-204ENST00000480923 STXBP5LQ9Y2K9 1186 aa22.74■■□□□ 1.23
VPS36-204ENST00000480923 PCDHA2Q9Y5H9 948 aa22.74■■□□□ 1.23
VPS36-204ENST00000480923 BTBD18B2RXH4 712 aa22.73■■□□□ 1.23
VPS36-204ENST00000480923 MARCH6O60337 910 aa22.73■■□□□ 1.23
VPS36-204ENST00000480923 CHRNA1P02708 482 aa22.73■■□□□ 1.23
VPS36-204ENST00000480923 RPLP2P05387 115 aaKnown RBP22.73■■□□□ 1.23
VPS36-204ENST00000480923 MYOGP15173 224 aa22.73■■□□□ 1.23
VPS36-204ENST00000480923 KLRC1P26715 233 aa22.73■■□□□ 1.23
VPS36-204ENST00000480923 GUCY1B3Q02153 619 aa22.73■■□□□ 1.23
VPS36-204ENST00000480923 PLEKHG4Q58EX7 1191 aa22.73■■□□□ 1.23
VPS36-204ENST00000480923 HERC6Q8IVU3 1022 aa22.73■■□□□ 1.23
VPS36-204ENST00000480923 BBXQ8WY36 941 aaPredicted RBP22.73■■□□□ 1.23
VPS36-204ENST00000480923 TNFRSF25Q93038 417 aa22.73■■□□□ 1.23
VPS36-204ENST00000480923 CDX2Q99626 313 aaPredicted RBP22.73■■□□□ 1.23
VPS36-204ENST00000480923 OSBPL7Q9BZF2 842 aa22.73■■□□□ 1.23
VPS36-204ENST00000480923 SLC28A3Q9HAS3 691 aa22.73■■□□□ 1.23
VPS36-204ENST00000480923 IGSF9BQ9UPX0 1349 aa22.73■■□□□ 1.23
VPS36-204ENST00000480923 COL1A2P08123 1366 aa22.73■■□□□ 1.23
VPS36-204ENST00000480923 KIF28PB7ZC32 967 aa22.72■■□□□ 1.23
VPS36-204ENST00000480923 M0QZ92 97 aa22.72■■□□□ 1.23
VPS36-204ENST00000480923 DEFB103AP81534 67 aa22.72■■□□□ 1.23
VPS36-204ENST00000480923 MRPS6P82932 125 aaKnown RBP22.72■■□□□ 1.23
VPS36-204ENST00000480923 HMGN5P82970 282 aaKnown RBP22.72■■□□□ 1.23
VPS36-204ENST00000480923 SAFBQ15424 915 aaKnown RBP eCLIP22.72■■□□□ 1.23
VPS36-204ENST00000480923 FAM184AQ8NB25 1140 aa22.72■■□□□ 1.23
VPS36-204ENST00000480923 C8orf76Q96K31 380 aa22.72■■□□□ 1.23
VPS36-204ENST00000480923 FAM167AQ96KS9 214 aa22.72■■□□□ 1.23
VPS36-204ENST00000480923 CDY2AQ9Y6F7 541 aa22.72■■□□□ 1.23
VPS36-204ENST00000480923 SMIM35A0A1B0GVV1 85 aa22.71■■□□□ 1.23
VPS36-204ENST00000480923 GHRP10912 638 aa22.71■■□□□ 1.23
VPS36-204ENST00000480923 MGAT3Q09327 533 aa22.71■■□□□ 1.23
VPS36-204ENST00000480923 GRIN2CQ14957 1233 aa22.71■■□□□ 1.23
VPS36-204ENST00000480923 IER5Q5VY09 327 aa22.71■■□□□ 1.23
VPS36-204ENST00000480923 RDM1Q8NG50 284 aa22.71■■□□□ 1.23
VPS36-204ENST00000480923 MYLIPQ8WY64 445 aa22.71■■□□□ 1.23
VPS36-204ENST00000480923 FAM20AQ96MK3 541 aa22.71■■□□□ 1.23
VPS36-204ENST00000480923 TBC1D32Q96NH3 1257 aa22.71■■□□□ 1.23
VPS36-204ENST00000480923 ZBED2Q9BTP6 218 aa22.71■■□□□ 1.23
VPS36-204ENST00000480923 KCNMB3Q9NPA1 279 aa22.71■■□□□ 1.23
VPS36-204ENST00000480923 TET1Q8NFU7 2136 aa22.7■■□□□ 1.23
VPS36-204ENST00000480923 OATP04181 439 aa22.7■■□□□ 1.22
VPS36-204ENST00000480923 PRKCEQ02156 737 aa22.7■■□□□ 1.22
VPS36-204ENST00000480923 TMEM62Q0P6H9 643 aa22.7■■□□□ 1.22
VPS36-204ENST00000480923 UGCGQ16739 394 aa22.7■■□□□ 1.22
VPS36-204ENST00000480923 PPP2R2DQ66LE6 453 aa22.7■■□□□ 1.22
VPS36-204ENST00000480923 TMCO2Q7Z6W1 182 aaPredicted RBP22.7■■□□□ 1.22
VPS36-204ENST00000480923 APBB2Q92870 758 aa22.7■■□□□ 1.22
VPS36-204ENST00000480923 IFIH1Q9BYX4 1025 aaKnown RBP22.7■■□□□ 1.22
VPS36-204ENST00000480923 NRBP2Q9NSY0 501 aa22.7■■□□□ 1.22
VPS36-204ENST00000480923 CEP131Q9UPN4 1083 aa22.7■■□□□ 1.22
VPS36-204ENST00000480923 TRPV2Q9Y5S1 764 aa22.7■■□□□ 1.22
VPS36-204ENST00000480923 ZBTB42B2RXF5 422 aa22.69■■□□□ 1.22
VPS36-204ENST00000480923 TLL1O43897 1013 aa22.69■■□□□ 1.22
VPS36-204ENST00000480923 ZNF862O60290 1169 aa22.69■■□□□ 1.22
VPS36-204ENST00000480923 AMHP03971 560 aa22.69■■□□□ 1.22
VPS36-204ENST00000480923 B3GNT9Q6UX72 402 aa22.69■■□□□ 1.22
VPS36-204ENST00000480923 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.69■■□□□ 1.22
VPS36-204ENST00000480923 POTEDQ86YR6 584 aa22.69■■□□□ 1.22
VPS36-204ENST00000480923 NME8Q8N427 588 aa22.69■■□□□ 1.22
VPS36-204ENST00000480923 IL27Q8NEV9 243 aa22.69■■□□□ 1.22
VPS36-204ENST00000480923 KAT6AQ92794 2004 aa22.69■■□□□ 1.22
VPS36-204ENST00000480923 TBX3O15119 743 aa22.68■■□□□ 1.22
VPS36-204ENST00000480923 BAG4O95429 457 aaKnown RBP22.68■■□□□ 1.22
VPS36-204ENST00000480923 C22orf31O95567 290 aa22.68■■□□□ 1.22
VPS36-204ENST00000480923 CA3P07451 260 aa22.68■■□□□ 1.22
VPS36-204ENST00000480923 LPIN1Q14693 890 aa22.68■■□□□ 1.22
VPS36-204ENST00000480923 FBXO47Q5MNV8 452 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms