RNA–Protein interactions for RNA: ENST00000480484.5

COMMD4-203, Transcript of COMM domain containing 4, humanhuman

TSL 1 (best)

Gene COMMD4, Length 3,225 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-203ENST00000480484 RNF41Q9H4P4 317 aaPredicted RBP11.09□□□□□ -0.63
COMMD4-203ENST00000480484 BAIAP2L1Q9UHR4 511 aa11.09□□□□□ -0.63
COMMD4-203ENST00000480484 NID2Q14112 1375 aa11.09□□□□□ -0.63
COMMD4-203ENST00000480484 PRSS47A8MTI9 375 aa11.09□□□□□ -0.63
COMMD4-203ENST00000480484 TGFB3P10600 412 aa11.09□□□□□ -0.63
COMMD4-203ENST00000480484 LMNB1P20700 586 aa11.09□□□□□ -0.63
COMMD4-203ENST00000480484 FAM228AQ86W67 206 aa11.09□□□□□ -0.63
COMMD4-203ENST00000480484 NBPF5PQ86XG9 351 aaPredicted RBP11.09□□□□□ -0.63
COMMD4-203ENST00000480484 KLHL7Q8IXQ5 586 aa11.09□□□□□ -0.63
COMMD4-203ENST00000480484 TNFRSF25Q93038 417 aa11.09□□□□□ -0.63
COMMD4-203ENST00000480484 FAXDC2Q96IV6 333 aa11.09□□□□□ -0.63
COMMD4-203ENST00000480484 CNOT6LQ96LI5 555 aaKnown RBP11.09□□□□□ -0.63
COMMD4-203ENST00000480484 NUP58Q9BVL2 599 aa11.09□□□□□ -0.63
COMMD4-203ENST00000480484 OSBPL7Q9BZF2 842 aa11.09□□□□□ -0.63
COMMD4-203ENST00000480484 MMRN2Q9H8L6 949 aa11.09□□□□□ -0.63
COMMD4-203ENST00000480484 TRPC5Q9UL62 973 aaPredicted RBP11.09□□□□□ -0.63
COMMD4-203ENST00000480484 LRRC37AA6NMS7 1700 aa11.09□□□□□ -0.63
COMMD4-203ENST00000480484 RPS8P62241 208 aaKnown RBP11.09□□□□□ -0.63
COMMD4-203ENST00000480484 ATP2C1P98194 919 aaPredicted RBP11.09□□□□□ -0.63
COMMD4-203ENST00000480484 PLCB4Q15147 1175 aa11.09□□□□□ -0.63
COMMD4-203ENST00000480484 IFIT1BQ5T764 474 aaKnown RBP11.09□□□□□ -0.63
COMMD4-203ENST00000480484 ARHGAP20Q9P2F6 1191 aa11.09□□□□□ -0.63
COMMD4-203ENST00000480484 LZTS1Q9Y250 596 aa11.09□□□□□ -0.63
COMMD4-203ENST00000480484 GMNCA6NCL1 334 aa11.08□□□□□ -0.64
COMMD4-203ENST00000480484 ITGB3BPQ13352 177 aaPredicted RBP11.08□□□□□ -0.64
COMMD4-203ENST00000480484 CASKIN2Q8WXE0 1202 aa11.08□□□□□ -0.64
COMMD4-203ENST00000480484 RNF26Q9BY78 433 aaPredicted RBP11.08□□□□□ -0.64
COMMD4-203ENST00000480484 TTYH3Q9C0H2 523 aa11.08□□□□□ -0.64
COMMD4-203ENST00000480484 THAP9Q9H5L6 903 aa11.08□□□□□ -0.64
COMMD4-203ENST00000480484 ACTR5Q9H9F9 607 aaPredicted RBP11.08□□□□□ -0.64
COMMD4-203ENST00000480484 ANAPC4Q9UJX5 808 aa11.08□□□□□ -0.64
COMMD4-203ENST00000480484 SPDYE16A6NNV3 312 aaPredicted RBP11.08□□□□□ -0.64
COMMD4-203ENST00000480484 GCOM1H8Y6P7 765 aaPredicted RBP11.08□□□□□ -0.64
COMMD4-203ENST00000480484 PPP1R12AO14974 1030 aaPredicted RBP11.08□□□□□ -0.64
COMMD4-203ENST00000480484 FTCDO95954 541 aa11.08□□□□□ -0.64
COMMD4-203ENST00000480484 MYZAPP0CAP1 466 aa11.08□□□□□ -0.64
COMMD4-203ENST00000480484 NLRP5P59047 1200 aa11.08□□□□□ -0.64
COMMD4-203ENST00000480484 ITIH3Q06033 890 aa11.08□□□□□ -0.64
COMMD4-203ENST00000480484 STK4Q13043 487 aa11.08□□□□□ -0.64
COMMD4-203ENST00000480484 MSL1Q68DK7 614 aa11.08□□□□□ -0.64
COMMD4-203ENST00000480484 RUBCNQ92622 972 aa11.08□□□□□ -0.64
COMMD4-203ENST00000480484 NGLY1Q96IV0 654 aa11.08□□□□□ -0.64
COMMD4-203ENST00000480484 GMLQ99445 158 aa11.08□□□□□ -0.64
COMMD4-203ENST00000480484 TLR10Q9BXR5 811 aa11.08□□□□□ -0.64
COMMD4-203ENST00000480484 IFRD1O00458 451 aaPredicted RBP11.07□□□□□ -0.64
COMMD4-203ENST00000480484 TIMM44O43615 452 aa11.07□□□□□ -0.64
COMMD4-203ENST00000480484 GFPT1Q06210 699 aaPredicted RBP11.07□□□□□ -0.64
COMMD4-203ENST00000480484 TROAPQ12815 778 aa11.07□□□□□ -0.64
COMMD4-203ENST00000480484 GRIK5Q16478 980 aa11.07□□□□□ -0.64
COMMD4-203ENST00000480484 TDRD12Q587J7 1177 aaKnown RBP11.07□□□□□ -0.64
COMMD4-203ENST00000480484 CCDC178Q5BJE1 867 aa11.07□□□□□ -0.64
COMMD4-203ENST00000480484 ANKRD20A8PQ5CZ79 823 aa11.07□□□□□ -0.64
COMMD4-203ENST00000480484 C6orf89Q6UWU4 347 aa11.07□□□□□ -0.64
COMMD4-203ENST00000480484 RRAGAQ7L523 313 aa11.07□□□□□ -0.64
COMMD4-203ENST00000480484 CPLX4Q7Z7G2 160 aa11.07□□□□□ -0.64
COMMD4-203ENST00000480484 SLC44A5Q8NCS7 719 aa11.07□□□□□ -0.64
COMMD4-203ENST00000480484 DYNLL2Q96FJ2 89 aa11.07□□□□□ -0.64
COMMD4-203ENST00000480484 ASB16Q96NS5 453 aa11.07□□□□□ -0.64
COMMD4-203ENST00000480484 SETDB2Q96T68 719 aa11.07□□□□□ -0.64
COMMD4-203ENST00000480484 ARFGEF1Q9Y6D6 1849 aa11.07□□□□□ -0.64
COMMD4-203ENST00000480484 ATP2B4P23634 1241 aa11.07□□□□□ -0.64
COMMD4-203ENST00000480484 SCTRP47872 440 aa11.07□□□□□ -0.64
COMMD4-203ENST00000480484 CRYMQ14894 314 aa11.07□□□□□ -0.64
COMMD4-203ENST00000480484 INF2Q27J81 1249 aa11.07□□□□□ -0.64
COMMD4-203ENST00000480484 ACCSLQ4AC99 568 aa11.07□□□□□ -0.64
COMMD4-203ENST00000480484 PPP4R4Q6NUP7 873 aa11.07□□□□□ -0.64
COMMD4-203ENST00000480484 CACNA2D3Q8IZS8 1091 aa11.07□□□□□ -0.64
COMMD4-203ENST00000480484 ARFGAP2Q8N6H7 521 aa11.07□□□□□ -0.64
COMMD4-203ENST00000480484 SLC43A3Q8NBI5 491 aa11.07□□□□□ -0.64
COMMD4-203ENST00000480484 MTMR8Q96EF0 704 aa11.07□□□□□ -0.64
COMMD4-203ENST00000480484 SEC16BQ96JE7 1060 aa11.07□□□□□ -0.64
COMMD4-203ENST00000480484 DCP1AQ9NPI6 582 aaPredicted RBP11.07□□□□□ -0.64
COMMD4-203ENST00000480484 PHF20L1A8MW92 1017 aa11.07□□□□□ -0.64
COMMD4-203ENST00000480484 TMCO5BA8MYB1 307 aa11.07□□□□□ -0.64
COMMD4-203ENST00000480484 HIBADHP31937 336 aaKnown RBP11.07□□□□□ -0.64
COMMD4-203ENST00000480484 PEX19P40855 299 aa11.07□□□□□ -0.64
COMMD4-203ENST00000480484 PPP1R7Q15435 360 aa11.07□□□□□ -0.64
COMMD4-203ENST00000480484 HIBCHQ6NVY1 386 aaPredicted RBP11.07□□□□□ -0.64
COMMD4-203ENST00000480484 JAMLQ86YT9 394 aa11.07□□□□□ -0.64
COMMD4-203ENST00000480484 CCDC50Q8IVM0 306 aa11.07□□□□□ -0.64
COMMD4-203ENST00000480484 ZNF513Q8N8E2 541 aaPredicted RBP11.07□□□□□ -0.64
COMMD4-203ENST00000480484 EPS8L1Q8TE68 723 aa11.07□□□□□ -0.64
COMMD4-203ENST00000480484 THOC1Q96FV9 657 aaKnown RBP11.07□□□□□ -0.64
COMMD4-203ENST00000480484 NLRP3Q96P20 1036 aa11.07□□□□□ -0.64
COMMD4-203ENST00000480484 NOX5Q96PH1 765 aa11.07□□□□□ -0.64
COMMD4-203ENST00000480484 DUSP9Q99956 384 aaKnown RBP11.07□□□□□ -0.64
COMMD4-203ENST00000480484 BRIP1Q9BX63 1249 aa11.07□□□□□ -0.64
COMMD4-203ENST00000480484 GDF3Q9NR23 364 aa11.07□□□□□ -0.64
COMMD4-203ENST00000480484 LEMD3Q9Y2U8 911 aa11.07□□□□□ -0.64
COMMD4-203ENST00000480484 BUB1BO60566 1050 aaPredicted RBP11.06□□□□□ -0.64
COMMD4-203ENST00000480484 BPNT1O95861 308 aa11.06□□□□□ -0.64
COMMD4-203ENST00000480484 SLURP2P0DP57 97 aa11.06□□□□□ -0.64
COMMD4-203ENST00000480484 PRLRP16471 622 aa11.06□□□□□ -0.64
COMMD4-203ENST00000480484 CTNNA1P35221 906 aaKnown RBP11.06□□□□□ -0.64
COMMD4-203ENST00000480484 MRPL12P52815 198 aaKnown RBP11.06□□□□□ -0.64
COMMD4-203ENST00000480484 DRP2Q13474 957 aa11.06□□□□□ -0.64
COMMD4-203ENST00000480484 ANKRD40Q6AI12 368 aa11.06□□□□□ -0.64
COMMD4-203ENST00000480484 TTI2Q6NXR4 508 aa11.06□□□□□ -0.64
COMMD4-203ENST00000480484 ZNF572Q7Z3I7 529 aaPredicted RBP11.06□□□□□ -0.64
COMMD4-203ENST00000480484 NARFQ9UHQ1 456 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms