RNA–Protein interactions for RNA: ENST00000480067.1

CLDN11-205, Transcript of claudin 11, humanhuman

TSL 1 (best)

Gene CLDN11, Length 1,589 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-205ENST00000480067 TRPC6Q9Y210 931 aa12.53□□□□□ -0.4
CLDN11-205ENST00000480067 IGSF9BQ9UPX0 1349 aa12.53□□□□□ -0.4
CLDN11-205ENST00000480067 KDM3AQ9Y4C1 1321 aa12.53□□□□□ -0.4
CLDN11-205ENST00000480067 A0A1W2PQ45 241 aaPredicted RBP12.52□□□□□ -0.4
CLDN11-205ENST00000480067 A0A1W2PQY0 241 aa12.52□□□□□ -0.4
CLDN11-205ENST00000480067 POTEB3A0JP26 581 aa12.52□□□□□ -0.4
CLDN11-205ENST00000480067 CCDC85CA6NKD9 419 aa12.52□□□□□ -0.4
CLDN11-205ENST00000480067 DDX11L8A8MPP1 907 aa12.52□□□□□ -0.4
CLDN11-205ENST00000480067 GOLGA6L22H0YM25 854 aa12.52□□□□□ -0.4
CLDN11-205ENST00000480067 SLC26A4O43511 780 aa12.52□□□□□ -0.4
CLDN11-205ENST00000480067 ZNF862O60290 1169 aa12.52□□□□□ -0.4
CLDN11-205ENST00000480067 PRPF40AO75400 957 aaKnown RBP12.52□□□□□ -0.4
CLDN11-205ENST00000480067 EN2P19622 333 aaPredicted RBP12.52□□□□□ -0.4
CLDN11-205ENST00000480067 MUTP22033 750 aa12.52□□□□□ -0.4
CLDN11-205ENST00000480067 PSEN2P49810 448 aa12.52□□□□□ -0.4
CLDN11-205ENST00000480067 PRKCEQ02156 737 aa12.52□□□□□ -0.4
CLDN11-205ENST00000480067 XKR3Q5GH77 459 aa12.52□□□□□ -0.4
CLDN11-205ENST00000480067 POTEBQ6S5H4 581 aa12.52□□□□□ -0.4
CLDN11-205ENST00000480067 OTUD6AQ7L8S5 288 aa12.52□□□□□ -0.4
CLDN11-205ENST00000480067 C7orf31Q8N865 590 aa12.52□□□□□ -0.4
CLDN11-205ENST00000480067 FAM167AQ96KS9 214 aa12.52□□□□□ -0.4
CLDN11-205ENST00000480067 PLIN2Q99541 437 aa12.52□□□□□ -0.4
CLDN11-205ENST00000480067 PANK2Q9BZ23 570 aa12.52□□□□□ -0.4
CLDN11-205ENST00000480067 SENP6Q9GZR1 1112 aaPredicted RBP12.52□□□□□ -0.4
CLDN11-205ENST00000480067 STARD7Q9NQZ5 370 aa12.52□□□□□ -0.4
CLDN11-205ENST00000480067 DDX19AQ9NUU7 478 aaKnown RBP12.52□□□□□ -0.4
CLDN11-205ENST00000480067 WRAP73Q9P2S5 460 aaPredicted RBP12.52□□□□□ -0.4
CLDN11-205ENST00000480067 DNM3Q9UQ16 869 aa12.52□□□□□ -0.4
CLDN11-205ENST00000480067 KIAA0100Q14667 2235 aaKnown RBP12.52□□□□□ -0.41
CLDN11-205ENST00000480067 A0A1W2PQ27 194 aa12.52□□□□□ -0.41
CLDN11-205ENST00000480067 A0A1W2PQ64 194 aa12.52□□□□□ -0.41
CLDN11-205ENST00000480067 A0A1W2PQD8 194 aa12.52□□□□□ -0.41
CLDN11-205ENST00000480067 LYPLA2O95372 231 aa12.52□□□□□ -0.41
CLDN11-205ENST00000480067 OATP04181 439 aa12.52□□□□□ -0.41
CLDN11-205ENST00000480067 XRCC6P12956 609 aaKnown RBP eCLIP12.52□□□□□ -0.41
CLDN11-205ENST00000480067 ATP4AP20648 1035 aa12.52□□□□□ -0.41
CLDN11-205ENST00000480067 YWHABP31946 246 aaKnown RBP12.52□□□□□ -0.41
CLDN11-205ENST00000480067 PSMC6P62333 389 aa12.52□□□□□ -0.41
CLDN11-205ENST00000480067 ITGA7Q13683 1181 aa12.52□□□□□ -0.41
CLDN11-205ENST00000480067 KARSQ15046 597 aaKnown RBP12.52□□□□□ -0.41
CLDN11-205ENST00000480067 PLCB4Q15147 1175 aa12.52□□□□□ -0.41
CLDN11-205ENST00000480067 ECM1Q16610 540 aa12.52□□□□□ -0.41
CLDN11-205ENST00000480067 NBPF20Q3BBV1 942 aa12.52□□□□□ -0.41
CLDN11-205ENST00000480067 RRAGBQ5VZM2 374 aa12.52□□□□□ -0.41
CLDN11-205ENST00000480067 RESP18Q5W5W9 173 aa12.52□□□□□ -0.41
CLDN11-205ENST00000480067 POTEGQ6S5H5 508 aa12.52□□□□□ -0.41
CLDN11-205ENST00000480067 KCTD17Q8N5Z5 321 aa12.52□□□□□ -0.41
CLDN11-205ENST00000480067 TMEM87AQ8NBN3 555 aa12.52□□□□□ -0.41
CLDN11-205ENST00000480067 ATP8B4Q8TF62 1192 aa12.52□□□□□ -0.41
CLDN11-205ENST00000480067 BBXQ8WY36 941 aaPredicted RBP12.52□□□□□ -0.41
CLDN11-205ENST00000480067 SEPT9Q9UHD8 586 aaPredicted RBP12.52□□□□□ -0.41
CLDN11-205ENST00000480067 A0A087WWV3 80 aa12.51□□□□□ -0.41
CLDN11-205ENST00000480067 HAS3O00219 553 aa12.51□□□□□ -0.41
CLDN11-205ENST00000480067 HBP1O60381 514 aa12.51□□□□□ -0.41
CLDN11-205ENST00000480067 MNX1P50219 401 aaPredicted RBP12.51□□□□□ -0.41
CLDN11-205ENST00000480067 FAM47CQ5HY64 1035 aa12.51□□□□□ -0.41
CLDN11-205ENST00000480067 HYIQ5T013 277 aa12.51□□□□□ -0.41
CLDN11-205ENST00000480067 CCDC73Q6ZRK6 1079 aa12.51□□□□□ -0.41
CLDN11-205ENST00000480067 NECAB2Q7Z6G3 386 aa12.51□□□□□ -0.41
CLDN11-205ENST00000480067 PDILTQ8N807 584 aa12.51□□□□□ -0.41
CLDN11-205ENST00000480067 FSIP1Q8NA03 581 aa12.51□□□□□ -0.41
CLDN11-205ENST00000480067 PIGOQ8TEQ8 1089 aa12.51□□□□□ -0.41
CLDN11-205ENST00000480067 MRPS27Q92552 414 aaKnown RBP12.51□□□□□ -0.41
CLDN11-205ENST00000480067 PAWRQ96IZ0 340 aaKnown RBP12.51□□□□□ -0.41
CLDN11-205ENST00000480067 CCDC43Q96MW1 224 aaKnown RBP12.51□□□□□ -0.41
CLDN11-205ENST00000480067 KCNH3Q9ULD8 1083 aa12.51□□□□□ -0.41
CLDN11-205ENST00000480067 DOCK5Q9H7D0 1870 aa12.51□□□□□ -0.41
CLDN11-205ENST00000480067 MYH15Q9Y2K3 1946 aa12.5□□□□□ -0.41
CLDN11-205ENST00000480067 A0A0U1RQG5 324 aaPredicted RBP12.5□□□□□ -0.41
CLDN11-205ENST00000480067 A0A1B0GVL5 298 aa12.5□□□□□ -0.41
CLDN11-205ENST00000480067 ZBTB39O15060 712 aa12.5□□□□□ -0.41
CLDN11-205ENST00000480067 GNAT1P11488 350 aa12.5□□□□□ -0.41
CLDN11-205ENST00000480067 INSRRP14616 1297 aa12.5□□□□□ -0.41
CLDN11-205ENST00000480067 PLCG1P19174 1290 aa12.5□□□□□ -0.41
CLDN11-205ENST00000480067 PPFIA1Q13136 1202 aa12.5□□□□□ -0.41
CLDN11-205ENST00000480067 GRB10Q13322 594 aa12.5□□□□□ -0.41
CLDN11-205ENST00000480067 NFRKBQ6P4R8 1299 aa12.5□□□□□ -0.41
CLDN11-205ENST00000480067 ANO5Q75V66 913 aa12.5□□□□□ -0.41
CLDN11-205ENST00000480067 IQUBQ8NA54 791 aa12.5□□□□□ -0.41
CLDN11-205ENST00000480067 DIS3LQ8TF46 1054 aaKnown RBP12.5□□□□□ -0.41
CLDN11-205ENST00000480067 CEP170P1Q96L14 293 aa12.5□□□□□ -0.41
CLDN11-205ENST00000480067 PNMA5Q96PV4 448 aa12.5□□□□□ -0.41
CLDN11-205ENST00000480067 PYM1Q9BRP8 204 aaKnown RBP12.5□□□□□ -0.41
CLDN11-205ENST00000480067 NIFKQ9BYG3 293 aaKnown RBP12.5□□□□□ -0.41
CLDN11-205ENST00000480067 SEZ6LQ9BYH1 1024 aa12.5□□□□□ -0.41
CLDN11-205ENST00000480067 C11orf49Q9H6J7 331 aa12.5□□□□□ -0.41
CLDN11-205ENST00000480067 ANKEF1Q9NU02 776 aa12.5□□□□□ -0.41
CLDN11-205ENST00000480067 NRCAMQ92823 1304 aa12.49□□□□□ -0.41
CLDN11-205ENST00000480067 TMEM150BA6NC51 233 aa12.49□□□□□ -0.41
CLDN11-205ENST00000480067 RRN3P2A6NIE6 340 aa12.49□□□□□ -0.41
CLDN11-205ENST00000480067 POLR2DO15514 142 aaKnown RBP12.49□□□□□ -0.41
CLDN11-205ENST00000480067 GADD45BO75293 160 aaPredicted RBP12.49□□□□□ -0.41
CLDN11-205ENST00000480067 STBD1O95210 358 aa12.49□□□□□ -0.41
CLDN11-205ENST00000480067 SMIM10L2AP0DMW4 78 aa12.49□□□□□ -0.41
CLDN11-205ENST00000480067 SMIM10L2BP0DMW5 78 aa12.49□□□□□ -0.41
CLDN11-205ENST00000480067 COL6A1P12109 1028 aa12.49□□□□□ -0.41
CLDN11-205ENST00000480067 PFKFB1P16118 471 aa12.49□□□□□ -0.41
CLDN11-205ENST00000480067 STAT6P42226 847 aa12.49□□□□□ -0.41
CLDN11-205ENST00000480067 UBE2HP62256 183 aa12.49□□□□□ -0.41
CLDN11-205ENST00000480067 IGBP1P78318 339 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms