RNA–Protein interactions for RNA: ENST00000480022.1

CHD6-208, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 2,829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-208ENST00000480022 VIMP08670 466 aaKnown RBP11.86□□□□□ -0.51
CHD6-208ENST00000480022 EEF1GP26641 437 aaKnown RBP11.86□□□□□ -0.51
CHD6-208ENST00000480022 TRADDQ15628 312 aa11.86□□□□□ -0.51
CHD6-208ENST00000480022 UAP1Q16222 522 aaPredicted RBP11.86□□□□□ -0.51
CHD6-208ENST00000480022 KIAA0753Q2KHM9 967 aa11.86□□□□□ -0.51
CHD6-208ENST00000480022 MFSD14BQ5SR56 506 aa11.86□□□□□ -0.51
CHD6-208ENST00000480022 APBB1IPQ7Z5R6 666 aaPredicted RBP11.86□□□□□ -0.51
CHD6-208ENST00000480022 IRF2BP1Q8IU81 584 aa11.86□□□□□ -0.51
CHD6-208ENST00000480022 CERS5Q8N5B7 392 aa11.86□□□□□ -0.51
CHD6-208ENST00000480022 EIF1ADQ8N9N8 165 aaKnown RBP11.86□□□□□ -0.51
CHD6-208ENST00000480022 SUDS3Q9H7L9 328 aaPredicted RBP11.86□□□□□ -0.51
CHD6-208ENST00000480022 ZNF541Q9H0D2 1346 aa11.86□□□□□ -0.51
CHD6-208ENST00000480022 STK36Q9NRP7 1315 aa11.86□□□□□ -0.51
CHD6-208ENST00000480022 SPDYE5A6NIY4 337 aa11.85□□□□□ -0.51
CHD6-208ENST00000480022 GOLGA8AA7E2F4 631 aa11.85□□□□□ -0.51
CHD6-208ENST00000480022 UBE2Q2LH0YL09 131 aa11.85□□□□□ -0.51
CHD6-208ENST00000480022 ZBTB43O43298 467 aa11.85□□□□□ -0.51
CHD6-208ENST00000480022 VIL1P09327 827 aaKnown RBP11.85□□□□□ -0.51
CHD6-208ENST00000480022 FAM163BP0C2L3 166 aa11.85□□□□□ -0.51
CHD6-208ENST00000480022 MYBL1P10243 752 aa11.85□□□□□ -0.51
CHD6-208ENST00000480022 EIF6P56537 245 aaKnown RBP11.85□□□□□ -0.51
CHD6-208ENST00000480022 NCALDP61601 193 aa11.85□□□□□ -0.51
CHD6-208ENST00000480022 USP4Q13107 963 aa11.85□□□□□ -0.51
CHD6-208ENST00000480022 LBRQ14739 615 aaKnown RBP11.85□□□□□ -0.51
CHD6-208ENST00000480022 GRIK5Q16478 980 aa11.85□□□□□ -0.51
CHD6-208ENST00000480022 TRIM68Q6AZZ1 485 aa11.85□□□□□ -0.51
CHD6-208ENST00000480022 CIAPIN1Q6FI81 312 aa11.85□□□□□ -0.51
CHD6-208ENST00000480022 PIGWQ7Z7B1 504 aa11.85□□□□□ -0.51
CHD6-208ENST00000480022 TBC1D5Q92609 795 aa11.85□□□□□ -0.51
CHD6-208ENST00000480022 STAMQ92783 540 aa11.85□□□□□ -0.51
CHD6-208ENST00000480022 SYMPKQ92797 1274 aaKnown RBP11.85□□□□□ -0.51
CHD6-208ENST00000480022 BICD1Q96G01 975 aa11.85□□□□□ -0.51
CHD6-208ENST00000480022 ZNF317Q96PQ6 595 aaPredicted RBP11.85□□□□□ -0.51
CHD6-208ENST00000480022 MTA3Q9BTC8 594 aa11.85□□□□□ -0.51
CHD6-208ENST00000480022 ISCUQ9H1K1 167 aa11.85□□□□□ -0.51
CHD6-208ENST00000480022 PIDD1Q9HB75 910 aa11.85□□□□□ -0.51
CHD6-208ENST00000480022 SAMD15Q9P1V8 674 aa11.85□□□□□ -0.51
CHD6-208ENST00000480022 ABCF2Q9UG63 623 aa11.85□□□□□ -0.51
CHD6-208ENST00000480022 IGF2BP3O00425 579 aaKnown RBP eCLIP11.85□□□□□ -0.51
CHD6-208ENST00000480022 FOXP2O15409 715 aa11.85□□□□□ -0.51
CHD6-208ENST00000480022 LACTBP83111 547 aaPredicted RBP11.85□□□□□ -0.51
CHD6-208ENST00000480022 ATP11AP98196 1134 aa11.85□□□□□ -0.51
CHD6-208ENST00000480022 ANO7Q6IWH7 933 aa11.85□□□□□ -0.51
CHD6-208ENST00000480022 ATL2Q8NHH9 583 aa11.85□□□□□ -0.51
CHD6-208ENST00000480022 DTNBP1Q96EV8 351 aa11.85□□□□□ -0.51
CHD6-208ENST00000480022 BLZF1Q9H2G9 400 aa11.85□□□□□ -0.51
CHD6-208ENST00000480022 KCNJ14Q9UNX9 436 aa11.85□□□□□ -0.51
CHD6-208ENST00000480022 PRDX5P30044 214 aa11.84□□□□□ -0.51
CHD6-208ENST00000480022 MTMR3Q13615 1198 aa11.84□□□□□ -0.51
CHD6-208ENST00000480022 SGSM1Q2NKQ1 1148 aa11.84□□□□□ -0.51
CHD6-208ENST00000480022 ZNF658Q5TYW1 1059 aaPredicted RBP11.84□□□□□ -0.51
CHD6-208ENST00000480022 RSBN1LQ6PCB5 846 aaPredicted RBP11.84□□□□□ -0.51
CHD6-208ENST00000480022 ZCWPW1Q9H0M4 648 aa11.84□□□□□ -0.51
CHD6-208ENST00000480022 ARHGEF10LQ9HCE6 1279 aa11.84□□□□□ -0.51
CHD6-208ENST00000480022 A0A1B0GVG6 124 aa11.84□□□□□ -0.51
CHD6-208ENST00000480022 GRID2IPA4D2P6 1211 aa11.84□□□□□ -0.51
CHD6-208ENST00000480022 ZSCAN9O15535 394 aaPredicted RBP11.84□□□□□ -0.51
CHD6-208ENST00000480022 RAD51CO43502 376 aa11.84□□□□□ -0.51
CHD6-208ENST00000480022 RARAP10276 462 aa11.84□□□□□ -0.51
CHD6-208ENST00000480022 ZNF131P52739 623 aa11.84□□□□□ -0.51
CHD6-208ENST00000480022 FKBP1AP62942 108 aaKnown RBP11.84□□□□□ -0.51
CHD6-208ENST00000480022 TNNC1P63316 161 aa11.84□□□□□ -0.51
CHD6-208ENST00000480022 CTDSPL2Q05D32 466 aa11.84□□□□□ -0.51
CHD6-208ENST00000480022 TNIP1Q15025 636 aa11.84□□□□□ -0.51
CHD6-208ENST00000480022 RBM26Q5T8P6 1007 aaKnown RBP11.84□□□□□ -0.51
CHD6-208ENST00000480022 TMCO4Q5TGY1 634 aa11.84□□□□□ -0.51
CHD6-208ENST00000480022 PLEKHG4BQ96PX9 1271 aa11.84□□□□□ -0.51
CHD6-208ENST00000480022 ECT2Q9H8V3 914 aa11.84□□□□□ -0.51
CHD6-208ENST00000480022 EXOC1Q9NV70 894 aa11.84□□□□□ -0.51
CHD6-208ENST00000480022 LRP2BPQ9P2M1 347 aa11.84□□□□□ -0.51
CHD6-208ENST00000480022 MAGEC2Q9UBF1 373 aaPredicted RBP11.84□□□□□ -0.51
CHD6-208ENST00000480022 A8MUI8 341 aa11.83□□□□□ -0.52
CHD6-208ENST00000480022 DCDC2CA8MYV0 355 aa11.83□□□□□ -0.52
CHD6-208ENST00000480022 UBOX5O94941 541 aa11.83□□□□□ -0.52
CHD6-208ENST00000480022 FMNL1O95466 1100 aaPredicted RBP11.83□□□□□ -0.52
CHD6-208ENST00000480022 DYNC1I2Q13409 638 aaKnown RBP11.83□□□□□ -0.52
CHD6-208ENST00000480022 CUL1Q13616 776 aa11.83□□□□□ -0.52
CHD6-208ENST00000480022 KLHDC7AQ5VTJ3 777 aa11.83□□□□□ -0.52
CHD6-208ENST00000480022 MDM1Q8TC05 714 aa11.83□□□□□ -0.52
CHD6-208ENST00000480022 KCNV2Q8TDN2 545 aa11.83□□□□□ -0.52
CHD6-208ENST00000480022 UBLCP1Q8WVY7 318 aaPredicted RBP11.83□□□□□ -0.52
CHD6-208ENST00000480022 PCMTD1Q96MG8 357 aaPredicted RBP11.83□□□□□ -0.52
CHD6-208ENST00000480022 INCENPQ9NQS7 918 aa11.83□□□□□ -0.52
CHD6-208ENST00000480022 ADAM22Q9P0K1 906 aa11.83□□□□□ -0.52
CHD6-208ENST00000480022 SCN9AQ15858 1988 aa11.83□□□□□ -0.52
CHD6-208ENST00000480022 PDLIM1O00151 329 aa11.83□□□□□ -0.52
CHD6-208ENST00000480022 IDH1O75874 414 aaKnown RBP11.83□□□□□ -0.52
CHD6-208ENST00000480022 FLOT1O75955 427 aa11.83□□□□□ -0.52
CHD6-208ENST00000480022 PLEKP08567 350 aaPredicted RBP11.83□□□□□ -0.52
CHD6-208ENST00000480022 KIF11P52732 1056 aa11.83□□□□□ -0.52
CHD6-208ENST00000480022 NR5A1Q13285 461 aa11.83□□□□□ -0.52
CHD6-208ENST00000480022 ADAM9Q13443 819 aa11.83□□□□□ -0.52
CHD6-208ENST00000480022 KRT71Q3SY84 523 aa11.83□□□□□ -0.52
CHD6-208ENST00000480022 KLHL29Q96CT2 875 aa11.83□□□□□ -0.52
CHD6-208ENST00000480022 NOX5Q96PH1 765 aa11.83□□□□□ -0.52
CHD6-208ENST00000480022 ELAC2Q9BQ52 826 aaKnown RBP11.83□□□□□ -0.52
CHD6-208ENST00000480022 UBAC1Q9BSL1 405 aa11.83□□□□□ -0.52
CHD6-208ENST00000480022 THAP9Q9H5L6 903 aa11.83□□□□□ -0.52
CHD6-208ENST00000480022 FAM217BQ9NTX9 383 aaPredicted RBP11.83□□□□□ -0.52
CHD6-208ENST00000480022 ABCF3Q9NUQ8 709 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms