RNA–Protein interactions for RNA: ENST00000479868.6

SEC13-216, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC13, Length 2,374 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-216ENST00000479868 TYW1Q9NV66 732 aaKnown RBP14.33□□□□□ -0.12
SEC13-216ENST00000479868 ARGLU1Q9NWB6 273 aaPredicted RBP14.33□□□□□ -0.12
SEC13-216ENST00000479868 MYH11P35749 1972 aa14.32□□□□□ -0.12
SEC13-216ENST00000479868 CALUO43852 315 aaPredicted RBP14.32□□□□□ -0.12
SEC13-216ENST00000479868 TLR2O60603 784 aa14.32□□□□□ -0.12
SEC13-216ENST00000479868 FLOT1O75955 427 aa14.32□□□□□ -0.12
SEC13-216ENST00000479868 AKAP3O75969 853 aa14.32□□□□□ -0.12
SEC13-216ENST00000479868 FAM13AO94988 1023 aa14.32□□□□□ -0.12
SEC13-216ENST00000479868 LCA5LO95447 670 aa14.32□□□□□ -0.12
SEC13-216ENST00000479868 NR3C1P04150 777 aa14.32□□□□□ -0.12
SEC13-216ENST00000479868 VCAM1P19320 739 aa14.32□□□□□ -0.12
SEC13-216ENST00000479868 NMT1P30419 496 aaKnown RBP14.32□□□□□ -0.12
SEC13-216ENST00000479868 EPHA7Q15375 998 aa14.32□□□□□ -0.12
SEC13-216ENST00000479868 WHAMMP3Q1A5X7 153 aa14.32□□□□□ -0.12
SEC13-216ENST00000479868 ASTE1Q2TB18 679 aaPredicted RBP14.32□□□□□ -0.12
SEC13-216ENST00000479868 NBPF12Q5TAG4 269 aaPredicted RBP14.32□□□□□ -0.12
SEC13-216ENST00000479868 TRAPPC11Q7Z392 1133 aa14.32□□□□□ -0.12
SEC13-216ENST00000479868 MYCT1Q8N699 235 aa14.32□□□□□ -0.12
SEC13-216ENST00000479868 LXNQ9BS40 222 aa14.32□□□□□ -0.12
SEC13-216ENST00000479868 ARMCX3Q9UH62 379 aaPredicted RBP14.32□□□□□ -0.12
SEC13-216ENST00000479868 CNOT7Q9UIV1 285 aaKnown RBP14.32□□□□□ -0.12
SEC13-216ENST00000479868 PCDHA13Q9Y5I0 950 aa14.32□□□□□ -0.12
SEC13-216ENST00000479868 GJA3Q9Y6H8 435 aa14.32□□□□□ -0.12
SEC13-216ENST00000479868 FRMPD4Q14CM0 1322 aa14.32□□□□□ -0.12
SEC13-216ENST00000479868 CLIC2O15247 247 aa14.32□□□□□ -0.12
SEC13-216ENST00000479868 TGFB1I1O43294 461 aa14.32□□□□□ -0.12
SEC13-216ENST00000479868 AKR1B10O60218 316 aa14.32□□□□□ -0.12
SEC13-216ENST00000479868 GAP43P17677 238 aa14.32□□□□□ -0.12
SEC13-216ENST00000479868 CASP4P49662 377 aa14.32□□□□□ -0.12
SEC13-216ENST00000479868 KIF5AQ12840 1032 aa14.32□□□□□ -0.12
SEC13-216ENST00000479868 ZC2HC1CQ53FD0 456 aaPredicted RBP14.32□□□□□ -0.12
SEC13-216ENST00000479868 FRMD5Q7Z6J6 570 aa14.32□□□□□ -0.12
SEC13-216ENST00000479868 EHBP1Q8NDI1 1231 aa14.32□□□□□ -0.12
SEC13-216ENST00000479868 NACC1Q96RE7 527 aa14.32□□□□□ -0.12
SEC13-216ENST00000479868 FIZ1Q96SL8 496 aa14.32□□□□□ -0.12
SEC13-216ENST00000479868 RIT2Q99578 217 aa14.32□□□□□ -0.12
SEC13-216ENST00000479868 MTFR1LQ9H019 292 aa14.32□□□□□ -0.12
SEC13-216ENST00000479868 ZMYM2Q9UBW7 1377 aa14.32□□□□□ -0.12
SEC13-216ENST00000479868 MYH10P35580 1976 aa14.31□□□□□ -0.12
SEC13-216ENST00000479868 SEC31AO94979 1220 aaKnown RBP14.31□□□□□ -0.12
SEC13-216ENST00000479868 ZRANB2O95218 330 aaKnown RBP eCLIP14.31□□□□□ -0.12
SEC13-216ENST00000479868 MUTP22033 750 aa14.31□□□□□ -0.12
SEC13-216ENST00000479868 EPS15P42566 896 aa14.31□□□□□ -0.12
SEC13-216ENST00000479868 TMCO3Q6UWJ1 677 aa14.31□□□□□ -0.12
SEC13-216ENST00000479868 ARHGAP27Q6ZUM4 889 aa14.31□□□□□ -0.12
SEC13-216ENST00000479868 ANKZF1Q9H8Y5 726 aa14.31□□□□□ -0.12
SEC13-216ENST00000479868 PARVGQ9HBI0 331 aa14.31□□□□□ -0.12
SEC13-216ENST00000479868 FAM53CQ9NYF3 392 aa14.31□□□□□ -0.12
SEC13-216ENST00000479868 FHOD1Q9Y613 1164 aa14.31□□□□□ -0.12
SEC13-216ENST00000479868 SRGAP2O75044 1071 aa14.31□□□□□ -0.12
SEC13-216ENST00000479868 BCRP11274 1271 aa14.31□□□□□ -0.12
SEC13-216ENST00000479868 MRPS9P82933 396 aaKnown RBP14.31□□□□□ -0.12
SEC13-216ENST00000479868 GHRHRQ02643 423 aa14.31□□□□□ -0.12
SEC13-216ENST00000479868 GFPT1Q06210 699 aaPredicted RBP14.31□□□□□ -0.12
SEC13-216ENST00000479868 TDRD12Q587J7 1177 aaKnown RBP14.31□□□□□ -0.12
SEC13-216ENST00000479868 PAPD7Q5XG87 772 aaKnown RBP14.31□□□□□ -0.12
SEC13-216ENST00000479868 MCF2L2Q86YR7 1114 aa14.31□□□□□ -0.12
SEC13-216ENST00000479868 KSR1Q8IVT5 923 aa14.31□□□□□ -0.12
SEC13-216ENST00000479868 SYTL5Q8TDW5 730 aaPredicted RBP14.31□□□□□ -0.12
SEC13-216ENST00000479868 SECISBP2LQ93073 1101 aaKnown RBP14.31□□□□□ -0.12
SEC13-216ENST00000479868 TSGA10Q9BZW7 698 aa14.31□□□□□ -0.12
SEC13-216ENST00000479868 GANQ9H2C0 597 aa14.31□□□□□ -0.12
SEC13-216ENST00000479868 PPP1R9AQ9ULJ8 1098 aa14.31□□□□□ -0.12
SEC13-216ENST00000479868 PARP14Q460N5 1801 aa14.3□□□□□ -0.12
SEC13-216ENST00000479868 CTAGE15A4D2H0 777 aa14.3□□□□□ -0.12
SEC13-216ENST00000479868 EIF3DO15371 548 aaKnown RBP eCLIP14.3□□□□□ -0.12
SEC13-216ENST00000479868 DHX15O43143 795 aaKnown RBP14.3□□□□□ -0.12
SEC13-216ENST00000479868 CTAGE8P0CG41 777 aa14.3□□□□□ -0.12
SEC13-216ENST00000479868 ACTN1P12814 892 aa14.3□□□□□ -0.12
SEC13-216ENST00000479868 ZNF131P52739 623 aa14.3□□□□□ -0.12
SEC13-216ENST00000479868 ITGB3BPQ13352 177 aaPredicted RBP14.3□□□□□ -0.12
SEC13-216ENST00000479868 MAPK8IP2Q13387 824 aaPredicted RBP14.3□□□□□ -0.12
SEC13-216ENST00000479868 TKFCQ3LXA3 575 aa14.3□□□□□ -0.12
SEC13-216ENST00000479868 SFMBT2Q5VUG0 894 aa14.3□□□□□ -0.12
SEC13-216ENST00000479868 DPY19L2P1Q6NXN4 242 aa14.3□□□□□ -0.12
SEC13-216ENST00000479868 CTAGE6Q86UF2 777 aa14.3□□□□□ -0.12
SEC13-216ENST00000479868 CTAGE4Q8IX94 777 aa14.3□□□□□ -0.12
SEC13-216ENST00000479868 WNK4Q96J92 1243 aa14.3□□□□□ -0.12
SEC13-216ENST00000479868 RPAP3Q9H6T3 665 aaPredicted RBP14.3□□□□□ -0.12
SEC13-216ENST00000479868 FZD1Q9UP38 647 aa14.3□□□□□ -0.12
SEC13-216ENST00000479868 SAR1BQ9Y6B6 198 aa14.3□□□□□ -0.12
SEC13-216ENST00000479868 LOXHD1Q8IVV2 1947 aa14.3□□□□□ -0.12
SEC13-216ENST00000479868 DOCK1Q14185 1865 aa14.3□□□□□ -0.12
SEC13-216ENST00000479868 SSU72P8A0A1W2PR75 194 aa14.3□□□□□ -0.12
SEC13-216ENST00000479868 AFPP02771 609 aaKnown RBP14.3□□□□□ -0.12
SEC13-216ENST00000479868 XRCC5P13010 732 aaKnown RBP14.3□□□□□ -0.12
SEC13-216ENST00000479868 SLC9A1P19634 815 aa14.3□□□□□ -0.12
SEC13-216ENST00000479868 RPS6P62753 249 aaKnown RBP14.3□□□□□ -0.12
SEC13-216ENST00000479868 SPP2Q13103 211 aa14.3□□□□□ -0.12
SEC13-216ENST00000479868 DCAF17Q5H9S7 520 aaPredicted RBP14.3□□□□□ -0.12
SEC13-216ENST00000479868 PRAMEF18Q5VWM3 479 aa14.3□□□□□ -0.12
SEC13-216ENST00000479868 PCNX4Q63HM2 1172 aa14.3□□□□□ -0.12
SEC13-216ENST00000479868 SYN2Q92777 582 aaPredicted RBP14.3□□□□□ -0.12
SEC13-216ENST00000479868 TAAR1Q96RJ0 339 aa14.3□□□□□ -0.12
SEC13-216ENST00000479868 MLXIPQ9HAP2 919 aa14.3□□□□□ -0.12
SEC13-216ENST00000479868 UBIAD1Q9Y5Z9 338 aa14.3□□□□□ -0.12
SEC13-216ENST00000479868 CAPN6Q9Y6Q1 641 aa14.3□□□□□ -0.12
SEC13-216ENST00000479868 FZD9O00144 591 aa14.29□□□□□ -0.12
SEC13-216ENST00000479868 USO1O60763 962 aaKnown RBP14.29□□□□□ -0.12
SEC13-216ENST00000479868 PNMA6AP0CW24 399 aaPredicted RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms