RNA–Protein interactions for RNA: ENST00000479544.6

USP42-206, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 1 (best)

Gene USP42, Length 4,286 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-206ENST00000479544 GLG1Q92896 1179 aa14.64□□□□□ -0.07
USP42-206ENST00000479544 PITPNM3Q9BZ71 974 aa14.64□□□□□ -0.07
USP42-206ENST00000479544 PARP2Q9UGN5 583 aa14.64□□□□□ -0.07
USP42-206ENST00000479544 THRAP3Q9Y2W1 955 aaKnown RBP14.64□□□□□ -0.07
USP42-206ENST00000479544 PASKQ96RG2 1323 aa14.64□□□□□ -0.07
USP42-206ENST00000479544 RFX7Q2KHR2 1363 aa14.64□□□□□ -0.07
USP42-206ENST00000479544 TCP11X1B4DZS4 312 aa14.64□□□□□ -0.07
USP42-206ENST00000479544 PDE6CP51160 858 aa14.64□□□□□ -0.07
USP42-206ENST00000479544 PDXDC1Q6P996 788 aa14.64□□□□□ -0.07
USP42-206ENST00000479544 CROCCP2Q86T23 111 aa14.64□□□□□ -0.07
USP42-206ENST00000479544 FAM178BQ8IXR5 827 aa14.64□□□□□ -0.07
USP42-206ENST00000479544 MMGT1Q8N4V1 131 aa14.64□□□□□ -0.07
USP42-206ENST00000479544 MTMR8Q96EF0 704 aa14.64□□□□□ -0.07
USP42-206ENST00000479544 HEMGNQ9BXL5 484 aa14.64□□□□□ -0.07
USP42-206ENST00000479544 ARHGAP20Q9P2F6 1191 aa14.64□□□□□ -0.07
USP42-206ENST00000479544 DCTN4Q9UJW0 460 aa14.64□□□□□ -0.07
USP42-206ENST00000479544 ZNF148Q9UQR1 794 aa14.64□□□□□ -0.07
USP42-206ENST00000479544 WDR19Q8NEZ3 1342 aa14.64□□□□□ -0.07
USP42-206ENST00000479544 XRN1Q8IZH2 1706 aaKnown RBP14.64□□□□□ -0.07
USP42-206ENST00000479544 CIB2O75838 187 aa14.63□□□□□ -0.07
USP42-206ENST00000479544 PLA2G4BP0C869 781 aa14.63□□□□□ -0.07
USP42-206ENST00000479544 SNAP25P60880 206 aa14.63□□□□□ -0.07
USP42-206ENST00000479544 SGO2Q562F6 1265 aa14.63□□□□□ -0.07
USP42-206ENST00000479544 OSBPL1AQ9BXW6 950 aa14.63□□□□□ -0.07
USP42-206ENST00000479544 KCND1Q9NSA2 647 aa14.63□□□□□ -0.07
USP42-206ENST00000479544 AGTPBP1Q9UPW5 1226 aa14.63□□□□□ -0.07
USP42-206ENST00000479544 A0A087X0T9 212 aa14.63□□□□□ -0.07
USP42-206ENST00000479544 NPHP3-ACAD11A0A0J9YXS1 232 aa14.63□□□□□ -0.07
USP42-206ENST00000479544 FAM228BP0C875 321 aa14.63□□□□□ -0.07
USP42-206ENST00000479544 PMS2P54278 862 aa14.63□□□□□ -0.07
USP42-206ENST00000479544 LRRC63Q05C16 580 aa14.63□□□□□ -0.07
USP42-206ENST00000479544 NYXQ9GZU5 481 aa14.63□□□□□ -0.07
USP42-206ENST00000479544 FAM217BQ9NTX9 383 aaPredicted RBP14.63□□□□□ -0.07
USP42-206ENST00000479544 EAPPQ56P03 285 aaPredicted RBP14.63□□□□□ -0.07
USP42-206ENST00000479544 FAM182BQ5T319 152 aa14.63□□□□□ -0.07
USP42-206ENST00000479544 UNC13DQ70J99 1090 aa14.63□□□□□ -0.07
USP42-206ENST00000479544 FAM186BQ8IYM0 893 aa14.63□□□□□ -0.07
USP42-206ENST00000479544 PDCD7Q8N8D1 485 aaKnown RBP14.63□□□□□ -0.07
USP42-206ENST00000479544 HSD3B7Q9H2F3 369 aa14.63□□□□□ -0.07
USP42-206ENST00000479544 RTCBQ9Y3I0 505 aaKnown RBP14.63□□□□□ -0.07
USP42-206ENST00000479544 PCDHA1Q9Y5I3 950 aa14.63□□□□□ -0.07
USP42-206ENST00000479544 FANCGO15287 622 aa14.63□□□□□ -0.07
USP42-206ENST00000479544 DLATP10515 647 aaKnown RBP14.63□□□□□ -0.07
USP42-206ENST00000479544 ATF2P15336 505 aa14.63□□□□□ -0.07
USP42-206ENST00000479544 CA4P22748 312 aa14.63□□□□□ -0.07
USP42-206ENST00000479544 SARSP49591 514 aaKnown RBP14.63□□□□□ -0.07
USP42-206ENST00000479544 CFAP157Q5JU67 520 aa14.63□□□□□ -0.07
USP42-206ENST00000479544 NOD2Q9HC29 1040 aa14.63□□□□□ -0.07
USP42-206ENST00000479544 CEP72Q9P209 647 aa14.63□□□□□ -0.07
USP42-206ENST00000479544 XIRP1Q702N8 1843 aaKnown RBP14.63□□□□□ -0.07
USP42-206ENST00000479544 MTM1Q13496 603 aa14.62□□□□□ -0.07
USP42-206ENST00000479544 HIPK4Q8NE63 616 aa14.62□□□□□ -0.07
USP42-206ENST00000479544 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.62□□□□□ -0.07
USP42-206ENST00000479544 FGFR1OP2Q9NVK5 253 aa14.62□□□□□ -0.07
USP42-206ENST00000479544 PXDNLA1KZ92 1463 aa14.62□□□□□ -0.07
USP42-206ENST00000479544 POTEB3A0JP26 581 aa14.62□□□□□ -0.07
USP42-206ENST00000479544 POTECB2RU33 542 aa14.62□□□□□ -0.07
USP42-206ENST00000479544 BRAFP15056 766 aa14.62□□□□□ -0.07
USP42-206ENST00000479544 KCNJ1P48048 391 aa14.62□□□□□ -0.07
USP42-206ENST00000479544 TRADDQ15628 312 aa14.62□□□□□ -0.07
USP42-206ENST00000479544 POTEBQ6S5H4 581 aa14.62□□□□□ -0.07
USP42-206ENST00000479544 ZC3H18Q86VM9 953 aaKnown RBP14.62□□□□□ -0.07
USP42-206ENST00000479544 RAPGEF5Q92565 580 aa14.62□□□□□ -0.07
USP42-206ENST00000479544 BHMT2Q9H2M3 363 aa14.62□□□□□ -0.07
USP42-206ENST00000479544 ATP8A2Q9NTI2 1148 aa14.62□□□□□ -0.07
USP42-206ENST00000479544 TROVE2P10155 538 aaKnown RBP eCLIP14.62□□□□□ -0.07
USP42-206ENST00000479544 SLC9A1P19634 815 aa14.62□□□□□ -0.07
USP42-206ENST00000479544 RAD23BP54727 409 aa14.62□□□□□ -0.07
USP42-206ENST00000479544 IL9RQ01113 521 aa14.62□□□□□ -0.07
USP42-206ENST00000479544 ODR4Q5SWX8 454 aa14.62□□□□□ -0.07
USP42-206ENST00000479544 RAB3IL1Q8TBN0 382 aa14.62□□□□□ -0.07
USP42-206ENST00000479544 PIGOQ8TEQ8 1089 aa14.62□□□□□ -0.07
USP42-206ENST00000479544 ZBTB10Q96DT7 871 aa14.62□□□□□ -0.07
USP42-206ENST00000479544 XPO6Q96QU8 1125 aaKnown RBP14.62□□□□□ -0.07
USP42-206ENST00000479544 SPATA31A5Q5VU36 1347 aa14.62□□□□□ -0.07
USP42-206ENST00000479544 SPATA31A7Q8IWB4 1347 aa14.62□□□□□ -0.07
USP42-206ENST00000479544 USP32Q8NFA0 1604 aa14.62□□□□□ -0.07
USP42-206ENST00000479544 CCDC188H7C350 402 aa14.61□□□□□ -0.07
USP42-206ENST00000479544 KIF1CO43896 1103 aaKnown RBP14.61□□□□□ -0.07
USP42-206ENST00000479544 TTMPQ5BVD1 217 aa14.61□□□□□ -0.07
USP42-206ENST00000479544 C6orf118Q5T5N4 469 aa14.61□□□□□ -0.07
USP42-206ENST00000479544 ZNF653Q96CK0 615 aa14.61□□□□□ -0.07
USP42-206ENST00000479544 UBE2TQ9NPD8 197 aaPredicted RBP14.61□□□□□ -0.07
USP42-206ENST00000479544 PLAGL2Q9UPG8 496 aa14.61□□□□□ -0.07
USP42-206ENST00000479544 BZW2Q9Y6E2 419 aaKnown RBP14.61□□□□□ -0.07
USP42-206ENST00000479544 LUC7L3O95232 432 aaKnown RBP14.61□□□□□ -0.07
USP42-206ENST00000479544 MYL1P05976 194 aa14.61□□□□□ -0.07
USP42-206ENST00000479544 VEGFAP15692 232 aaPredicted RBP14.61□□□□□ -0.07
USP42-206ENST00000479544 MDM2Q00987 491 aaPredicted RBP14.61□□□□□ -0.07
USP42-206ENST00000479544 MFSD14BQ5SR56 506 aa14.61□□□□□ -0.07
USP42-206ENST00000479544 LZTS2Q9BRK4 669 aa14.61□□□□□ -0.07
USP42-206ENST00000479544 ISCA1Q9BUE6 129 aa14.61□□□□□ -0.07
USP42-206ENST00000479544 YY1AP1Q9H869 796 aa14.61□□□□□ -0.07
USP42-206ENST00000479544 UTYO14607 1347 aa14.61□□□□□ -0.07
USP42-206ENST00000479544 MYMKA6NI61 221 aa14.61□□□□□ -0.07
USP42-206ENST00000479544 USP17L15C9J2P7 530 aa14.61□□□□□ -0.07
USP42-206ENST00000479544 USP17L13C9JLJ4 530 aa14.61□□□□□ -0.07
USP42-206ENST00000479544 USP17L11C9JVI0 530 aa14.61□□□□□ -0.07
USP42-206ENST00000479544 USP17L18D6R9N7 530 aa14.61□□□□□ -0.07
USP42-206ENST00000479544 USP17L22D6RA61 530 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms