RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 WTAPQ15007 396 aa23.04■■□□□ 1.28
SDF4-206ENST00000478938 PKN1Q16512 942 aa23.04■■□□□ 1.28
SDF4-206ENST00000478938 DENND2CQ68D51 928 aa23.04■■□□□ 1.28
SDF4-206ENST00000478938 DPY19L2Q6NUT2 758 aa23.04■■□□□ 1.28
SDF4-206ENST00000478938 DNAJC14Q6Y2X3 702 aaPredicted RBP23.04■■□□□ 1.28
SDF4-206ENST00000478938 FAM47EQ6ZV65 393 aa23.04■■□□□ 1.28
SDF4-206ENST00000478938 FANCBQ8NB91 859 aa23.04■■□□□ 1.28
SDF4-206ENST00000478938 NID2Q14112 1375 aa23.04■■□□□ 1.28
SDF4-206ENST00000478938 SSU72P8A0A1W2PR75 194 aa23.04■■□□□ 1.28
SDF4-206ENST00000478938 CCDC169A6NNP5 214 aa23.04■■□□□ 1.28
SDF4-206ENST00000478938 ENTPD5O75356 428 aa23.04■■□□□ 1.28
SDF4-206ENST00000478938 GSTA2P09210 222 aa23.04■■□□□ 1.28
SDF4-206ENST00000478938 RBBP8NLQ8NC74 664 aaPredicted RBP23.04■■□□□ 1.28
SDF4-206ENST00000478938 NEK9Q8TD19 979 aa23.04■■□□□ 1.28
SDF4-206ENST00000478938 ACTRT1Q8TDG2 376 aa23.04■■□□□ 1.28
SDF4-206ENST00000478938 ANKS1AQ92625 1134 aa23.04■■□□□ 1.28
SDF4-206ENST00000478938 GBP5Q96PP8 586 aa23.04■■□□□ 1.28
SDF4-206ENST00000478938 ATP8A2Q9NTI2 1148 aa23.04■■□□□ 1.28
SDF4-206ENST00000478938 PCDH11XQ9BZA7 1347 aa23.04■■□□□ 1.28
SDF4-206ENST00000478938 O00370 1275 aa23.03■■□□□ 1.28
SDF4-206ENST00000478938 AFPP02771 609 aaKnown RBP23.03■■□□□ 1.28
SDF4-206ENST00000478938 NUDT17P0C025 328 aa23.03■■□□□ 1.28
SDF4-206ENST00000478938 SPATA31D3P0C874 917 aa23.03■■□□□ 1.28
SDF4-206ENST00000478938 SPATA31D4Q6ZUB0 917 aa23.03■■□□□ 1.28
SDF4-206ENST00000478938 ENDOVQ8N8Q3 282 aaKnown RBP23.03■■□□□ 1.28
SDF4-206ENST00000478938 MIPOL1Q8TD10 442 aa23.03■■□□□ 1.28
SDF4-206ENST00000478938 IQCDQ96DY2 449 aa23.03■■□□□ 1.28
SDF4-206ENST00000478938 DISC1Q9NRI5 854 aa23.03■■□□□ 1.28
SDF4-206ENST00000478938 UTP11Q9Y3A2 253 aaKnown RBP23.03■■□□□ 1.28
SDF4-206ENST00000478938 TLR2O60603 784 aa23.03■■□□□ 1.28
SDF4-206ENST00000478938 ATP9AO75110 1047 aa23.03■■□□□ 1.28
SDF4-206ENST00000478938 PMS2P54278 862 aa23.03■■□□□ 1.28
SDF4-206ENST00000478938 C1orf141Q5JVX7 400 aa23.03■■□□□ 1.28
SDF4-206ENST00000478938 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP23.03■■□□□ 1.28
SDF4-206ENST00000478938 FAM114A2Q9NRY5 505 aa23.03■■□□□ 1.28
SDF4-206ENST00000478938 RASA1P20936 1047 aa23.02■■□□□ 1.28
SDF4-206ENST00000478938 IGHMBP2P38935 993 aaKnown RBP23.02■■□□□ 1.28
SDF4-206ENST00000478938 PTPRN2Q92932 1015 aa23.02■■□□□ 1.28
SDF4-206ENST00000478938 LRRC59Q96AG4 307 aaKnown RBP23.02■■□□□ 1.28
SDF4-206ENST00000478938 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.02■■□□□ 1.282e-20■□□□□ 10.9
SDF4-206ENST00000478938 RMI1Q9H9A7 625 aa23.02■■□□□ 1.28
SDF4-206ENST00000478938 DBR1Q9UK59 544 aaKnown RBP23.02■■□□□ 1.28
SDF4-206ENST00000478938 BICDL2A1A5D9 508 aa23.02■■□□□ 1.28
SDF4-206ENST00000478938 AGTP01019 485 aa23.02■■□□□ 1.28
SDF4-206ENST00000478938 FCER1AP12319 257 aa23.02■■□□□ 1.28
SDF4-206ENST00000478938 XBP1P17861 261 aa23.02■■□□□ 1.28
SDF4-206ENST00000478938 BPIFB4P59827 614 aa23.02■■□□□ 1.28
SDF4-206ENST00000478938 ARID5AQ03989 594 aa23.02■■□□□ 1.28
SDF4-206ENST00000478938 STK4Q13043 487 aa23.02■■□□□ 1.28
SDF4-206ENST00000478938 SLC29A2Q14542 456 aa23.02■■□□□ 1.28
SDF4-206ENST00000478938 CNPY1Q3B7I2 92 aa23.02■■□□□ 1.28
SDF4-206ENST00000478938 GALNT17Q6IS24 598 aa23.02■■□□□ 1.28
SDF4-206ENST00000478938 ZC3H18Q86VM9 953 aaKnown RBP23.02■■□□□ 1.28
SDF4-206ENST00000478938 METTL13Q8N6R0 699 aa23.02■■□□□ 1.28
SDF4-206ENST00000478938 SEC14L1Q92503 715 aa23.02■■□□□ 1.28
SDF4-206ENST00000478938 TNFRSF25Q93038 417 aa23.02■■□□□ 1.28
SDF4-206ENST00000478938 HPS3Q969F9 1004 aa23.02■■□□□ 1.28
SDF4-206ENST00000478938 AZIN2Q96A70 460 aa23.02■■□□□ 1.28
SDF4-206ENST00000478938 PABPC3Q9H361 631 aaKnown RBP23.02■■□□□ 1.28
SDF4-206ENST00000478938 PRKAG3Q9UGI9 489 aa23.02■■□□□ 1.28
SDF4-206ENST00000478938 LRCH1Q9Y2L9 728 aa23.02■■□□□ 1.28
SDF4-206ENST00000478938 hCG_2014768A0A024R1R8 64 aa23.01■■□□□ 1.27
SDF4-206ENST00000478938 USP11P51784 963 aa23.01■■□□□ 1.27
SDF4-206ENST00000478938 USP46P62068 366 aa23.01■■□□□ 1.27
SDF4-206ENST00000478938 SOGA3Q5TF21 947 aa23.01■■□□□ 1.27
SDF4-206ENST00000478938 PIK3AP1Q6ZUJ8 805 aa23.01■■□□□ 1.27
SDF4-206ENST00000478938 DNAAF5Q86Y56 855 aa23.01■■□□□ 1.27
SDF4-206ENST00000478938 ZNF654Q8IZM8 581 aa23.01■■□□□ 1.27
SDF4-206ENST00000478938 TIPINQ9BVW5 301 aa23.01■■□□□ 1.27
SDF4-206ENST00000478938 ARHGAP23Q9P227 1491 aa23.01■■□□□ 1.27
SDF4-206ENST00000478938 LMO7Q8WWI1 1683 aa23.01■■□□□ 1.27
SDF4-206ENST00000478938 SIGLEC16A6NMB1 481 aa23.01■■□□□ 1.27
SDF4-206ENST00000478938 PENKP01210 267 aaPredicted RBP23.01■■□□□ 1.27
SDF4-206ENST00000478938 FAM200BP0CF97 657 aa23.01■■□□□ 1.27
SDF4-206ENST00000478938 TARSP26639 723 aaKnown RBP23.01■■□□□ 1.27
SDF4-206ENST00000478938 ADD2P35612 726 aa23.01■■□□□ 1.27
SDF4-206ENST00000478938 SKIV2L2P42285 1042 aaKnown RBP23.01■■□□□ 1.27
SDF4-206ENST00000478938 SFSWAPQ12872 951 aaKnown RBP23.01■■□□□ 1.27
SDF4-206ENST00000478938 PARP6Q2NL67 630 aa23.01■■□□□ 1.27
SDF4-206ENST00000478938 SLC9C1Q4G0N8 1177 aa23.01■■□□□ 1.27
SDF4-206ENST00000478938 OTUD6AQ7L8S5 288 aa23.01■■□□□ 1.27
SDF4-206ENST00000478938 ECHDC2Q86YB7 292 aa23.01■■□□□ 1.27
SDF4-206ENST00000478938 CTNNAL1Q9UBT7 734 aa23.01■■□□□ 1.27
SDF4-206ENST00000478938 A0A087X0T9 212 aa23■■□□□ 1.27
SDF4-206ENST00000478938 CYP1A1P04798 512 aaPredicted RBP23■■□□□ 1.27
SDF4-206ENST00000478938 FAM228BP0C875 321 aa23■■□□□ 1.27
SDF4-206ENST00000478938 LBHD1Q9BQE6 289 aaPredicted RBP23■■□□□ 1.27
SDF4-206ENST00000478938 CARD9Q9H257 536 aa23■■□□□ 1.27
SDF4-206ENST00000478938 LRMDAQ9H2I8 198 aa23■■□□□ 1.27
SDF4-206ENST00000478938 CTTNBP2NLQ9P2B4 639 aa23■■□□□ 1.27
SDF4-206ENST00000478938 CEP126Q9P2H0 1117 aa23■■□□□ 1.27
SDF4-206ENST00000478938 LNPEPQ9UIQ6 1025 aa23■■□□□ 1.27
SDF4-206ENST00000478938 CES2O00748 559 aa23■■□□□ 1.27
SDF4-206ENST00000478938 CETN3O15182 167 aa23■■□□□ 1.27
SDF4-206ENST00000478938 ALDH1B1P30837 517 aa23■■□□□ 1.27
SDF4-206ENST00000478938 NPY5RQ15761 445 aa23■■□□□ 1.27
SDF4-206ENST00000478938 RASIP1Q5U651 963 aa23■■□□□ 1.27
SDF4-206ENST00000478938 CGB2Q6NT52 195 aa23■■□□□ 1.27
SDF4-206ENST00000478938 COL23A1Q86Y22 540 aaPredicted RBP23■■□□□ 1.27
SDF4-206ENST00000478938 GDAP1Q8TB36 358 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms