RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 ALADP13716 330 aa15.1■□□□□ 0.01
VCL-205ENST00000478896 CLUL1Q15846 466 aa15.1■□□□□ 0.01
VCL-205ENST00000478896 CSPP1Q1MSJ5 1256 aa15.1■□□□□ 0.01
VCL-205ENST00000478896 PAN2Q504Q3 1202 aaKnown RBP15.1■□□□□ 0.01
VCL-205ENST00000478896 PLPPR4Q7Z2D5 763 aa15.1■□□□□ 0.01
VCL-205ENST00000478896 NPAS4Q8IUM7 802 aa15.1■□□□□ 0.01
VCL-205ENST00000478896 CMTR2Q8IYT2 770 aaKnown RBP15.1■□□□□ 0.01
VCL-205ENST00000478896 LINC01599Q8WXQ3 324 aa15.1■□□□□ 0.01
VCL-205ENST00000478896 PPP2R3CQ969Q6 453 aa15.1■□□□□ 0.01
VCL-205ENST00000478896 PLVAPQ9BX97 442 aa15.1■□□□□ 0.01
VCL-205ENST00000478896 GLT8D2Q9H1C3 349 aa15.1■□□□□ 0.01
VCL-205ENST00000478896 AGO4Q9HCK5 861 aaKnown RBP15.1■□□□□ 0.01
VCL-205ENST00000478896 LRFN2Q9ULH4 789 aa15.1■□□□□ 0.01
VCL-205ENST00000478896 GINS2Q9Y248 185 aa15.1■□□□□ 0.01
VCL-205ENST00000478896 PCDHA2Q9Y5H9 948 aa15.1■□□□□ 0.01
VCL-205ENST00000478896 SQORQ9Y6N5 450 aa15.1■□□□□ 0.01
VCL-205ENST00000478896 V9GY48 417 aaPredicted RBP15.1■□□□□ 0.01
VCL-205ENST00000478896 IGSF9BQ9UPX0 1349 aa15.1■□□□□ 0.01
VCL-205ENST00000478896 KLF18A0A0U1RQI7 1052 aa15.09■□□□□ 0.01
VCL-205ENST00000478896 SMIM35A0A1B0GVV1 85 aa15.09■□□□□ 0.01
VCL-205ENST00000478896 STXBP3O00186 592 aa15.09■□□□□ 0.01
VCL-205ENST00000478896 SCG2P13521 617 aa15.09■□□□□ 0.01
VCL-205ENST00000478896 SLC26A2P50443 739 aa15.09■□□□□ 0.01
VCL-205ENST00000478896 FGD1P98174 961 aa15.09■□□□□ 0.01
VCL-205ENST00000478896 KRT76Q01546 638 aa15.09■□□□□ 0.01
VCL-205ENST00000478896 NFX1Q12986 1120 aaKnown RBP15.09■□□□□ 0.01
VCL-205ENST00000478896 ITGB3BPQ13352 177 aaPredicted RBP15.09■□□□□ 0.01
VCL-205ENST00000478896 FAM160B1Q5W0V3 765 aa15.09■□□□□ 0.01
VCL-205ENST00000478896 MTHFD1LQ6UB35 978 aa15.09■□□□□ 0.01
VCL-205ENST00000478896 DHX32Q7L7V1 743 aaKnown RBP15.09■□□□□ 0.01
VCL-205ENST00000478896 TEX2Q8IWB9 1127 aa15.09■□□□□ 0.01
VCL-205ENST00000478896 UIMC1Q96RL1 719 aa15.09■□□□□ 0.01
VCL-205ENST00000478896 CELF4Q9BZC1 486 aaKnown RBP15.09■□□□□ 0.01
VCL-205ENST00000478896 IGFLR1Q9H665 355 aa15.09■□□□□ 0.01
VCL-205ENST00000478896 ALG13Q9NP73 1137 aaKnown RBP15.09■□□□□ 0.01
VCL-205ENST00000478896 TMEM260Q9NX78 707 aa15.09■□□□□ 0.01
VCL-205ENST00000478896 BARHL2Q9NY43 387 aa15.09■□□□□ 0.01
VCL-205ENST00000478896 PRKAG3Q9UGI9 489 aa15.09■□□□□ 0.01
VCL-205ENST00000478896 PADI3Q9ULW8 664 aa15.09■□□□□ 0.01
VCL-205ENST00000478896 ARIH1Q9Y4X5 557 aaPredicted RBP15.09■□□□□ 0.01
VCL-205ENST00000478896 MRPL42Q9Y6G3 142 aaKnown RBP15.09■□□□□ 0.01
VCL-205ENST00000478896 PRR33A8MZF0 331 aa15.08■□□□□ 0
VCL-205ENST00000478896 HBP1O60381 514 aa15.08■□□□□ 0
VCL-205ENST00000478896 SREBF1P36956 1147 aa15.08■□□□□ 0
VCL-205ENST00000478896 ZP2Q05996 745 aa15.08■□□□□ 0
VCL-205ENST00000478896 HYAL1Q12794 435 aa15.08■□□□□ 0
VCL-205ENST00000478896 COL19A1Q14993 1142 aa15.08■□□□□ 0
VCL-205ENST00000478896 TMEM266Q2M3C6 531 aa15.08■□□□□ 0
VCL-205ENST00000478896 BMP2KLQ5H9B9 411 aa15.08■□□□□ 0
VCL-205ENST00000478896 PLA2G4DQ86XP0 818 aa15.08■□□□□ 0
VCL-205ENST00000478896 NME8Q8N427 588 aa15.08■□□□□ 0
VCL-205ENST00000478896 P2RX5Q93086 422 aa15.08■□□□□ 0
VCL-205ENST00000478896 TCEAL9Q9UHQ7 104 aa15.08■□□□□ 0
VCL-205ENST00000478896 BRPF3Q9ULD4 1205 aa15.08■□□□□ 0
VCL-205ENST00000478896 MYO7AQ13402 2215 aa15.08■□□□□ 0
VCL-205ENST00000478896 MYH9P35579 1960 aaKnown RBP15.07■□□□□ 0
VCL-205ENST00000478896 DCXO43602 365 aa15.07■□□□□ 0
VCL-205ENST00000478896 KLRC1P26715 233 aa15.07■□□□□ 0
VCL-205ENST00000478896 GTF2F1P35269 517 aaKnown RBP eCLIP15.07■□□□□ 08e-7■■■■■ 61.7
VCL-205ENST00000478896 CLK2P49760 499 aaKnown RBP15.07■□□□□ 0
VCL-205ENST00000478896 NDUFV1P49821 464 aa15.07■□□□□ 0
VCL-205ENST00000478896 FUT2Q10981 343 aa15.07■□□□□ 0
VCL-205ENST00000478896 KRT32Q14532 448 aa15.07■□□□□ 0
VCL-205ENST00000478896 ADCK5Q3MIX3 580 aa15.07■□□□□ 0
VCL-205ENST00000478896 SPOUT1Q5T280 376 aaKnown RBP15.07■□□□□ 0
VCL-205ENST00000478896 JAKMIP3Q5VZ66 844 aa15.07■□□□□ 0
VCL-205ENST00000478896 MIS18BP1Q6P0N0 1132 aa15.07■□□□□ 0
VCL-205ENST00000478896 PDXDC2PQ6P474 469 aa15.07■□□□□ 0
VCL-205ENST00000478896 ADHFE1Q8IWW8 467 aa15.07■□□□□ 0
VCL-205ENST00000478896 CKAP2LQ8IYA6 745 aa15.07■□□□□ 0
VCL-205ENST00000478896 POP1Q99575 1024 aaKnown RBP15.07■□□□□ 0
VCL-205ENST00000478896 ZNF302Q9NR11 478 aa15.07■□□□□ 0
VCL-205ENST00000478896 PLAGL2Q9UPG8 496 aa15.07■□□□□ 0
VCL-205ENST00000478896 KDM3AQ9Y4C1 1321 aa15.07■□□□□ 0
VCL-205ENST00000478896 EVPLQ92817 2033 aa15.07■□□□□ 0
VCL-205ENST00000478896 PLXNA4Q9HCM2 1894 aa15.06■□□□□ 0
VCL-205ENST00000478896 DENND3A2RUS2 1198 aa15.06■□□□□ 0
VCL-205ENST00000478896 MEIS1O00470 390 aa15.06■□□□□ 0
VCL-205ENST00000478896 MBTPS2O43462 519 aa15.06■□□□□ 0
VCL-205ENST00000478896 TBX10O75333 385 aa15.06■□□□□ 0
VCL-205ENST00000478896 RPS6KA5O75582 802 aa15.06■□□□□ 0
VCL-205ENST00000478896 ATG7O95352 703 aa15.06■□□□□ 0
VCL-205ENST00000478896 ITGB1P05556 798 aa15.06■□□□□ 0
VCL-205ENST00000478896 CDC27P30260 824 aa15.06■□□□□ 0
VCL-205ENST00000478896 LTBRP36941 435 aa15.06■□□□□ 0
VCL-205ENST00000478896 METAP2P50579 478 aaKnown RBP eCLIP15.06■□□□□ 03e-6■■□□□ 14.5
VCL-205ENST00000478896 EXOSC10Q01780 885 aaKnown RBP15.06■□□□□ 0
VCL-205ENST00000478896 DLX2Q07687 328 aaPredicted RBP15.06■□□□□ 0
VCL-205ENST00000478896 CTC1Q2NKJ3 1217 aa15.06■□□□□ 0
VCL-205ENST00000478896 NAALADL2Q58DX5 795 aa15.06■□□□□ 0
VCL-205ENST00000478896 ODR4Q5SWX8 454 aa15.06■□□□□ 0
VCL-205ENST00000478896 NIPA1Q7RTP0 329 aa15.06■□□□□ 0
VCL-205ENST00000478896 TRMT1LQ7Z2T5 733 aaKnown RBP15.06■□□□□ 0
VCL-205ENST00000478896 RTN4RL1Q86UN2 441 aaPredicted RBP15.06■□□□□ 0
VCL-205ENST00000478896 SKAP1Q86WV1 359 aa15.06■□□□□ 0
VCL-205ENST00000478896 CCDC60Q8IWA6 550 aaPredicted RBP15.06■□□□□ 0
VCL-205ENST00000478896 KLHL23Q8NBE8 558 aa15.06■□□□□ 0
VCL-205ENST00000478896 ATP8B4Q8TF62 1192 aa15.06■□□□□ 0
VCL-205ENST00000478896 POF1BQ8WVV4 589 aa15.06■□□□□ 0
VCL-205ENST00000478896 PPP1R16BQ96T49 567 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms