RNA–Protein interactions for RNA: ENST00000478840.1

UPF3B-203, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3B, Length 748 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-203ENST00000478840 WFDC3Q8IUB2 231 aa6.67□□□□□ -1.34
UPF3B-203ENST00000478840 TRIM48Q8IWZ4 208 aa6.67□□□□□ -1.34
UPF3B-203ENST00000478840 TTLL11Q8NHH1 800 aa6.67□□□□□ -1.34
UPF3B-203ENST00000478840 BCL7CQ8WUZ0 217 aaPredicted RBP6.67□□□□□ -1.34
UPF3B-203ENST00000478840 PLCD4Q9BRC7 762 aa6.67□□□□□ -1.34
UPF3B-203ENST00000478840 WNT8AQ9H1J5 351 aa6.67□□□□□ -1.34
UPF3B-203ENST00000478840 SLC12A5Q9H2X9 1139 aa6.67□□□□□ -1.34
UPF3B-203ENST00000478840 BSDC1Q9NW68 430 aaPredicted RBP6.67□□□□□ -1.34
UPF3B-203ENST00000478840 MYOTQ9UBF9 498 aa6.67□□□□□ -1.34
UPF3B-203ENST00000478840 MSRAQ9UJ68 235 aa6.67□□□□□ -1.34
UPF3B-203ENST00000478840 A0A1W2PQ27 194 aa6.66□□□□□ -1.34
UPF3B-203ENST00000478840 A0A1W2PQ64 194 aa6.66□□□□□ -1.34
UPF3B-203ENST00000478840 A0A1W2PQC6 194 aa6.66□□□□□ -1.34
UPF3B-203ENST00000478840 A0A1W2PQD8 194 aa6.66□□□□□ -1.34
UPF3B-203ENST00000478840 LCHNA4D1U4 455 aa6.66□□□□□ -1.34
UPF3B-203ENST00000478840 PRNPP04156 253 aa6.66□□□□□ -1.34
UPF3B-203ENST00000478840 MANFP55145 182 aaKnown RBP6.66□□□□□ -1.34
UPF3B-203ENST00000478840 ADKP55263 362 aaKnown RBP6.66□□□□□ -1.34
UPF3B-203ENST00000478840 OS9Q13438 667 aaPredicted RBP6.66□□□□□ -1.34
UPF3B-203ENST00000478840 SLC14A2Q15849 920 aa6.66□□□□□ -1.34
UPF3B-203ENST00000478840 BTBD8Q5XKL5 378 aa6.66□□□□□ -1.34
UPF3B-203ENST00000478840 PPP4R4Q6NUP7 873 aa6.66□□□□□ -1.34
UPF3B-203ENST00000478840 TTLL7Q6ZT98 887 aa6.66□□□□□ -1.34
UPF3B-203ENST00000478840 KCNK18Q7Z418 384 aa6.66□□□□□ -1.34
UPF3B-203ENST00000478840 CABP7Q86V35 215 aa6.66□□□□□ -1.34
UPF3B-203ENST00000478840 CLEC4DQ8WXI8 215 aa6.66□□□□□ -1.34
UPF3B-203ENST00000478840 RTF1Q92541 710 aaKnown RBP6.66□□□□□ -1.34
UPF3B-203ENST00000478840 CCDC120Q96HB5 630 aa6.66□□□□□ -1.34
UPF3B-203ENST00000478840 NMRK2Q9NPI5 230 aa6.66□□□□□ -1.34
UPF3B-203ENST00000478840 DNAJC28Q9NX36 388 aa6.66□□□□□ -1.34
UPF3B-203ENST00000478840 SLAMF8Q9P0V8 285 aa6.66□□□□□ -1.34
UPF3B-203ENST00000478840 KCNG1Q9UIX4 513 aa6.66□□□□□ -1.34
UPF3B-203ENST00000478840 GPR45Q9Y5Y3 372 aa6.66□□□□□ -1.34
UPF3B-203ENST00000478840 FITM1A5D6W6 292 aa6.65□□□□□ -1.34
UPF3B-203ENST00000478840 FOXP2O15409 715 aa6.65□□□□□ -1.34
UPF3B-203ENST00000478840 SRGAP3O43295 1099 aa6.65□□□□□ -1.34
UPF3B-203ENST00000478840 PHKG2P15735 406 aa6.65□□□□□ -1.34
UPF3B-203ENST00000478840 HSPA6P17066 643 aa6.65□□□□□ -1.34
UPF3B-203ENST00000478840 PRKCAP17252 672 aa6.65□□□□□ -1.34
UPF3B-203ENST00000478840 CD96P40200 585 aa6.65□□□□□ -1.34
UPF3B-203ENST00000478840 MRPS9P82933 396 aaKnown RBP6.65□□□□□ -1.34
UPF3B-203ENST00000478840 ZP2Q05996 745 aa6.65□□□□□ -1.34
UPF3B-203ENST00000478840 ESPNLQ6ZVH7 1005 aa6.65□□□□□ -1.34
UPF3B-203ENST00000478840 PHYKPLQ8IUZ5 450 aa6.65□□□□□ -1.34
UPF3B-203ENST00000478840 OXR1Q8N573 874 aa6.65□□□□□ -1.34
UPF3B-203ENST00000478840 NUP43Q8NFH3 380 aa6.65□□□□□ -1.34
UPF3B-203ENST00000478840 PJA1Q8NG27 643 aa6.65□□□□□ -1.34
UPF3B-203ENST00000478840 SLC35G2Q8TBE7 412 aa6.65□□□□□ -1.34
UPF3B-203ENST00000478840 FOXRED1Q96CU9 486 aaPredicted RBP6.65□□□□□ -1.34
UPF3B-203ENST00000478840 MAML3Q96JK9 1138 aa6.65□□□□□ -1.34
UPF3B-203ENST00000478840 C1orf112Q9NSG2 853 aa6.65□□□□□ -1.34
UPF3B-203ENST00000478840 PCDHB4Q9Y5E5 795 aa6.65□□□□□ -1.34
UPF3B-203ENST00000478840 TCRBV5S2A0A599 114 aa6.64□□□□□ -1.35
UPF3B-203ENST00000478840 ANO9A1A5B4 782 aa6.64□□□□□ -1.35
UPF3B-203ENST00000478840 ACOT7O00154 380 aa6.64□□□□□ -1.35
UPF3B-203ENST00000478840 SGSM2O43147 1006 aa6.64□□□□□ -1.35
UPF3B-203ENST00000478840 DYRK3O43781 588 aa6.64□□□□□ -1.35
UPF3B-203ENST00000478840 EFEMP2O95967 443 aa6.64□□□□□ -1.35
UPF3B-203ENST00000478840 TGFB1P01137 390 aa6.64□□□□□ -1.35
UPF3B-203ENST00000478840 TMEM253P0C7T8 217 aa6.64□□□□□ -1.35
UPF3B-203ENST00000478840 CD8BP10966 210 aa6.64□□□□□ -1.35
UPF3B-203ENST00000478840 MTHFD2P13995 350 aa6.64□□□□□ -1.35
UPF3B-203ENST00000478840 TACR1P25103 407 aa6.64□□□□□ -1.35
UPF3B-203ENST00000478840 BNIP3Q12983 259 aa6.64□□□□□ -1.35
UPF3B-203ENST00000478840 GRM3Q14832 879 aa6.64□□□□□ -1.35
UPF3B-203ENST00000478840 CLUL1Q15846 466 aa6.64□□□□□ -1.35
UPF3B-203ENST00000478840 ATAT1Q5SQI0 421 aa6.64□□□□□ -1.35
UPF3B-203ENST00000478840 INTS5Q6P9B9 1019 aaKnown RBP6.64□□□□□ -1.35
UPF3B-203ENST00000478840 RTN4RL1Q86UN2 441 aaPredicted RBP6.64□□□□□ -1.35
UPF3B-203ENST00000478840 TGFBRAP1Q8WUH2 860 aa6.64□□□□□ -1.35
UPF3B-203ENST00000478840 TTC17Q96AE7 1141 aa6.64□□□□□ -1.35
UPF3B-203ENST00000478840 TIFAQ96CG3 184 aa6.64□□□□□ -1.35
UPF3B-203ENST00000478840 AP5M1Q9H0R1 490 aa6.64□□□□□ -1.35
UPF3B-203ENST00000478840 CSRNP2Q9H175 543 aa6.64□□□□□ -1.35
UPF3B-203ENST00000478840 SEMA4AQ9H3S1 761 aa6.64□□□□□ -1.35
UPF3B-203ENST00000478840 DDX21Q9NR30 783 aaKnown RBP eCLIP6.64□□□□□ -1.35
UPF3B-203ENST00000478840 RIC8BQ9NVN3 520 aa6.64□□□□□ -1.35
UPF3B-203ENST00000478840 SLC5A6Q9Y289 635 aa6.64□□□□□ -1.35
UPF3B-203ENST00000478840 PTPN22Q9Y2R2 807 aa6.64□□□□□ -1.35
UPF3B-203ENST00000478840 ASB1Q9Y576 335 aa6.64□□□□□ -1.35
UPF3B-203ENST00000478840 GOLGA6L22H0YM25 854 aa6.63□□□□□ -1.35
UPF3B-203ENST00000478840 CYP4F8P98187 520 aa6.63□□□□□ -1.35
UPF3B-203ENST00000478840 SRSF2Q01130 221 aaKnown RBP6.63□□□□□ -1.35
UPF3B-203ENST00000478840 GALEQ14376 348 aa6.63□□□□□ -1.35
UPF3B-203ENST00000478840 KIR3DS1Q14943 382 aa6.63□□□□□ -1.35
UPF3B-203ENST00000478840 ACAP2Q15057 778 aa6.63□□□□□ -1.35
UPF3B-203ENST00000478840 BRD3Q15059 726 aa6.63□□□□□ -1.35
UPF3B-203ENST00000478840 UGT8Q16880 541 aa6.63□□□□□ -1.35
UPF3B-203ENST00000478840 LONRF3Q496Y0 759 aa6.63□□□□□ -1.35
UPF3B-203ENST00000478840 ARHGAP29Q52LW3 1261 aa6.63□□□□□ -1.35
UPF3B-203ENST00000478840 CHST15Q7LFX5 561 aaPredicted RBP6.63□□□□□ -1.35
UPF3B-203ENST00000478840 SPRED2Q7Z698 418 aa6.63□□□□□ -1.35
UPF3B-203ENST00000478840 NLRX1Q86UT6 975 aa6.63□□□□□ -1.35
UPF3B-203ENST00000478840 RBM12BQ8IXT5 1001 aaKnown RBP6.63□□□□□ -1.35
UPF3B-203ENST00000478840 FAM43AQ8N2R8 423 aa6.63□□□□□ -1.35
UPF3B-203ENST00000478840 ASB15Q8WXK1 588 aa6.63□□□□□ -1.35
UPF3B-203ENST00000478840 E2F7Q96AV8 911 aa6.63□□□□□ -1.35
UPF3B-203ENST00000478840 RAX2Q96IS3 184 aa6.63□□□□□ -1.35
UPF3B-203ENST00000478840 TAAR9Q96RI9 348 aa6.63□□□□□ -1.35
UPF3B-203ENST00000478840 MPHOSPH6Q99547 160 aaKnown RBP6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms