RNA–Protein interactions for RNA: ENST00000477890.6

CPSF7-211, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,234 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-211ENST00000477890 TCEANC2Q96MN5 208 aa13.41□□□□□ -0.26
CPSF7-211ENST00000477890 NEK1Q96PY6 1258 aa13.41□□□□□ -0.26
CPSF7-211ENST00000477890 PLVAPQ9BX97 442 aa13.41□□□□□ -0.26
CPSF7-211ENST00000477890 CELF4Q9BZC1 486 aaKnown RBP13.41□□□□□ -0.26
CPSF7-211ENST00000477890 IGFLR1Q9H665 355 aa13.41□□□□□ -0.26
CPSF7-211ENST00000477890 AGO4Q9HCK5 861 aaKnown RBP13.41□□□□□ -0.26
CPSF7-211ENST00000477890 PRKAG3Q9UGI9 489 aa13.41□□□□□ -0.26
CPSF7-211ENST00000477890 PADI3Q9ULW8 664 aa13.41□□□□□ -0.26
CPSF7-211ENST00000477890 MRPL42Q9Y6G3 142 aaKnown RBP13.41□□□□□ -0.26
CPSF7-211ENST00000477890 IGSF9BQ9UPX0 1349 aa13.4□□□□□ -0.26
CPSF7-211ENST00000477890 POTEB3A0JP26 581 aa13.4□□□□□ -0.26
CPSF7-211ENST00000477890 SMCO2A6NFE2 343 aa13.4□□□□□ -0.26
CPSF7-211ENST00000477890 DDX39AO00148 427 aaKnown RBP13.4□□□□□ -0.26
CPSF7-211ENST00000477890 STXBP3O00186 592 aa13.4□□□□□ -0.26
CPSF7-211ENST00000477890 ZBTB43O43298 467 aa13.4□□□□□ -0.26
CPSF7-211ENST00000477890 STAG3L1P0CL83 205 aa13.4□□□□□ -0.26
CPSF7-211ENST00000477890 IBSPP21815 317 aaPredicted RBP13.4□□□□□ -0.26
CPSF7-211ENST00000477890 GTF2F1P35269 517 aaKnown RBP eCLIP13.4□□□□□ -0.265e-10■■■■■ 57.2
CPSF7-211ENST00000477890 ZNF76P36508 570 aa13.4□□□□□ -0.26
CPSF7-211ENST00000477890 ZP2Q05996 745 aa13.4□□□□□ -0.26
CPSF7-211ENST00000477890 DLX2Q07687 328 aaPredicted RBP13.4□□□□□ -0.26
CPSF7-211ENST00000477890 CTC1Q2NKJ3 1217 aa13.4□□□□□ -0.26
CPSF7-211ENST00000477890 PAN2Q504Q3 1202 aaKnown RBP13.4□□□□□ -0.26
CPSF7-211ENST00000477890 POTEBQ6S5H4 581 aa13.4□□□□□ -0.26
CPSF7-211ENST00000477890 MTHFD1LQ6UB35 978 aa13.4□□□□□ -0.26
CPSF7-211ENST00000477890 ADHFE1Q8IWW8 467 aa13.4□□□□□ -0.26
CPSF7-211ENST00000477890 CMTR2Q8IYT2 770 aaKnown RBP13.4□□□□□ -0.26
CPSF7-211ENST00000477890 UIMC1Q96RL1 719 aa13.4□□□□□ -0.26
CPSF7-211ENST00000477890 TMEM260Q9NX78 707 aa13.4□□□□□ -0.26
CPSF7-211ENST00000477890 BRPF3Q9ULD4 1205 aa13.4□□□□□ -0.26
CPSF7-211ENST00000477890 PLAGL2Q9UPG8 496 aa13.4□□□□□ -0.26
CPSF7-211ENST00000477890 V9GY48 417 aaPredicted RBP13.4□□□□□ -0.26
CPSF7-211ENST00000477890 EVPLQ92817 2033 aa13.39□□□□□ -0.27
CPSF7-211ENST00000477890 SMIM35A0A1B0GVV1 85 aa13.39□□□□□ -0.27
CPSF7-211ENST00000477890 GOLGA8AA7E2F4 631 aa13.39□□□□□ -0.27
CPSF7-211ENST00000477890 GOLGA8BA8MQT2 603 aa13.39□□□□□ -0.27
CPSF7-211ENST00000477890 hCG_1984214I3L0E3 225 aa13.39□□□□□ -0.27
CPSF7-211ENST00000477890 MEIS1O00470 390 aa13.39□□□□□ -0.27
CPSF7-211ENST00000477890 BACH1O14867 736 aa13.39□□□□□ -0.27
CPSF7-211ENST00000477890 DCXO43602 365 aa13.39□□□□□ -0.27
CPSF7-211ENST00000477890 ATG7O95352 703 aa13.39□□□□□ -0.27
CPSF7-211ENST00000477890 SCG2P13521 617 aa13.39□□□□□ -0.27
CPSF7-211ENST00000477890 HOXD11P31277 338 aaPredicted RBP13.39□□□□□ -0.27
CPSF7-211ENST00000477890 SREBF1P36956 1147 aa13.39□□□□□ -0.27
CPSF7-211ENST00000477890 SLC26A2P50443 739 aa13.39□□□□□ -0.27
CPSF7-211ENST00000477890 KRT76Q01546 638 aa13.39□□□□□ -0.27
CPSF7-211ENST00000477890 EXOSC10Q01780 885 aaKnown RBP13.39□□□□□ -0.27
CPSF7-211ENST00000477890 FUT2Q10981 343 aa13.39□□□□□ -0.27
CPSF7-211ENST00000477890 CAMK1Q14012 370 aa13.39□□□□□ -0.27
CPSF7-211ENST00000477890 CSPP1Q1MSJ5 1256 aa13.39□□□□□ -0.27
CPSF7-211ENST00000477890 TMEM266Q2M3C6 531 aa13.39□□□□□ -0.27
CPSF7-211ENST00000477890 DHX32Q7L7V1 743 aaKnown RBP13.39□□□□□ -0.27
CPSF7-211ENST00000477890 TEX2Q8IWB9 1127 aa13.39□□□□□ -0.27
CPSF7-211ENST00000477890 CRIPAKQ8N1N5 446 aa13.39□□□□□ -0.27
CPSF7-211ENST00000477890 NME8Q8N427 588 aa13.39□□□□□ -0.27
CPSF7-211ENST00000477890 ZNF713Q8N859 430 aaPredicted RBP13.39□□□□□ -0.27
CPSF7-211ENST00000477890 P2RX5Q93086 422 aa13.39□□□□□ -0.27
CPSF7-211ENST00000477890 BARHL2Q9NY43 387 aa13.39□□□□□ -0.27
CPSF7-211ENST00000477890 LRFN2Q9ULH4 789 aa13.39□□□□□ -0.27
CPSF7-211ENST00000477890 GINS2Q9Y248 185 aa13.39□□□□□ -0.27
CPSF7-211ENST00000477890 KDM3AQ9Y4C1 1321 aa13.39□□□□□ -0.27
CPSF7-211ENST00000477890 KLF18A0A0U1RQI7 1052 aa13.38□□□□□ -0.27
CPSF7-211ENST00000477890 C19orf67A6NJJ6 358 aa13.38□□□□□ -0.27
CPSF7-211ENST00000477890 LINC01565O15544 149 aa13.38□□□□□ -0.27
CPSF7-211ENST00000477890 MBTPS2O43462 519 aa13.38□□□□□ -0.27
CPSF7-211ENST00000477890 HBP1O60381 514 aa13.38□□□□□ -0.27
CPSF7-211ENST00000477890 TBX10O75333 385 aa13.38□□□□□ -0.27
CPSF7-211ENST00000477890 CCNE2O96020 404 aa13.38□□□□□ -0.27
CPSF7-211ENST00000477890 ITGB1P05556 798 aa13.38□□□□□ -0.27
CPSF7-211ENST00000477890 DNAJB1P25685 340 aa13.38□□□□□ -0.27
CPSF7-211ENST00000477890 KLRC1P26715 233 aa13.38□□□□□ -0.27
CPSF7-211ENST00000477890 GATMP50440 423 aa13.38□□□□□ -0.27
CPSF7-211ENST00000477890 NFX1Q12986 1120 aaKnown RBP13.38□□□□□ -0.27
CPSF7-211ENST00000477890 AP3B2Q13367 1082 aa13.38□□□□□ -0.27
CPSF7-211ENST00000477890 SMAD2Q15796 467 aaKnown RBP13.38□□□□□ -0.27
CPSF7-211ENST00000477890 NAALADL2Q58DX5 795 aa13.38□□□□□ -0.27
CPSF7-211ENST00000477890 BMP2KLQ5H9B9 411 aa13.38□□□□□ -0.27
CPSF7-211ENST00000477890 FAM160B1Q5W0V3 765 aa13.38□□□□□ -0.27
CPSF7-211ENST00000477890 PLA2G4DQ86XP0 818 aa13.38□□□□□ -0.27
CPSF7-211ENST00000477890 KLHL23Q8NBE8 558 aa13.38□□□□□ -0.27
CPSF7-211ENST00000477890 SPPL3Q8TCT6 385 aa13.38□□□□□ -0.27
CPSF7-211ENST00000477890 PPP2R3CQ969Q6 453 aa13.38□□□□□ -0.27
CPSF7-211ENST00000477890 GLT8D2Q9H1C3 349 aa13.38□□□□□ -0.27
CPSF7-211ENST00000477890 NAP1L2Q9ULW6 460 aaPredicted RBP13.38□□□□□ -0.27
CPSF7-211ENST00000477890 MYH9P35579 1960 aaKnown RBP13.38□□□□□ -0.27
CPSF7-211ENST00000477890 PLXNA4Q9HCM2 1894 aa13.38□□□□□ -0.27
CPSF7-211ENST00000477890 IGKV6D-21A0A0A0MT36 114 aa13.37□□□□□ -0.27
CPSF7-211ENST00000477890 FAM86B1E9PN63 330 aa13.37□□□□□ -0.27
CPSF7-211ENST00000477890 FAM86B2P0C5J1 330 aa13.37□□□□□ -0.27
CPSF7-211ENST00000477890 CDC27P30260 824 aa13.37□□□□□ -0.27
CPSF7-211ENST00000477890 IRS1P35568 1242 aa13.37□□□□□ -0.27
CPSF7-211ENST00000477890 CLK2P49760 499 aaKnown RBP13.37□□□□□ -0.27
CPSF7-211ENST00000477890 NDUFV1P49821 464 aa13.37□□□□□ -0.27
CPSF7-211ENST00000477890 SMAD4Q13485 552 aaKnown RBP13.37□□□□□ -0.27
CPSF7-211ENST00000477890 ADCK5Q3MIX3 580 aa13.37□□□□□ -0.27
CPSF7-211ENST00000477890 JAKMIP3Q5VZ66 844 aa13.37□□□□□ -0.27
CPSF7-211ENST00000477890 ABHD15Q6UXT9 468 aa13.37□□□□□ -0.27
CPSF7-211ENST00000477890 NIPA1Q7RTP0 329 aa13.37□□□□□ -0.27
CPSF7-211ENST00000477890 ADGRD2Q7Z7M1 963 aa13.37□□□□□ -0.27
CPSF7-211ENST00000477890 SKAP1Q86WV1 359 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms