RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 CYP4A11Q02928 519 aa13.47□□□□□ -0.25
PRPF39-203ENST00000477626 SPRYD7Q5W111 196 aa13.47□□□□□ -0.25
PRPF39-203ENST00000477626 ZNF720Q7Z2F6 126 aa13.47□□□□□ -0.25
PRPF39-203ENST00000477626 SMAP1Q8IYB5 467 aaPredicted RBP13.47□□□□□ -0.25
PRPF39-203ENST00000477626 C17orf53Q8N3J3 647 aaPredicted RBP13.47□□□□□ -0.25
PRPF39-203ENST00000477626 ERMNQ8TAM6 284 aa13.47□□□□□ -0.25
PRPF39-203ENST00000477626 PIGOQ8TEQ8 1089 aa13.47□□□□□ -0.25
PRPF39-203ENST00000477626 DNAJC7Q99615 494 aa13.47□□□□□ -0.25
PRPF39-203ENST00000477626 NTPCRQ9BSD7 190 aaKnown RBP13.47□□□□□ -0.25
PRPF39-203ENST00000477626 LGR5O75473 907 aa13.47□□□□□ -0.25
PRPF39-203ENST00000477626 SLC25A27O95847 323 aa13.47□□□□□ -0.25
PRPF39-203ENST00000477626 ERCC3P19447 782 aa13.47□□□□□ -0.25
PRPF39-203ENST00000477626 SFNP31947 248 aa13.47□□□□□ -0.25
PRPF39-203ENST00000477626 TRIM59Q8IWR1 403 aa13.47□□□□□ -0.25
PRPF39-203ENST00000477626 USP6NLQ92738 828 aa13.47□□□□□ -0.25
PRPF39-203ENST00000477626 NACC1Q96RE7 527 aa13.47□□□□□ -0.25
PRPF39-203ENST00000477626 EIF3JO75822 258 aaKnown RBP13.47□□□□□ -0.25
PRPF39-203ENST00000477626 NOL4O94818 638 aa13.47□□□□□ -0.25
PRPF39-203ENST00000477626 HNRNPH3P31942 346 aaKnown RBP13.47□□□□□ -0.25
PRPF39-203ENST00000477626 FXR1P51114 621 aaKnown RBP eCLIP13.47□□□□□ -0.25
PRPF39-203ENST00000477626 JAK3P52333 1124 aa13.47□□□□□ -0.25
PRPF39-203ENST00000477626 GSDMDP57764 484 aa13.47□□□□□ -0.25
PRPF39-203ENST00000477626 ERVK-9P63128 1117 aa13.47□□□□□ -0.25
PRPF39-203ENST00000477626 ERVK-24P63145 666 aa13.47□□□□□ -0.25
PRPF39-203ENST00000477626 KCNMA1Q12791 1236 aa13.47□□□□□ -0.25
PRPF39-203ENST00000477626 SNAPC2Q13487 334 aa13.47□□□□□ -0.25
PRPF39-203ENST00000477626 MEA1Q16626 185 aa13.47□□□□□ -0.25
PRPF39-203ENST00000477626 FAM26FQ5R3K3 315 aa13.47□□□□□ -0.25
PRPF39-203ENST00000477626 ARHGEF16Q5VV41 709 aa13.47□□□□□ -0.25
PRPF39-203ENST00000477626 ARMC9Q7Z3E5 817 aa13.47□□□□□ -0.25
PRPF39-203ENST00000477626 SFR1Q86XK3 245 aa13.47□□□□□ -0.25
PRPF39-203ENST00000477626 PANX2Q96RD6 677 aa13.47□□□□□ -0.25
PRPF39-203ENST00000477626 PORCNQ9H237 461 aa13.47□□□□□ -0.25
PRPF39-203ENST00000477626 FBXO40Q9UH90 709 aa13.47□□□□□ -0.25
PRPF39-203ENST00000477626 GSTTP1A0A1W2PQM5 241 aa13.46□□□□□ -0.25
PRPF39-203ENST00000477626 KRT76Q01546 638 aa13.46□□□□□ -0.25
PRPF39-203ENST00000477626 WDR59Q6PJI9 974 aa13.46□□□□□ -0.25
PRPF39-203ENST00000477626 ABRAQ8N0Z2 381 aa13.46□□□□□ -0.25
PRPF39-203ENST00000477626 IKZF4Q9H2S9 585 aa13.46□□□□□ -0.25
PRPF39-203ENST00000477626 XPNPEP1Q9NQW7 623 aa13.46□□□□□ -0.25
PRPF39-203ENST00000477626 BACH1O14867 736 aa13.46□□□□□ -0.25
PRPF39-203ENST00000477626 CBFA2T2O43439 604 aa13.46□□□□□ -0.25
PRPF39-203ENST00000477626 CACNB1Q02641 598 aaPredicted RBP13.46□□□□□ -0.25
PRPF39-203ENST00000477626 TAS1R3Q7RTX0 852 aa13.46□□□□□ -0.25
PRPF39-203ENST00000477626 CCDC60Q8IWA6 550 aaPredicted RBP13.46□□□□□ -0.25
PRPF39-203ENST00000477626 C12orf56Q8IXR9 622 aa13.46□□□□□ -0.25
PRPF39-203ENST00000477626 CEP63Q96MT8 703 aa13.46□□□□□ -0.25
PRPF39-203ENST00000477626 CTAGE1Q96RT6 745 aa13.46□□□□□ -0.25
PRPF39-203ENST00000477626 NIFKQ9BYG3 293 aaKnown RBP13.46□□□□□ -0.25
PRPF39-203ENST00000477626 ANKEF1Q9NU02 776 aa13.46□□□□□ -0.25
PRPF39-203ENST00000477626 USP20Q9Y2K6 914 aa13.46□□□□□ -0.25
PRPF39-203ENST00000477626 PSMA7O14818 248 aa13.46□□□□□ -0.26
PRPF39-203ENST00000477626 UBA1P22314 1058 aaKnown RBP13.46□□□□□ -0.26
PRPF39-203ENST00000477626 COPB2P35606 906 aa13.46□□□□□ -0.26
PRPF39-203ENST00000477626 LRRC41Q15345 812 aa13.46□□□□□ -0.26
PRPF39-203ENST00000477626 TAPT1Q6NXT6 567 aa13.46□□□□□ -0.26
PRPF39-203ENST00000477626 FILIP1Q7Z7B0 1213 aa13.46□□□□□ -0.26
PRPF39-203ENST00000477626 ZNF467Q7Z7K2 595 aaPredicted RBP13.46□□□□□ -0.26
PRPF39-203ENST00000477626 RASAL3Q86YV0 1011 aa13.46□□□□□ -0.26
PRPF39-203ENST00000477626 SLC9A9Q8IVB4 645 aa13.46□□□□□ -0.26
PRPF39-203ENST00000477626 CCDC150Q8NCX0 1101 aa13.46□□□□□ -0.26
PRPF39-203ENST00000477626 SRRTQ9BXP5 876 aaKnown RBP13.46□□□□□ -0.26
PRPF39-203ENST00000477626 A0A1W2PQJ5 194 aa13.45□□□□□ -0.26
PRPF39-203ENST00000477626 BICDL2A1A5D9 508 aa13.45□□□□□ -0.26
PRPF39-203ENST00000477626 TMEM150BA6NC51 233 aa13.45□□□□□ -0.26
PRPF39-203ENST00000477626 OFD1O75665 1012 aa13.45□□□□□ -0.26
PRPF39-203ENST00000477626 QARSP47897 775 aaKnown RBP13.45□□□□□ -0.26
PRPF39-203ENST00000477626 HSP90AA4PQ58FG1 418 aa13.45□□□□□ -0.26
PRPF39-203ENST00000477626 TMEM63BQ5T3F8 832 aa13.45□□□□□ -0.26
PRPF39-203ENST00000477626 KLHL10Q6JEL2 608 aa13.45□□□□□ -0.26
PRPF39-203ENST00000477626 ANP32BQ92688 251 aaKnown RBP13.45□□□□□ -0.26
PRPF39-203ENST00000477626 EMID1Q96A84 441 aaPredicted RBP13.45□□□□□ -0.26
PRPF39-203ENST00000477626 ZSWIM4Q9H7M6 989 aa13.45□□□□□ -0.26
PRPF39-203ENST00000477626 EPHB6O15197 1021 aa13.45□□□□□ -0.26
PRPF39-203ENST00000477626 MFAP3LO75121 409 aa13.45□□□□□ -0.26
PRPF39-203ENST00000477626 RTP1P59025 263 aa13.45□□□□□ -0.26
PRPF39-203ENST00000477626 GTF2BQ00403 316 aa13.45□□□□□ -0.26
PRPF39-203ENST00000477626 GRB14Q14449 540 aa13.45□□□□□ -0.26
PRPF39-203ENST00000477626 PPP4R3CPQ6ZMV5 832 aa13.45□□□□□ -0.26
PRPF39-203ENST00000477626 TMC6Q7Z403 805 aa13.45□□□□□ -0.26
PRPF39-203ENST00000477626 REXO1L1PQ8IX06 675 aa13.45□□□□□ -0.26
PRPF39-203ENST00000477626 GTF3C2Q8WUA4 911 aaPredicted RBP13.45□□□□□ -0.26
PRPF39-203ENST00000477626 CNOT6LQ96LI5 555 aaKnown RBP13.45□□□□□ -0.26
PRPF39-203ENST00000477626 ZCCHC17Q9NP64 241 aaKnown RBP13.45□□□□□ -0.26
PRPF39-203ENST00000477626 SEL1LQ9UBV2 794 aa13.45□□□□□ -0.26
PRPF39-203ENST00000477626 ADGRA3Q8IWK6 1321 aa13.45□□□□□ -0.26
PRPF39-203ENST00000477626 GAP43P17677 238 aa13.44□□□□□ -0.26
PRPF39-203ENST00000477626 YWHABP31946 246 aaKnown RBP13.44□□□□□ -0.26
PRPF39-203ENST00000477626 RBL2Q08999 1139 aa13.44□□□□□ -0.26
PRPF39-203ENST00000477626 GOLGA8FQ08AF8 430 aa13.44□□□□□ -0.26
PRPF39-203ENST00000477626 GOLGA8DPQ0D2H9 430 aa13.44□□□□□ -0.26
PRPF39-203ENST00000477626 C1orf220Q5T0J3 134 aa13.44□□□□□ -0.26
PRPF39-203ENST00000477626 MYOCDQ8IZQ8 938 aa13.44□□□□□ -0.26
PRPF39-203ENST00000477626 BSNDQ8WZ55 320 aa13.44□□□□□ -0.26
PRPF39-203ENST00000477626 TIPINQ9BVW5 301 aa13.44□□□□□ -0.26
PRPF39-203ENST00000477626 MROH8Q9H579 483 aa13.44□□□□□ -0.26
PRPF39-203ENST00000477626 NENFQ9UMX5 172 aa13.44□□□□□ -0.26
PRPF39-203ENST00000477626 WDR64B1ANS9 1081 aa13.44□□□□□ -0.26
PRPF39-203ENST00000477626 PDXKO00764 312 aa13.44□□□□□ -0.26
PRPF39-203ENST00000477626 PSMC5P62195 406 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms