RNA–Protein interactions for RNA: ENST00000476964.5

SOX2-OT-207, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 606 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-207ENST00000476964 LILRA6Q6PI73 481 aa6.5□□□□□ -1.37
SOX2-OT-207ENST00000476964 NIM1KQ8IY84 436 aa6.5□□□□□ -1.37
SOX2-OT-207ENST00000476964 ASB15Q8WXK1 588 aa6.5□□□□□ -1.37
SOX2-OT-207ENST00000476964 LCORQ96JN0 433 aaPredicted RBP6.5□□□□□ -1.37
SOX2-OT-207ENST00000476964 AMNQ9BXJ7 453 aa6.5□□□□□ -1.37
SOX2-OT-207ENST00000476964 TMEM168Q9H0V1 697 aa6.5□□□□□ -1.37
SOX2-OT-207ENST00000476964 PLAAQ9Y263 795 aa6.5□□□□□ -1.37
SOX2-OT-207ENST00000476964 TMA7Q9Y2S6 64 aaKnown RBP6.5□□□□□ -1.37
SOX2-OT-207ENST00000476964 PRAMEF25A6NGN4 478 aa6.49□□□□□ -1.37
SOX2-OT-207ENST00000476964 GLRBP48167 497 aa6.49□□□□□ -1.37
SOX2-OT-207ENST00000476964 CTSWP56202 376 aa6.49□□□□□ -1.37
SOX2-OT-207ENST00000476964 IRF9Q00978 393 aa6.49□□□□□ -1.37
SOX2-OT-207ENST00000476964 C21orf62-AS1Q17RA5 79 aa6.49□□□□□ -1.37
SOX2-OT-207ENST00000476964 CFAP100Q494V2 611 aa6.49□□□□□ -1.37
SOX2-OT-207ENST00000476964 CATSPEREQ5SY80 951 aa6.49□□□□□ -1.37
SOX2-OT-207ENST00000476964 PIK3R6Q5UE93 754 aa6.49□□□□□ -1.37
SOX2-OT-207ENST00000476964 TRMT10BQ6PF06 316 aaKnown RBP6.49□□□□□ -1.37
SOX2-OT-207ENST00000476964 LRRTM3Q86VH5 581 aa6.49□□□□□ -1.37
SOX2-OT-207ENST00000476964 NUDT10Q8NFP7 164 aa6.49□□□□□ -1.37
SOX2-OT-207ENST00000476964 NUDT11Q96G61 164 aa6.49□□□□□ -1.37
SOX2-OT-207ENST00000476964 KATNBL1Q9H079 304 aa6.49□□□□□ -1.37
SOX2-OT-207ENST00000476964 INCENPQ9NQS7 918 aa6.49□□□□□ -1.37
SOX2-OT-207ENST00000476964 ARHGAP28Q9P2N2 729 aa6.49□□□□□ -1.37
SOX2-OT-207ENST00000476964 FTSJ1Q9UET6 329 aa6.49□□□□□ -1.37
SOX2-OT-207ENST00000476964 ADAM29Q9UKF5 820 aa6.49□□□□□ -1.37
SOX2-OT-207ENST00000476964 ASB1Q9Y576 335 aa6.49□□□□□ -1.37
SOX2-OT-207ENST00000476964 PTPDC1A2A3K4 754 aa6.48□□□□□ -1.37
SOX2-OT-207ENST00000476964 GOLGA6L22H0YM25 854 aa6.48□□□□□ -1.37
SOX2-OT-207ENST00000476964 FOXP2O15409 715 aa6.48□□□□□ -1.37
SOX2-OT-207ENST00000476964 PRICKLE3O43900 615 aaPredicted RBP6.48□□□□□ -1.37
SOX2-OT-207ENST00000476964 FBXO21O94952 628 aa6.48□□□□□ -1.37
SOX2-OT-207ENST00000476964 MMEP08473 750 aa6.48□□□□□ -1.37
SOX2-OT-207ENST00000476964 CREB3L3Q68CJ9 461 aa6.48□□□□□ -1.37
SOX2-OT-207ENST00000476964 DPP8Q6V1X1 898 aaPredicted RBP6.48□□□□□ -1.37
SOX2-OT-207ENST00000476964 CXXC5Q7LFL8 322 aaKnown RBP6.48□□□□□ -1.37
SOX2-OT-207ENST00000476964 KLHL36Q8N4N3 616 aa6.48□□□□□ -1.37
SOX2-OT-207ENST00000476964 CXorf38Q8TB03 319 aa6.48□□□□□ -1.37
SOX2-OT-207ENST00000476964 FOXRED1Q96CU9 486 aaPredicted RBP6.48□□□□□ -1.37
SOX2-OT-207ENST00000476964 AJUBAQ96IF1 538 aa6.48□□□□□ -1.37
SOX2-OT-207ENST00000476964 TACO1Q9BSH4 297 aaKnown RBP6.48□□□□□ -1.37
SOX2-OT-207ENST00000476964 ADAM7Q9H2U9 754 aa6.48□□□□□ -1.37
SOX2-OT-207ENST00000476964 CABP5Q9NP86 173 aa6.48□□□□□ -1.37
SOX2-OT-207ENST00000476964 USP40Q9NVE5 1235 aa6.48□□□□□ -1.37
SOX2-OT-207ENST00000476964 ANKRD62A6NC57 917 aa6.47□□□□□ -1.37
SOX2-OT-207ENST00000476964 B4GALT3O60512 393 aa6.47□□□□□ -1.37
SOX2-OT-207ENST00000476964 HIP1RO75146 1068 aa6.47□□□□□ -1.37
SOX2-OT-207ENST00000476964 CYP1A1P04798 512 aaPredicted RBP6.47□□□□□ -1.37
SOX2-OT-207ENST00000476964 MC4RP32245 332 aa6.47□□□□□ -1.37
SOX2-OT-207ENST00000476964 FNTBP49356 437 aa6.47□□□□□ -1.37
SOX2-OT-207ENST00000476964 NFATC3Q12968 1075 aa6.47□□□□□ -1.37
SOX2-OT-207ENST00000476964 Q6ZUG5 572 aa6.47□□□□□ -1.37
SOX2-OT-207ENST00000476964 FAM124AQ86V42 546 aa6.47□□□□□ -1.37
SOX2-OT-207ENST00000476964 GBP4Q96PP9 640 aa6.47□□□□□ -1.37
SOX2-OT-207ENST00000476964 BTBD2Q9BX70 525 aa6.47□□□□□ -1.37
SOX2-OT-207ENST00000476964 A0A087X0B3 334 aa6.46□□□□□ -1.38
SOX2-OT-207ENST00000476964 H0Y858 1186 aa6.46□□□□□ -1.38
SOX2-OT-207ENST00000476964 F2P00734 622 aa6.46□□□□□ -1.38
SOX2-OT-207ENST00000476964 NCLP19338 710 aaKnown RBP6.46□□□□□ -1.38
SOX2-OT-207ENST00000476964 HSD3B2P26439 372 aa6.46□□□□□ -1.38
SOX2-OT-207ENST00000476964 ECE1P42892 770 aa6.46□□□□□ -1.38
SOX2-OT-207ENST00000476964 NFIXQ14938 502 aa6.46□□□□□ -1.38
SOX2-OT-207ENST00000476964 TMEM132BQ14DG7 1078 aa6.46□□□□□ -1.38
SOX2-OT-207ENST00000476964 RTN4RL1Q86UN2 441 aaPredicted RBP6.46□□□□□ -1.38
SOX2-OT-207ENST00000476964 DHX37Q8IY37 1157 aaKnown RBP6.46□□□□□ -1.38
SOX2-OT-207ENST00000476964 LGI4Q8N135 537 aa6.46□□□□□ -1.38
SOX2-OT-207ENST00000476964 RELTQ969Z4 430 aa6.46□□□□□ -1.38
SOX2-OT-207ENST00000476964 ACSS2Q9NR19 701 aa6.46□□□□□ -1.38
SOX2-OT-207ENST00000476964 UCKL1Q9NWZ5 548 aa6.46□□□□□ -1.38
SOX2-OT-207ENST00000476964 FOXD2O60548 495 aaPredicted RBP6.45□□□□□ -1.38
SOX2-OT-207ENST00000476964 CYP17A1P05093 508 aa6.45□□□□□ -1.38
SOX2-OT-207ENST00000476964 POLD1P28340 1107 aa6.45□□□□□ -1.38
SOX2-OT-207ENST00000476964 KIF11P52732 1056 aa6.45□□□□□ -1.38
SOX2-OT-207ENST00000476964 GYS2P54840 703 aa6.45□□□□□ -1.38
SOX2-OT-207ENST00000476964 IL13RA1P78552 427 aa6.45□□□□□ -1.38
SOX2-OT-207ENST00000476964 DSG1Q02413 1049 aa6.45□□□□□ -1.38
SOX2-OT-207ENST00000476964 TOP3AQ13472 1001 aaPredicted RBP6.45□□□□□ -1.38
SOX2-OT-207ENST00000476964 PCBP1Q15365 356 aaKnown RBP eCLIP6.45□□□□□ -1.38
SOX2-OT-207ENST00000476964 LCE1DQ5T752 114 aa6.45□□□□□ -1.38
SOX2-OT-207ENST00000476964 KANK2Q63ZY3 851 aa6.45□□□□□ -1.38
SOX2-OT-207ENST00000476964 BORAQ6PGQ7 559 aa6.45□□□□□ -1.38
SOX2-OT-207ENST00000476964 FERMT3Q86UX7 667 aa6.45□□□□□ -1.38
SOX2-OT-207ENST00000476964 MFSD3Q96ES6 412 aa6.45□□□□□ -1.38
SOX2-OT-207ENST00000476964 C16orf92Q96LL3 132 aa6.45□□□□□ -1.38
SOX2-OT-207ENST00000476964 TARS2Q9BW92 718 aaKnown RBP6.45□□□□□ -1.38
SOX2-OT-207ENST00000476964 BARX1Q9HBU1 254 aaPredicted RBP6.45□□□□□ -1.38
SOX2-OT-207ENST00000476964 INVSQ9Y283 1065 aa6.45□□□□□ -1.38
SOX2-OT-207ENST00000476964 PRAMEF22A3QJZ6 481 aa6.44□□□□□ -1.38
SOX2-OT-207ENST00000476964 CUTAO60888 179 aa6.44□□□□□ -1.38
SOX2-OT-207ENST00000476964 MAFO75444 373 aaPredicted RBP6.44□□□□□ -1.38
SOX2-OT-207ENST00000476964 CNR2P34972 360 aa6.44□□□□□ -1.38
SOX2-OT-207ENST00000476964 NEK4P51957 841 aa6.44□□□□□ -1.38
SOX2-OT-207ENST00000476964 SDE2Q6IQ49 451 aa6.44□□□□□ -1.38
SOX2-OT-207ENST00000476964 LRSAM1Q6UWE0 723 aa6.44□□□□□ -1.38
SOX2-OT-207ENST00000476964 REXO1L1PQ8IX06 675 aa6.44□□□□□ -1.38
SOX2-OT-207ENST00000476964 PPM1KQ8N3J5 372 aa6.44□□□□□ -1.38
SOX2-OT-207ENST00000476964 KIAA1958Q8N8K9 716 aa6.44□□□□□ -1.38
SOX2-OT-207ENST00000476964 RBM15Q96T37 977 aaKnown RBP eCLIP6.44□□□□□ -1.38
SOX2-OT-207ENST00000476964 OR10A5Q9H207 317 aa6.44□□□□□ -1.38
SOX2-OT-207ENST00000476964 SPO11Q9Y5K1 396 aa6.44□□□□□ -1.38
SOX2-OT-207ENST00000476964 GSG1L2A8MUP6 293 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms