RNA–Protein interactions for RNA: ENST00000476664.1

LRCH3-215, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 227 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-215ENST00000476664 ZBTB34Q8NCN2 500 aa8.13□□□□□ -1.11
LRCH3-215ENST00000476664 FAM156AQ8NDB6 213 aa8.13□□□□□ -1.11
LRCH3-215ENST00000476664 CXorf38Q8TB03 319 aa8.13□□□□□ -1.11
LRCH3-215ENST00000476664 SSH1Q8WYL5 1049 aa8.13□□□□□ -1.11
LRCH3-215ENST00000476664 ALG1Q9BT22 464 aa8.13□□□□□ -1.11
LRCH3-215ENST00000476664 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.13□□□□□ -1.11
LRCH3-215ENST00000476664 HCN2Q9UL51 889 aa8.13□□□□□ -1.11
LRCH3-215ENST00000476664 SLC6A14Q9UN76 642 aa8.13□□□□□ -1.11
LRCH3-215ENST00000476664 PHF24Q9UPV7 400 aa8.13□□□□□ -1.11
LRCH3-215ENST00000476664 COQ6Q9Y2Z9 468 aa8.13□□□□□ -1.11
LRCH3-215ENST00000476664 C10orf71Q711Q0 1435 aa8.12□□□□□ -1.11
LRCH3-215ENST00000476664 RASA4BC9J798 803 aa8.12□□□□□ -1.11
LRCH3-215ENST00000476664 SHOXO15266 292 aa8.12□□□□□ -1.11
LRCH3-215ENST00000476664 RASA4O43374 803 aa8.12□□□□□ -1.11
LRCH3-215ENST00000476664 SIN3BO75182 1162 aa8.12□□□□□ -1.11
LRCH3-215ENST00000476664 VDRP11473 427 aa8.12□□□□□ -1.11
LRCH3-215ENST00000476664 CHKAP35790 457 aa8.12□□□□□ -1.11
LRCH3-215ENST00000476664 AMPD2Q01433 879 aa8.12□□□□□ -1.11
LRCH3-215ENST00000476664 PRSS53Q2L4Q9 553 aa8.12□□□□□ -1.11
LRCH3-215ENST00000476664 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.12□□□□□ -1.11
LRCH3-215ENST00000476664 FAM47CQ5HY64 1035 aa8.12□□□□□ -1.11
LRCH3-215ENST00000476664 GDF6Q6KF10 455 aaPredicted RBP8.12□□□□□ -1.11
LRCH3-215ENST00000476664 DARS2Q6PI48 645 aaKnown RBP8.12□□□□□ -1.11
LRCH3-215ENST00000476664 SYT9Q86SS6 491 aa8.12□□□□□ -1.11
LRCH3-215ENST00000476664 RASSF3Q86WH2 238 aa8.12□□□□□ -1.11
LRCH3-215ENST00000476664 SYTL5Q8TDW5 730 aaPredicted RBP8.12□□□□□ -1.11
LRCH3-215ENST00000476664 PANK1Q8TE04 598 aa8.12□□□□□ -1.11
LRCH3-215ENST00000476664 DIS3LQ8TF46 1054 aaKnown RBP8.12□□□□□ -1.11
LRCH3-215ENST00000476664 TTC9Q92623 222 aa8.12□□□□□ -1.11
LRCH3-215ENST00000476664 HPS3Q969F9 1004 aa8.12□□□□□ -1.11
LRCH3-215ENST00000476664 WDR89Q96FK6 387 aaPredicted RBP8.12□□□□□ -1.11
LRCH3-215ENST00000476664 PPM1MQ96MI6 270 aa8.12□□□□□ -1.11
LRCH3-215ENST00000476664 MAP3K14Q99558 947 aa8.12□□□□□ -1.11
LRCH3-215ENST00000476664 ACO2Q99798 780 aaKnown RBP8.12□□□□□ -1.11
LRCH3-215ENST00000476664 KRTAP3-3Q9BYR6 98 aa8.12□□□□□ -1.11
LRCH3-215ENST00000476664 KRTAP3-2Q9BYR7 98 aa8.12□□□□□ -1.11
LRCH3-215ENST00000476664 WDR12Q9GZL7 423 aaKnown RBP8.12□□□□□ -1.11
LRCH3-215ENST00000476664 MYLK2Q9H1R3 596 aa8.12□□□□□ -1.11
LRCH3-215ENST00000476664 LGR6Q9HBX8 967 aa8.12□□□□□ -1.11
LRCH3-215ENST00000476664 AGO4Q9HCK5 861 aaKnown RBP8.12□□□□□ -1.11
LRCH3-215ENST00000476664 RASSF1Q9NS23 344 aa8.12□□□□□ -1.11
LRCH3-215ENST00000476664 FNIP2Q9P278 1114 aa8.12□□□□□ -1.11
LRCH3-215ENST00000476664 NOL7Q9UMY1 257 aaKnown RBP8.12□□□□□ -1.11
LRCH3-215ENST00000476664 PCDHB12Q9Y5F1 795 aa8.12□□□□□ -1.11
LRCH3-215ENST00000476664 BCL9O00512 1426 aa8.12□□□□□ -1.11
LRCH3-215ENST00000476664 MYOM3Q5VTT5 1437 aa8.12□□□□□ -1.11
LRCH3-215ENST00000476664 IGSF1Q8N6C5 1336 aa8.11□□□□□ -1.11
LRCH3-215ENST00000476664 SYNGAP1Q96PV0 1343 aa8.11□□□□□ -1.11
LRCH3-215ENST00000476664 GOLGA8AA7E2F4 631 aa8.11□□□□□ -1.11
LRCH3-215ENST00000476664 GOLGA8BA8MQT2 603 aa8.11□□□□□ -1.11
LRCH3-215ENST00000476664 PRSS47A8MTI9 375 aa8.11□□□□□ -1.11
LRCH3-215ENST00000476664 J3KRW8 73 aa8.11□□□□□ -1.11
LRCH3-215ENST00000476664 GSTA4O15217 222 aa8.11□□□□□ -1.11
LRCH3-215ENST00000476664 SNX2O60749 519 aa8.11□□□□□ -1.11
LRCH3-215ENST00000476664 CKMP06732 381 aa8.11□□□□□ -1.11
LRCH3-215ENST00000476664 HSPA8P11142 646 aaKnown RBP8.11□□□□□ -1.11
LRCH3-215ENST00000476664 FGFR3P22607 806 aa8.11□□□□□ -1.11
LRCH3-215ENST00000476664 MECP2P51608 486 aaKnown RBP8.11□□□□□ -1.11
LRCH3-215ENST00000476664 GPSM2P81274 684 aa8.11□□□□□ -1.11
LRCH3-215ENST00000476664 TNFAIP2Q03169 654 aa8.11□□□□□ -1.11
LRCH3-215ENST00000476664 PAK1Q13153 545 aa8.11□□□□□ -1.11
LRCH3-215ENST00000476664 SEMA5AQ13591 1074 aa8.11□□□□□ -1.11
LRCH3-215ENST00000476664 PPP2R5DQ14738 602 aa8.11□□□□□ -1.11
LRCH3-215ENST00000476664 KIAA0753Q2KHM9 967 aa8.11□□□□□ -1.11
LRCH3-215ENST00000476664 CCDC96Q2M329 555 aa8.11□□□□□ -1.11
LRCH3-215ENST00000476664 NBPF9Q3BBW0 867 aa8.11□□□□□ -1.11
LRCH3-215ENST00000476664 MZT2BQ6NZ67 158 aa8.11□□□□□ -1.11
LRCH3-215ENST00000476664 CFAP161Q6P656 301 aa8.11□□□□□ -1.11
LRCH3-215ENST00000476664 TLDC1Q6P9B6 456 aa8.11□□□□□ -1.11
LRCH3-215ENST00000476664 TTLL7Q6ZT98 887 aa8.11□□□□□ -1.11
LRCH3-215ENST00000476664 CDC37L1Q7L3B6 337 aa8.11□□□□□ -1.11
LRCH3-215ENST00000476664 DPP9Q86TI2 863 aa8.11□□□□□ -1.11
LRCH3-215ENST00000476664 MARCH10Q8NA82 808 aaPredicted RBP8.11□□□□□ -1.11
LRCH3-215ENST00000476664 PHF20Q9BVI0 1012 aa8.11□□□□□ -1.11
LRCH3-215ENST00000476664 RSPH9Q9H1X1 276 aaPredicted RBP8.11□□□□□ -1.11
LRCH3-215ENST00000476664 TMEM60Q9H2L4 133 aa8.11□□□□□ -1.11
LRCH3-215ENST00000476664 NOL6Q9H6R4 1146 aaKnown RBP8.11□□□□□ -1.11
LRCH3-215ENST00000476664 RRAGCQ9HB90 399 aa8.11□□□□□ -1.11
LRCH3-215ENST00000476664 OXSMQ9NWU1 459 aa8.11□□□□□ -1.11
LRCH3-215ENST00000476664 FBXL21Q9UKT6 434 aa8.11□□□□□ -1.11
LRCH3-215ENST00000476664 SF3B6Q9Y3B4 125 aaKnown RBP8.11□□□□□ -1.11
LRCH3-215ENST00000476664 PCDHGC5Q9Y5F6 944 aa8.11□□□□□ -1.11
LRCH3-215ENST00000476664 LRRFIP2Q9Y608 721 aaKnown RBP8.11□□□□□ -1.11
LRCH3-215ENST00000476664 IFT172Q9UG01 1749 aa8.11□□□□□ -1.11
LRCH3-215ENST00000476664 PXDNLA1KZ92 1463 aa8.11□□□□□ -1.11
LRCH3-215ENST00000476664 TNRC6CQ9HCJ0 1690 aaKnown RBP8.11□□□□□ -1.11
LRCH3-215ENST00000476664 KCPQ6ZWJ8 1503 aa8.1□□□□□ -1.11
LRCH3-215ENST00000476664 ITIH2P19823 946 aa8.1□□□□□ -1.11
LRCH3-215ENST00000476664 CAP2P40123 477 aa8.1□□□□□ -1.11
LRCH3-215ENST00000476664 AFF1P51825 1210 aaKnown RBP8.1□□□□□ -1.11
LRCH3-215ENST00000476664 ADKP55263 362 aaKnown RBP8.1□□□□□ -1.11
LRCH3-215ENST00000476664 ZNF445P59923 1031 aa8.1□□□□□ -1.11
LRCH3-215ENST00000476664 ID3Q02535 119 aa8.1□□□□□ -1.11
LRCH3-215ENST00000476664 LLGL1Q15334 1064 aa8.1□□□□□ -1.11
LRCH3-215ENST00000476664 TOMM20Q15388 145 aa8.1□□□□□ -1.11
LRCH3-215ENST00000476664 LILRA6Q6PI73 481 aa8.1□□□□□ -1.11
LRCH3-215ENST00000476664 WAPLQ7Z5K2 1190 aa8.1□□□□□ -1.11
LRCH3-215ENST00000476664 ANKRD18AQ8IVF6 992 aa8.1□□□□□ -1.11
LRCH3-215ENST00000476664 PPIL6Q8IXY8 311 aa8.1□□□□□ -1.11
LRCH3-215ENST00000476664 LMBR1Q8WVP7 490 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms